Triplophysa dalaica: 130420067
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Entry
130420067 CDS
T09616
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130420067 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130420067 (exosc2)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130420067 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
130420067 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
130420067
NCBI-ProteinID:
XP_056603123
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Position
4:complement(429811..433053)
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AA seq
295 aa
AA seq
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MAAEMRLPAVHKFISLPTTTQSQDDKQLVVPGEVITSDTGFMRGHGTYMDEDRLTASVAG
EVERVNKLICVKPLKTRFNGEVGDVIVGRVTEVQQKRWKVETNSRLDSVLLLSSVNLPGG
ELRRRSAEDELAMRDYLQEGDLISAEVQSIFSDGALSLHTRSLKYGKLGQGVLVQVSPSL
VKRQKTHFHNLLCGASIILGNNGYVWLYPTPDQQDGEAGGYFTSLEPVSLSDREVISRLR
NCLLALSAHKVLLYDTSVLYCYESSLSHQIKDILKPEVMEEIVLETRQRLIEHEC
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaatgagattaccggcagttcacaaattcatttcattaccaacaacaaca
caatcacaggatgacaaacaactggtggtccctggagaagtgatcacatctgacactgga
tttatgagaggtcatggcacatacatggatgaagacagactcacagcatcagttgctgga
gaagtggagcgagtgaataaactcatctgcgtgaaacctctgaagaccagattcaacggt
gaagttggtgatgtgattgtcggcagggttacggaggtgcagcagaaacgctggaaagtg
gaaacaaactctcggctggattctgtgttgctcctctcttcagtgaatttacctggagga
gaactgagacgtcgatcagctgaggacgagctggccatgagagattatcttcaggaggga
gatctcatcagtgcagaggttcagtccatcttttctgacggcgctctttctctgcacact
cgcagtttgaagtatggaaagttgggtcaaggtgtgcttgtacaggtttcaccatctcta
gtgaaaagacagaaaacacatttccacaatctactgtgtggtgcctccatcatcctggga
aacaatggttacgtgtggctgtatcccacccccgatcagcaggatggagaggccggagga
tatttcaccagcttagagcccgtgtccctgtcagatcgagaggtgatttctcgattgagg
aattgtttgttggctctgtcagctcataaggttttgctgtatgacacaagtgtgctttac
tgctatgagtcttctctttcacatcagattaaagatatcctgaaaccagaggtgatggag
gagattgttctggaaacgcgacagcgcctcattgagcatgaatgctaa
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