Triplophysa dalaica: 130420146
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Entry
130420146 CDS
T09616
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130420146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130420146
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130420146
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130420146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
FANCL_C
zf-C3H2C3
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
130420146
NCBI-ProteinID:
XP_056603238
LinkDB
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Position
4:complement(15468202..15545456)
Genome browser
AA seq
836 aa
AA seq
DB search
MRVPVWRLAGLWPWLLMATLQVALGHTGLELAAAVESERSAPKAVIKVTLLKQEPTSRPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDERQESIFISIVKLESPESKVPQCQPLLD
KARLALQRGAQAVIFDITDDGSAAQELRDSGSLPRPVVLVKSTDAEELMGLVNKNEEAMV
LIDIMMETPKWPHYDVGILLTVALAVLAIIMIFALRFRCRSNRTWDSVHQQTMRAISRLE
TRTYTSPGCSGSQGSHGALGSNSSSGSSPVCAICLEEFMDGQDLRIISCAHEFHRECVDP
WLLQHRTCPLCMHNIMGKQPQGPEVTSRQPQRSRLPPPPPDHHSQAFLLPHHYSNPHPHP
QHQIPFSMRHHYPRTPSGPLPQFGHYGNSPPLHPRTLRCFPSTPLSASCVYHLGPEARHG
RPHRTGGHRCRAVGHHYGPRRPCTRCPSGVPRNPSGSRSSPANHAAHHHVPRGGGTHGRQ
DDGSCSGGSYRTDRSGYLPDVPVSDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRSS
LSSDYDPFVYCGPGRGSAEATERPRSLDSVVNRSGNGPGVDGNAMCSEEQQQQVAVFSHV
HYHRHRHHYYEEGEVSQGPGRGSDEEQGAAGGPSNAAKDKDSTGCQMQHLSCNCPKTDMG
SRGFEDTDPSGHSVVVPSSSFTSPSPSCFHKGTAWPTRRKTTSCTLEATPGPSPVVHFHQ
NLDLQEDCSLHIHYGQGAGSYCYSPPPDVAPTLLPVPLILDSTGMTDWPCCGGAHVVWQK
QVQQACSEPQLQNSASAVDRPLCRAHHRPGDELPRDICLYCQTLHNSQGSEEESGV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgtggcgattggccgggctctggccgtggctactcatggccaccttg
caagtggcgttgggccacacgggtttggaactggctgctgccgtggagtccgaaaggtcg
gcacccaaagccgtgatcaaagtgaccctgttgaagcaggagcccaccagcaggcccatc
acactggagggggtgtttgccggaggcagtgctggctatgccgagggaaaactgatgcag
tctcacccactgtctctgtgtaacaccagtgaggacgagcgacaggagagcatcttcatc
agcatcgtcaaactcgagagtccggagagcaaagtgccacagtgtcaaccgctgctggac
aaagctagattggctcttcagagaggggctcaggctgttatctttgatattacagatgat
ggcagtgctgctcaggaactgcgtgactctggttctctgccgcggccggtcgtgttggtg
aagtcaacagacgctgaagaattgatgggtctggtcaataagaacgaggaagccatggtg
ctgatagacatcatgatggaaactcctaaatggcctcactatgatgttggcattctcctg
accgtcgctctggctgtgttggccatcatcatgatctttgctctgcgattccgctgcaga
tccaacagaacctgggactccgtgcaccagcagaccatgagagccatcagcagattggag
acccgcacgtatacgtctccaggctgcagcggatcccagggttcccatggagctctgggg
tccaacagcagctccggatccagcccagtctgtgccatctgtctcgaggagttcatggat
ggccaggatttgaggattatctcctgtgctcatgaatttcatagggagtgtgtggacccg
tggctcctgcagcaccgcacatgcccgctgtgcatgcacaacatcatgggtaaacagcct
cagggtccagaggtgacatcccgtcagccacagagatcccgcctcccgccccctccaccg
gaccaccacagccaggcctttctcctccctcatcactattcaaacccacaccctcacccc
cagcaccaaatccccttctccatgcggcatcactatccccgcaccccctctgggccatta
ccccagtttggccattatggcaactctcccccactccatccccgcaccctacgatgtttt
cccagcacaccgttgagcgctagttgcgtttaccatctcggcccggaagcccgtcacgga
cgcccgcacagaacaggagggcacaggtgccgggccgtagggcatcactacggtcctaga
cggccgtgcacccgctgcccctcaggggtcccgcggaacccttcgggctcccgttcgtca
cccgcaaaccacgcggcccaccatcacgtcccacgcggtggaggcacgcacggtcgccaa
gacgacggcagctgctcaggagggagctaccgcacggatcgcagcggttaccttcccgac
gtgccagttagcgattccagttcgggatcgtgccacggctcgtccagtgactcagttcta
aattgtacggacatcagcctgcagggcgtgtacggcagctggtccacgtttcgcagttcg
ctcagtagtgactatgacccgtttgtgtattgcgggccgggcagagggagtgcagaggcc
acggaaagacctcgatctctggactcggtagtgaaccgctcgggaaacggacctggcgtt
gatgggaacgcgatgtgctcggaggagcagcaacaacaggtggctgttttcagtcacgtc
cactatcacagacatagacaccactattatgaggagggagaggtgagtcaagggccaggc
cggggctcggatgaggaacagggggcagcgggtggcccttctaatgcagctaaagacaaa
gactctacagggtgtcagatgcagcatctttcatgcaactgccccaaaacagacatgggt
tcgaggggttttgaggacacagacccctccggccactccgtggtcgtaccttcctcttct
ttcacctctccgtcaccctcttgtttccacaagggcacagcatggcccaccagacggaaa
acaaccagctgtacgttggaagcgactcccggaccttcgccggttgttcatttccatcaa
aacttggaccttcaagaggattgtagccttcatattcactacggacagggagcgggaagc
tattgctactcgcctcctccagatgtggcccccacgctgctgccggttcctctgattttg
gactctacgggaatgacggactggccgtgttgtgggggggctcacgtggtgtggcagaaa
caggttcagcaggcctgttcagagcctcagcttcaaaattctgcctctgcggtggacaga
cccctgtgtagggctcatcacaggccaggggacgaacttcctagagacatctgcctgtac
tgccaaactttacacaatagtcaggggtcagaggaagagtctggtgtttga
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