Triplophysa dalaica: 130420179
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Entry
130420179 CDS
T09616
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130420179 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130420179 (lrrc4cb)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
NGL family
130420179 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
LRR_14
Ig_3
ig
Ig_2
LRR_9
V-set
DUF7617
LRR_RPS2
LRRNT
Sp38
Ig_6
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
130420179
NCBI-ProteinID:
XP_056603304
LinkDB
All DBs
Position
1:complement(11020150..11064164)
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AA seq
631 aa
AA seq
DB search
MLNKMTSYHQRQMLRGPRWKGAWFDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRALKDVPDGISTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDL
GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTMIQPSSF
KGLIHLQKLWMMHAQVQTIERNSLDDLQSLRELNLAHNNLSFLPHDLFTPLRHLQRVHLH
HNPWNCNCDILWLSWWLRETVPTNTSCCARCNSPLSLKGRYIGELDQSYFQCYAPVIVDP
PADLNLTEGMAAELKCRTNSVTSVSWQTPNGSILTHGTLKMRISVQNDGTLNFTNITVQD
TGTYTCIVSNTLGNISASAVLNVTTVDNSGFSYFTTVTVETIETPNNGDSRTPVQPSFGW
ASSSTTRGTPIATERAYTLPVTEIDMDGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPSRSIEIINVNEELTRVPAMESHLNLPAVEHDHYKYYNSYKTDYN
HLATLSSLHSSAHEPLLIQASSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaaatgacctcttaccatcagcgccagatgttgagaggtcctagatggaaa
ggggcttggtttgaccccttgtttctcctgcttttagccctgcagttacttgtcgtcgct
ggattggtgcgagctcaaacctgtccatccgtatgttcctgcagcaaccaatttagtaag
gtcatctgtacacgcagggctctaaaggatgtccctgatggcatctccaccaatacacgg
tatctaaaccttcaggacaatcaaatacaagtgatcaaagtagacagtttcaagcatctc
cgacacctagaaattcttcagcttagcaggaaccacatccgcaacattgagattggcgcc
tttaatgggctgaccagccttaacactctggagctctttgacaatcgcctcacaaccatc
ccaaatggcgcctttgagtatctctcaaaactgaaggagctttggcttaggaataaccct
atcgagagcataccatctgatgccttcagtcgcttgccgtccctgcggaggttggatctg
ggggagctaaagcgtctctcctacatctcaagtggagcatttcagggattgagtaacctt
cgctacttgaacctgggcatgtgtaacctcaaagaggtccctaacatccagcccttgatt
cgcttggacgagttggaaatgtcggggaatcagctcaccatgatccaacccagttctttt
aagggcctcatccatcttcagaagctgtggatgatgcacgcccaggtccaaaccatagaa
cggaactccttggatgacctgcagtcgttaagagagctcaacctggcacacaacaacctc
tcctttttgccccatgatctcttcacgcctttgcgccacctgcagcgagtgcatttgcat
cacaatccttggaactgtaactgtgacattctttggctgagctggtggctgagagagact
gtcccgacgaacaccagctgctgtgcacgctgcaattcccctctcagcctcaaggggcgc
tacattggtgagctggaccagagctactttcagtgctatgccccggttattgttgaccca
ccagcggacctcaatttgactgaaggaatggcagcagagctcaaatgtcggacgaattca
gtgacctcggtcagctggcaaacaccaaatggctccatcttaacacacgggacgctcaag
atgcgcatctctgtccaaaatgatggaacgttaaacttcaccaacatcaccgtccaggac
acgggaacctacacttgcattgtaagcaacacgctgggcaacatttcagcttctgctgtc
ctcaatgtgaccaccgttgacaacagtggtttcagctattttacgacggtgaccgtagag
acaatagaaaccccaaacaatggggacagtaggacaccggtgcagccctcttttggctgg
gcttcatcctcaaccacaaggggaacacccatcgccacagagagggcgtacacccttcct
gtgactgagatagacatggatggggctctcaacggcttggaggaggtgatgaaaaccacc
aagatcatcatcggctgcttcgtggccatcacacttatggctgctgtcatgctcataata
ttctacaagatgcgcaagcagcatcaccagcaggatcacgatggaccgtcccgctccatt
gagatcatcaatgttaatgaggagctaacaagggttccagccatggagagtcacctgaat
cttccagctgttgagcatgatcattacaagtactataattcctacaaaactgattataac
cacttggccactctcagctctttgcatagttcggcgcatgaacctttacttattcaagcc
agctcaaaggataacgtacaggagacgcaaatttaa
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