Triplophysa dalaica: 130420225
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Entry
130420225 CDS
T09616
Symbol
arap1a
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130420225 (arap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130420225 (arap1a)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130420225 (arap1a)
Endosome - Golgi transport
Arf GTPase associated proteins
130420225 (arap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
130420225 (arap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
PH_8
PH_11
PH_9
PH_6
SOS1_NGEF_PH
RA
Motif
Other DBs
NCBI-GeneID:
130420225
NCBI-ProteinID:
XP_056603379
LinkDB
All DBs
Position
4:complement(16390438..16406948)
Genome browser
AA seq
1098 aa
AA seq
DB search
MAVKQQDLLRDMQKCFDQMKVEENKTETVSDRHRNESINIGCTEFPDNSEEVRSILKAGW
LEKTPPNSGVIFQRRWVQLDSEYLRYFQSPKEVYSKRMISLRCVDKVVGVGDLKFQLHSQ
KRTFLFRADNTEEKNDWVCCLEKALSDNKNSIESRNLFFKRRSVDFSFEGSLELMSPRIK
VYTIMSRDKLYLFKDCEEQFQGVGITDIDMRLALVKDGEKRSFTLTTPYRTFSFLAESES
ERQRWCDSLNECVSRSLSYDGVCESLWRVASNQQCADCSASMPEWASINLCVLLCEKCAG
VHRSLGQNVSKVRSLKLDERVWTDDLIRVFLQLGNAKANTFWGANIPPSESLCVNANDEH
RLQHITAKYVQGKYRKYHTLYGHQEELDSALCKAVQSADLLEILTLLHCGADIKCHTGIP
EFPTPLSLAKRSGQSAQAELLTQNLNTAESFESVLKDVSIQSHCGYLFKPSSSSRPITEH
KNKADFAQRWCCLEGGVFSYYKNDHSNKRGSMKTSEIICLSVNSPGKHVYEHTFELYTDE
GRGYLFGADDANTVRNWSKAISMAMLPPALFNVCGPCDRLGRLRCVEGSHGIGWFCLSGF
ILHVLLENTVQTIDLRKLLSLTLSDSDGSMVLVWRGGTLHVPTDRRPHFVGWQTCIQQKS
GSGDQPLSHQQLTELDVPVTVDRCLNHVTRHGLLSPGIYRKNGVNSHITELLKRFHNDAR
SVSWSELDFSVDDVANTLKRFLREVKDGVLNGQDNAKSWLNAAGLEDKSERIYQYQNLLS
NLPIVNQATLKVLTHHLHSVQHLSNENQMTKKNLSIVFGPTLFQNDGKDVKATRVVEELI
QNYCSIFNVSESELQRQLNLTTVALNKHKSERPSSKTTSSIICAVYLERIEEGLEVLVQV
GANMTAVELVSEVLDHKEVKPTNEDFWSCYEILENVEMDRMLHYSEKVLTVYFSPVLKCN
LLVKKNQYISSILKYLGMMENVGKSGTLRVCEVKTERSKNYCSRYCELSGTTFRLHKGLQ
NSPCEREWPVKELKVYNGYRSKLNSPTPWGITLVHEKRPWYLCCDNEDEFIEWTATFYSI
QYDGDIWPSLLVMQSHNS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaagcaacaggatctattgcgagacatgcagaagtgctttgaccaaatgaaa
gttgaagagaataaaacagaaacagtctctgacagacatcgcaatgagagtattaatatt
ggatgtacagagtttcctgataactcagaagaggtccgttcgattcttaaagctgggtgg
ctagaaaaaacgcctccaaatagtggggtgattttccagcgccgatgggtgcagctggat
tcagaatatttgagatattttcagtctcccaaggaggtatactctaaaaggatgatatct
ctgcgatgcgttgataaggtggtcggtgttggagatctgaaatttcagctccacagtcag
aagcgaactttcctgttccgagcggacaacactgaggaaaaaaatgattgggtgtgttgt
cttgaaaaggctctgagtgataacaaaaacagtattgaatcaaggaatctgttctttaag
cggagaagtgtggattttagtttcgaaggctccctggagttgatgtcaccacgcatcaaa
gtctacacgattatgagcagggacaaactgtaccttttcaaggactgtgaggaacaattt
cagggtgttggtatcactgatatagacatgcgattggccctagtgaaagatggagaaaaa
cgctctttcacactcaccactccgtatagaacattcagttttttagcagagtcagagagt
gagaggcagagatggtgtgactctctgaatgagtgtgtgagtcgatctctgtcatatgat
ggagtgtgtgaaagcttgtggcgtgttgcatccaaccaacaatgtgcggactgcagtgct
tccatgccggagtgggcttcaataaacctgtgtgtgctgctgtgtgaaaaatgtgcaggt
gtgcacagaagtctgggacagaacgtgtcaaaagttcgcagtctgaagctggatgagcga
gtgtggaccgatgacctcatcagggtttttctgcagctgggtaatgctaaagcaaataca
ttctggggagcgaatattcccccgagcgagagtctttgcgtgaacgcaaatgatgagcat
cgtctccagcacatcacagccaaatatgtgcagggcaaatatcgcaaatatcacacactc
tacgggcatcaggaggagcttgatagtgctctgtgcaaagcagtgcagtcggcagattta
ttggagattctaacattgctccactgtggggcagatatcaagtgccacactggtatccca
gaattcccgactccactgtctctggccaaacgcagtggtcagtcagcacaagcggagcta
cttacgcagaacctaaacacagcagaatcttttgagtcagtgcttaaagatgtatccatc
cagtctcattgtggctaccttttcaagccctcctcatcatctcggccaatcacagagcac
aaaaacaaagcagactttgctcagcgttggtgttgtctggagggtggagtgtttagctac
tataagaatgaccatagcaacaagcgtggtagcatgaagaccagtgaaattatctgcctg
tctgtcaacagcccagggaaacatgtctatgagcacacctttgagctgtacactgatgaa
ggccgaggctacctgtttggggctgatgatgctaacacagtcagaaactggagcaaggcc
atttccatggctatgttacctcctgccctctttaatgtatgtggaccctgcgatcgtctg
ggtcgcctacgctgcgttgaaggaagccatgggattggttggttttgcttgagcggcttt
atactgcatgtgctactggagaacactgtacaaacaattgatctgcgcaaactgctctcg
ctcacgctctccgatagcgatggctccatggtgctggtgtggaggggtggaaccctgcat
gtcccaactgaccgcagacctcattttgtgggctggcagacctgcatacagcagaaatct
ggctctggagatcaacccctttctcaccagcagcttacagagcttgatgtaccggtgacc
gtcgaccgctgcttgaaccatgtaacacgtcatggacttctgtctccgggaatctaccgg
aagaacggcgtaaattctcacattactgaactactgaaaaggtttcacaatgatgcacga
agtgtctcatggagcgagttagatttttctgtggatgatgtagcaaacactctaaagagg
tttctcagggaggtcaaagatggagtgctgaatggccaggataatgccaagagctggctt
aatgctgcaggtctggaggacaaaagtgaaaggatttatcaataccaaaatctcctatca
aacctaccaattgtcaaccaagcaacactcaaggtcctcacacaccacctgcatagtgtt
cagcatctgtccaacgagaatcagatgacaaaaaaaaaccttagtattgtgtttggtcca
acgctcttccagaacgatggaaaagatgtcaaagcaactcgagtggtggaggagttgatc
cagaactactgcagtatttttaatgtttcagagtctgaactacagaggcaactcaacttg
actactgtcgccctgaataaacacaaatctgagaggccctcgagtaaaaccacatccagc
attatttgtgctgtttatcttgagagaatagaggaggggttagaggtgctcgttcaggtt
ggggcaaatatgactgcagttgagttggtttctgaagttttggatcataaagaagttaag
ccgaccaatgaggatttctggagctgttatgagattctagagaacgtggaaatggaccga
atgctgcactactcagaaaaagtgttgacagtctacttttcacctgtgctaaagtgtaac
ctgctagtcaaaaagaatcaatacatcagcagcatcttgaagtacctggggatgatggag
aatgttggtaagagtggcacactgcgtgtttgtgaggttaaaactgaacgcagcaaaaac
tattgtagtcgctactgtgaactgtctggtaccacctttagactgcacaaggggctgcag
aattctccatgtgagagggagtggcctgtcaaagagctgaaagtctacaatggttatcga
agcaaactgaattcacccacaccttggggaataacactggtacatgaaaaacgaccatgg
tatctctgctgtgataatgaggatgaattcattgaatggacagccactttctatagcatt
cagtatgatggtgacatctggccctctctgttggtgatgcaatctcacaacagctga
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