Triplophysa dalaica: 130420300
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Entry
130420300 CDS
T09616
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130420300 (rint1)
Membrane trafficking [BR:
tdw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
130420300 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Rab5-bind
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
130420300
NCBI-ProteinID:
XP_056603453
LinkDB
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Position
5:complement(8477182..8481898)
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AA seq
777 aa
AA seq
DB search
MAAPVMEPNNHNSNDLSHLKRTDSVKSPSGDGNFTDNVVELVQQEIGSDLKSLKNVAGLL
EKLTLENKQLEEQVQTVSSSVPLRVSAALSAAEESRVKLDSLLQKERLLSNTLQQHLQGS
QLWTDNIGQVLGQLDTLERHMKYLQCLARIEELSDSIQQHLMTNSVWEAVGAIDSMASLD
MGLRESGCTHLQSFLRETLRFWHKILKDKLTSDFEEVLTQFHWPFISSPTQSLSPPANAQ
ELNSQLELLVSQLLSLQTSDDLISEKDAPSRPGLSQNPPLSLPIQIMLLPLSKRFRYHFT
GNRQTNNLCKPEWYLTQVLMWIGNSSNFMEEKIQPILDRAGGKVNASVELCRGLLTLVHE
KLAHDAPRLLYDDAMFCHLVDEVLQFEKELRTTHSYPHSYPGVLQILLEESVFQKWLSVE
RKMALEKVDAMLSAEGAWSSQYKDITDMDELKAPDCAETFMTLLLVITERYRSLPCPRAQ
LSFLALQKELVDDFRIRLTQVMKEESRQPLSPRYCAILNATNYISTVLSDWGDNVFFLQL
QHAAVSVGEEILGPLGATETGRLASLEGSLFEALLALLERLRGDMQGRLRDAVMRDVKEK
AQPYCKDRWISLPSQCDQATMSLSSSACPMMLCLRDHLLQLQQLLCLPLFQMLWQGLAER
LDHFIYENLILYNHFNEGGATQLQFDMNRNLFPLFGHYCKRPENFFKHIKEACNILTLKV
GPALLLLEVLKQAEDEDGALNPVQPSPESALNEMGIYKLAPSDVQILLKLRSNLLHQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcctgtgatggagcccaacaaccacaacagcaacgatctatcacatcttaaa
cgcaccgacagcgtcaaatctccatctggggacggaaactttacagataacgtggttgaa
cttgtacaacaagagatcggcagcgatcttaagtcgctgaaaaatgtcgcggggcttttg
gagaagttgacattagagaacaagcagttggaagagcaggttcagactgtatcatcttcg
gttcctttgcgcgtgtccgctgccctgtccgccgcagaggagtctcgtgtcaaactggat
tctttactgcagaaggagagacttctttccaacactttacagcagcatctgcagggctca
cagctgtggacagacaacattggacaggtcctgggtcagcttgatacattagagaggcac
atgaagtacctgcaatgcctagctcggattgaggagctcagtgacagtattcagcagcat
ctgatgaccaacagcgtgtgggaagcagttggagccatagacagcatggcctctctggac
atgggtttacgggagtcaggatgtacccaccttcagtcttttctccgagaaacgcttcgc
ttctggcacaagattcttaaagacaaactaaccagtgattttgaggaagtcctgacgcag
ttccattggccgttcatttcgtcccccacacagtctctctctccccctgcaaatgctcag
gagctcaacagccagctggagctgctggtttctcaacttttatctctgcagacctcggat
gaccttatatcagagaaggatgcaccgtctcgtcctggactttcccagaatcctcctctc
tcactgcccattcagatcatgctgcttcccctcagcaaaaggttccgataccacttcacg
ggaaaccggcagaccaacaacttatgcaagccagagtggtatttgactcaggtgcttatg
tggattggtaacagctccaactttatggaagaaaagattcagcctatattggatcgagct
ggaggcaaggttaatgccagtgtggagctgtgtagagggctcctcactttagtgcatgag
aagctcgcccacgatgctcctcggttgctctacgacgatgctatgttctgccatctcgtc
gacgaggtgctgcagtttgaaaaagagcttcgcaccacccacagttacccacactcttac
cctggcgtcttgcaaatacttctggaggagagtgtgttccagaaatggcttagcgtggag
agaaaaatggctttggaaaaagtggacgccatgctgtcggcagagggggcctggagttct
cagtataaagacattacggatatggatgaacttaaagcgccagattgtgcagagaccttt
atgacccttctcctagtcatcacagagcggtaccgttctctgccgtgtccacgggcccag
ctcagttttctggctctgcagaaggagctggtggatgattttcgaattcgcctaactcaa
gtgatgaaagaagagtctcgacagccgctgagcccgcgttactgtgccatcctcaacgct
accaactacatctccactgttctcagtgactggggagataatgtttttttcttacagttg
cagcatgcagcagtgtctgtgggcgaggagatcttgggacctctgggggccactgagacg
gggcgactggcctctctggagggttcattgttcgaggccttattggccctgctggagagg
ttacgaggggacatgcagggtcgattacgggacgcggttatgagagacgttaaggagaaa
gcacagccatactgtaaagacagatggatctccctgccgtcacagtgcgaccaggccact
atgtctttatccagctccgcgtgtcccatgatgctttgcttgcgggatcacctgctccag
ttgcaacagctgttatgtcttcctctttttcagatgctctggcagggtctcgccgagagg
ctcgaccactttatttacgaaaacttgatactctataaccatttcaacgaaggcggggct
acacaacttcaattcgacatgaacagaaacctcttccctctgtttggtcattactgcaag
agacctgaaaacttcttcaaacacataaaggaggcatgtaacatcctgactcttaaggtc
ggcccagcactcttgttgcttgaagtattaaagcaagcagaggatgaagatggagccctg
aaccctgttcagcccagtccagagtcggcactaaatgagatgggcatctataagctggca
cccagtgatgtgcagatccttttaaagctgcgctctaacttgctccaccaatga
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