Triplophysa dalaica: 130420388
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Entry
130420388 CDS
T09616
Symbol
lamb1b
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130420388 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130420388 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
130420388
NCBI-ProteinID:
XP_056603620
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All DBs
Position
5:12534904..12557237
Genome browser
AA seq
1773 aa
AA seq
DB search
MWIFRIAALTTFIGLHALAQFPTHNDKCTEGSCYPATGDLLTGRAHRLTASSTCGLNEPE
TFCIVGHLQDDKKCFECDSLQTYNKFTNPNSHTIENVVTGFSPNRLETWWQSQNGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGGSWQVYRYYAYDCADSFPNVPQGPV
RKVDDVICDSRYSDIEPSTEGEVIFRALDPAFVIPDPYSPDIQNLLKISNLRIRMTKLHN
LGDNLSDDRDKVQEKYYYAIYDMVVRGNCFCYGHASDCAPVDNEAGVEGMVHGHCVCKHH
TSGLNCEKCEDFYQDLPWKPAVGRNTNACKKCECNHHSYSCHFDTAVYHSSGNISGGVCD
DCQHNTEGQWCQICKPFYFQHPDRDIRDPNICKPCDCDPWGSLNGGICDSATDAVEDRIA
GQCYCKPNVEGERCDHCRKGHYGLSDDPLGCLPCSCNPLGTLSAGGPCDTETGSCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDVGGALNNNCFPETGQCVCKEHMFGRRCDQVH
SGFYFAGLDHYTFEAEDASFGPGVRLVQRPLPVDRKPTWTGPGFVKVPEGETLSFNIYNL
PQSTEYNFMIRYEPQLPDEWEKVEMTVERPDAGYQSALCTSTYNDGQSISLHPGSRYAVL
SSPVCLEKGQNYTVKFYFPQYSSYSHHSSPHTLIDSIVLLPVVEDLDLFSGGVQQKENWE
MFKKYRCMERSQSVVKIPMTDICRDYIYSISALLHNKALECKCDPRGSLSSVCDPSSGRC
QCRPNVSGRNCDTCAPATFLFGSSGCRPCECDPLGSQNPFCHHTTGQCLCVPGAYGRQCA
NCKPEYWGFPHCQPCFCNGHSEQCQPRTGECLDCRGYTTGIHCERCAIGYHGSALLGSSE
PCRPCMCPDGPGSGRQFAESCYQNHNSLENMICVCSSGYKGSRCDECAPGYYGNPQVPGG
RCSPCPCNSNINMEDPESCDARTGVCLKCLFHADGDACQYCSHGYYGDAHTQNCRRCTCN
PMGTSRRSCADGLCDCDRVSGQCQCLPGIEGPQCDRCAPDTWNINSGKGCQPCQCHPEHS
YSTSCDLLSGRCSCKPGFGGRTCNECRDLFWGDPEVKCYVCDCDPRGIATQQCDKMSGEC
VCIEGVSGRMCDSCDRGYVGTFPQCEPCHKCFHDWDTNVGELTNQTQRLMDTIEELKDTG
VTSPYKDTISSLDDGIKQLREILDDEKIHQTLEHTQSLRQQVNEMAPLLRGSIDTSVSDL
EQISADQQKAMKNLNSLTEEAQNLQETSKDKEQQVLNMKHSDTRGAMDSIREYNEESSEA
NSIASKAASDPDSIVKQSAQLRGAANARLDTSEKEFNLKHQLHVQRMDKITSDLDSTDLS
KLSQQVCGGAPGPEGCGDCGGLGCVTEEGVSQCGGEECNTLVTQSQEALKSVKNNDQEFL
KNLREVDKLNKKVSDARGRADEAKISSQNVSLRANQSKARVEKTNDDLRDLIQQIRDFLT
KTTDLKRIEEVADEVMKLSLPVSSGALKDLTTEIRDHVASLTQVDDILTQTAEHVRTAET
LLKQAQAANETTTTLKQAADKIKDALDDTARAQLAANKAMKDVETDMNVTRHQINSVQSI
TETTEFKLSTSTQRFLDLERGVGELRKKSQETSSHAEQIQKQAEDNNADVERTEQNFDSN
VQPKYALLSGLIEQKGAVVYDARQRSEKLRQEAQDLLIDATNKLQRLRELERSFEGNQKT
FVMKAEELDILESEARNVLQELNQKVAIFSTCA
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattcaggattgcagctcttaccacatttattggtttgcacgccctggcacaa
tttcccactcacaatgataaatgtactgaggggagctgttaccccgctacgggtgatctg
ctgaccgggagagcacatcgacttacagcctcctccacctgtggattgaatgagccagag
acattctgcatcgtgggccatttgcaggacgataagaaatgtttcgaatgcgactctcta
cagacgtacaacaagttcaccaatcccaacagccacactattgagaatgtggtgacaggg
ttttctcctaaccgtcttgaaacctggtggcagtcccagaacggagttgaaaatgtgacc
attcagctggatttggaggccgaattccacttcacacacctcatcatgacctttaagacc
tttcggcctgccgctatggtgattgagcgttctgcagattttggcgggagctggcaggta
taccggtactatgcatacgactgcgcggactcctttccaaacgtccctcaggggccagtc
agaaaagtggatgatgtcatttgtgacagccgttactctgacattgagccatcgacagaa
ggagaggttattttcagggcacttgatcctgcatttgtgattcctgacccttacagccca
gatatccagaatctattaaagatctcaaacctgcgcatacggatgacaaagttacacaat
cttggtgataatctgtcagatgatcgagacaaggtgcaagagaaatattattacgctatc
tacgacatggtcgtccgtggtaactgtttctgttacggtcatgcctctgattgtgcgcca
gtcgacaatgaggcaggagtcgagggtatggtccatggtcattgtgtgtgtaaacaccac
acttctggactgaactgtgagaagtgtgaggacttttatcaagatctgccatggaaacca
gcagtgggccggaacacaaacgcatgcaagaaatgtgagtgtaaccatcactcgtattcc
tgtcactttgacacggcagtgtatcactcttctggtaacataagtggaggtgtgtgtgat
gattgtcaacacaacacagaaggccaatggtgtcagatctgcaaaccattctatttccag
caccctgacagagacatcagagaccccaacatctgtaaaccctgtgactgtgacccctgg
ggctctctaaacggaggcatatgtgacagcgctacagatgcagtggaagataggattgct
ggacagtgttactgcaaacctaatgttgaaggagaacgctgtgaccactgtagaaaggga
cattacggcctcagtgatgacccactgggatgtctgccgtgcagctgtaatcctctgggc
acactctcagcaggaggtccctgtgatacagagacaggaagctgttattgcaaacgtctt
gtcaccggacgaaactgtgaccagtgtttgcctcagcactggggtctcagtaatgatatg
gatggctgcagaccatgtgactgtgacgtgggcggggctttgaataataattgttttcca
gagacaggacaatgcgtatgtaaggaacacatgtttggcaggcgttgtgaccaggtgcac
tcggggttctatttcgcaggactggaccattatactttcgaggctgaggatgcatctttc
ggaccgggcgtgagattggttcaaaggcctttacctgtggatcgtaagcccacctggaca
ggtccaggatttgtaaaagtaccagagggcgaaacgctgagcttcaacatttacaatttg
ccacagtctacggaatacaatttcatgatccgctatgaaccacaattgcctgatgaatgg
gagaaagtagagatgactgtggagcggcccgacgctggctaccaatcagctctctgcact
tctacttacaatgatgggcaaagcatttcactgcatcctggatccagatatgcggttctt
tctagtccagtgtgtttggagaagggtcagaactacactgtgaaattttactttccacag
tactcatcatacagtcatcactcctctcctcacacacttattgattcaatagtgctgctg
ccagtggtggaagatctggatctgttttctggaggagtccagcagaaagagaactgggag
atgtttaagaagtaccgatgcatggaacgcagccagagtgttgttaaaatccccatgacg
gatatttgtagagactacatctacagcatatctgcgctattgcacaataaagctctggaa
tgtaaatgtgacccccgtggttctctgagctctgtttgcgaccccagcagtggccggtgc
cagtgtcgacccaatgtttcgggcaggaactgtgacacctgtgctcctgcaaccttcttg
tttggatcttcaggatgcagaccgtgtgaatgtgacccactgggttctcagaacccattc
tgccaccataccactgggcagtgtttgtgtgtgccaggggcatatgggcgccagtgtgcc
aactgtaaacccgaatactggggtttccctcactgccaaccctgcttctgtaatgggcac
agcgagcagtgccaaccgcgtacaggggaatgtctcgactgtaggggctacaccactggc
attcattgtgagagatgtgcgattggttaccacggcagtgctttgcttggctcatcggag
ccatgtcgaccctgtatgtgccctgatggaccaggcagtggaaggcaattcgctgagagc
tgttaccaaaatcacaactctctagaaaatatgatctgtgtatgtagctcaggctacaaa
gggtctaggtgtgacgaatgtgctcctggttactatggtaaccctcaggtgccaggaggc
cggtgcagtccatgtccatgtaacagtaatattaacatggaggacccagaatcttgtgat
gcccgcactggtgtctgtctcaaatgcctgtttcatgctgacggtgatgcatgccagtat
tgtagtcatggttactatggagacgcccatacacaaaactgcagaaggtgtacgtgcaac
cccatgggtacttcgagacgcagctgtgccgacggtctgtgcgattgtgacagagtcagc
ggtcagtgccagtgcctacctggcatagagggtccgcagtgtgaccgctgtgcaccagac
acatggaacatcaacagtggaaaaggatgccaaccctgccagtgccaccctgaacactcc
tatagtacttcctgtgacctgctgtctggtcgctgttcgtgtaagcccggttttggaggc
aggacttgtaatgagtgtagagacctattttggggcgatcctgaggtcaaatgctacgta
tgtgactgtgacccacgaggtattgccactcaacagtgtgataagatgtctggagaatgc
gtgtgcatagagggtgtgtccgggcgtatgtgtgactcctgtgatcgtggttacgtgggg
accttccctcagtgtgagccctgtcacaagtgctttcacgactgggacactaacgtggga
gagctgaccaaccaaacacagaggctgatggacactatagaggagctgaaagacacaggc
gtgacgtcgccttataaagatacaatatcaagtctggatgatgggatcaaacagctcaga
gaaatactggacgatgaaaagattcatcaaactctggaacacacgcagagtctacgtcag
caagttaatgagatggcaccacttttgcgaggatccattgacacatcggtatccgatctg
gagcagatatctgccgatcaacagaaggccatgaagaatctgaacagtctcactgaggag
gcccagaacctacaggagacctccaaagacaaagagcagcaggttctgaacatgaaacat
tcagacaccagaggtgcgatggacagcatcagagaatataatgaggaatcttcagaggcg
aattctattgctagtaaagctgcatccgatccagacagtatagtgaaacagtctgctcag
ctacggggtgccgcaaacgcaagactggacacatcagagaaagagtttaacctgaaacat
cagctgcatgtacagaggatggacaaaataacatctgatctggactccacagatctttca
aaactaagccagcaggtgtgcggaggtgcaccaggtccagagggttgcggtgactgtggt
ggtctggggtgtgttaccgaggaaggtgtgtcccagtgcgggggtgaagaatgtaacaca
ttagtgacccaatcccaagaggccttgaaaagtgtaaaaaacaatgaccaagagttcctt
aaaaatttaagagaagtggacaagctaaacaagaaggtgtcagatgctcgaggtcgtgca
gatgaggcaaaaatcagctctcagaatgtgtcactcagagccaatcagagtaaagcacga
gtggaaaagactaatgatgacctcagagacctcattcagcaaattcgagacttccttaca
aagacaacagatctgaagcgtatagaggaagtagctgatgaggtgatgaaactgagtttg
ccagtgtcatccggagcactgaaagatctgaccacagagatccgtgaccatgtggccagt
ctgacccaggtggatgatatcctgacccagactgcagaacatgtccgcactgctgagact
ctcctgaaacaagcacaggctgccaatgaaacgaccacaactctgaaacaggccgctgat
aaaataaaggatgctttagatgatactgcacgagcacagttagctgccaataaagcaatg
aaggacgttgagaccgatatgaacgtcacaagacatcaaatcaattctgtacaatctata
actgaaacgaccgagttcaaattgagcaccagcacacaaagattcttggatcttgaaaga
ggagtgggtgaactccgaaagaaatctcaagagacgtccagccacgcagagcagatccag
aaacaggctgaagacaacaacgcagacgttgagagaactgaacagaactttgactcaaat
gtgcaacctaaatatgcactgctgagtggtctcatcgagcaaaaaggtgccgttgtgtat
gatgcacgtcagaggtctgagaaactcagacaggaggcacaagatttactaatagatgcc
accaacaaactacagagactaagagagctggagagatcattcgaaggaaaccagaaaacc
tttgtgatgaaagcagaggaactcgacatactcgagagtgaagccagaaatgttcttcag
gagctcaatcagaaggttgccatctttagcacatgtgcttaa
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