Triplophysa dalaica: 130420521
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Entry
130420521 CDS
T09616
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130420521 (mkrn1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130420521 (mkrn1)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130420521 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-CCCH_3
zf-ANAPC11
zf-C3HC4_4
ATP-grasp_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130420521
NCBI-ProteinID:
XP_056603812
LinkDB
All DBs
Position
5:5413697..5421442
Genome browser
AA seq
439 aa
AA seq
DB search
MAEAAAASTAAPAVIGGWTKHVTCRYFMHGLCKEGENCRYLHDLNSCKPTMICKFFQKGC
CAFGDRCRYEHTKPTKQDEAPSSKPSVPLSAAPLVGTPDPASDGPGGTTSAQEKPHSSGA
VDWVNAAEFVPGQPYCGRAEPVLCEGSGPLIEEEYEKEIANKEMKKQLCPYAAIGECRYG
LNCAYLHGDVCDMCGLQVLHPTDTSQRSQHIKACIEAHEKDMEISFAIQRSKDMMCGVCM
EVVFEKTNPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSE
YWVEDKEEKKKLIQKYKDGMGTKSCRYFDEGRGTCPFGANCFYKHAFPDGRIEEPQPQRR
QTGSNGRNRSSRRTPLWDLLDERENSDSFDNEDEEMVTFELSEMLLMLLAAGTDDDVTDS
EDEWDLFHEELDNYYELYL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcagcgtcaacagcggctccagcagttatcggaggctggaccaag
cacgtaacctgcagatatttcatgcacggcctttgcaaagagggtgaaaactgtcgatat
ttacacgacctcaacagctgcaagccgaccatgatctgcaagttcttccaaaaaggatgc
tgtgctttcggggaccgttgtaggtatgaacataccaaacctaccaagcaagacgaagcc
cctagttctaagccgtctgtgccgctgtccgctgctccccttgttggcactcctgatcca
gcgtctgatggaccaggtggcacgaccagcgcccaggagaagccccacagctcgggggca
gtggactgggtcaatgccgcagagttcgtgccagggcagccctactgcgggagggctgag
ccagtgctgtgtgagggttctggcccgctcatcgaagaagagtatgagaaagagatagct
aacaaagaaatgaagaaacaactttgcccgtatgctgccatcggcgagtgtcgctatggt
cttaactgtgcgtatctccacggtgacgtttgtgacatgtgcggcctacaggtgctccat
ccaactgacacctctcagcgctcgcaacacatcaaggcctgcatcgaggctcacgagaag
gacatggagatctcgtttgccatccagcgcagcaaggacatgatgtgtggcgtgtgcatg
gaggtggtgttcgagaaaaccaacccgagcgaacgccgcttcggcatcctctccaactgc
agccactgttactgcctcaagtgcatcagaaaatggagaagcgccaagcagttcgagagc
aagatcataaagtcctgcccagagtgtcgaatcacatccaactttgtcataccaagcgaa
tactgggtagaggacaaagaggagaagaagaaacttattcagaagtacaaggatggcatg
gggactaaatcatgccggtattttgatgaaggccgtgggacctgtccctttggagccaac
tgcttttacaagcacgccttccctgacggccgtattgaggagcctcagccccagaggaga
cagaccggctctaacggaagaaaccggagctccagacgtacgccgctttgggatcttctc
gacgagcgggagaacagcgactccttcgacaacgaggacgaggagatggtgacgtttgag
ctgagcgagatgctcctcatgctcctggcggccggcacagacgacgacgtcaccgattcg
gaagatgaatgggatttgttccacgaagagctggacaattactacgagctttacctttag
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