Triplophysa dalaica: 130420623
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Entry
130420623 CDS
T09616
Symbol
ppfibp1a
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130420623 (ppfibp1a)
Membrane trafficking [BR:
tdw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130420623 (ppfibp1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
COMM_domain
Focal_AT
Motif
Other DBs
NCBI-GeneID:
130420623
NCBI-ProteinID:
XP_056604028
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All DBs
Position
5:5164327..5180249
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AA seq
903 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAMGYTNGLFDCQSPTSPFLGSLRVLHLLEDMRAALD
LMDPEEKESLRMQVSETTAEGLMEWLQGRLTNGHGTAAGDSVYQERLTRLESDKECLVLQ
VSVLTDQVDVQAEKIRDLDTNLEEHRMKLNATEELLQQELLTRSALETEKLELLTEISSL
KLKLAAAEGDRRESAGLYQEVTDMRLVLTNMECDRQEYERNLHCTKEELKALQKQLEERD
QALSKLQGETHLETTTAQKSQGAEKDTEIQRMRNTVDSLNASNDEKDLKIKALHTQLMRY
KSVQDTVTSVQVSKDKSREEDTRGWLHEGITKDPETEVAEDTDEPQLIPCTELLPEADIS
TVTAPKPATESTLGPHAQRATESVSQIQQTERPCAASSNEDGASKNGGSPCVSPTQSSSE
GNDSFGSKRTRSSFGRGFFKMRGHKMTSSAPNLDEGQRKGAEHLDLAGVSPQKTQALDTH
SPEGKKKSKGIMKFFGRRKRSQSSSDDLDESPNAEFKRGGVRATAGPRLGWSHDLQRRNN
NELDSQFSRWNKEQVCEWLHEQGLGLYIHQAQQWIRSGETLLKASQHDLEKELGIRHPLH
RKKLLLALQALGLEDEDALGKLDYNWVTRWLDDIGLPQYKSHFDEGRVDGRMLHYMTVDD
LLGLKVGSVLHHLSIKSAIQVLRINHYDPDCLRRRPTEINPTPAEICQWTNHRVMEWLRS
VDLAEYAPNLRGSGVHGGLMVLESRFNVETIALLLNIPQNKTLLRRHLATHFHLLIGSDS
QRQKQQYLENPDYMLLTATAKVKPRRLSFGGFGTLRRKRQEDAEDYICPMNVERPMSTSF
HKDIHKSEDGFDQLEPIEESEGTVRQIGAFSEGINSLTSMLKEDEFLRGYSSRFSETNAK
DDD
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgaaatgttggcagctgcgctggagcagatggatggcataatt
gcaggttctaaggccatgggctacaccaacggcctgtttgattgtcagtcgcccacttcg
cccttcctgggcagccttcgggtgctgcaccttttggaggacatgcgagctgcgctggac
ctgatggatccagaggaaaaagagagcctgcggatgcaagtgtctgaaaccacagctgag
ggtctgatggagtggctgcaaggccgacttactaatggccatgggaccgcagctggggat
tctgtctatcaggagcgtctcacccgcttggaaagcgacaaagaatgtctagtactgcag
gtgagtgttctgactgatcaagtggacgttcaggcagaaaaaataagagacctggacacg
aacctcgaggagcaccgtatgaagcttaatgccactgaagaattactacagcaggagctg
cttaccaggagtgctttagagactgaaaaactggaattgctgacagagatatcgagtctg
aaactaaagctggctgctgcagaaggagatcgtagagaaagcgcgggtctttatcaggag
gtcaccgacatgcgccttgtgttgactaacatggaatgtgatagacaagagtatgagaga
aatcttcactgtaccaaagaggagctaaaggcattacagaagcagctggaggagagagat
caggctcttagcaaactgcagggcgaaacccacctggagaccaccaccgcacaaaagtca
caaggtgcagagaaagacacagaaatccagcgaatgaggaatactgttgattctttaaac
gcatctaatgatgaaaaggatcttaaaataaaagcgctgcacacgcagctgatgcgttac
aagagtgttcaggatacggtgacgtcagtgcaggtatcaaaggacaaaagcagagaagag
gacacacgagggtggctgcatgaagggataactaaagatcctgagacggaggttgcagag
gatacggatgaacctcagctcattccatgtacagaactccttcctgaagctgacatctcc
acggtgaccgcacccaaacctgcaactgagagcacgctaggaccccatgcacaaagagct
acagaaagtgtctctcaaattcagcagacagagaggccttgtgcagcgagcagtaacgag
gatggagccagtaaaaatgggggctcgccatgcgtctcccccactcaatccagctcggag
ggcaatgacagttttggctccaaaagaactcgttcctctttcggacgtggtttctttaag
atgagaggccacaagatgacaagcagcgcaccaaacttggatgaaggacagcggaaggga
gcagagcacttggacttggctggagtatcccctcagaagacacaagcattggatacgcat
tcgcctgaagggaagaagaaatccaaagggatcatgaagttttttggaaggaggaagaga
agtcagtcaagctcggacgatctagatgaatctcctaatgcagagtttaagagaggtgga
gtccgagctacagcgggtcccagactgggctggtcacatgatctgcagcgacgcaataat
aatgagctggacagccaattttcacgctggaataaagagcaagtgtgcgagtggttacat
gaacaggggcttgggttgtatatacaccaagcacagcaatggatccgctcaggagaaact
ttattgaaagcatctcagcatgacttggaaaaggaattgggcatcaggcaccctttacac
agaaagaaactgctgctggcccttcaggcgctggggttagaagatgaagatgcattggga
aaactggattacaactgggttactcgatggctggatgacattggtctgcctcagtataag
tctcacttcgatgagggccgggtggatggacgcatgcttcactacatgactgtggatgat
ctgcttggtctaaaagtaggcagtgtgctccaccacctcagtattaagagcgccatccag
gttctacgcatcaaccactacgaccccgactgtctccgccgcagaccgaccgagattaac
cccacaccggctgaaatatgtcagtggaccaatcacagggtgatggagtggcttcgctcg
gtcgatctggccgaatacgcacccaacttgagaggaagcggagtccacggaggactaatg
gttttggagtctcgcttcaatgttgaaacaattgctttgcttctcaacattccgcaaaat
aaaacactgttgagacgtcacctcgcgacccacttccatcttttgatcggttcagattct
cagagacaaaagcagcaatatctagagaatccagattacatgctcctcacggcaacagcc
aaagtgaagccaagacgtttgtcatttggaggttttgggacattgaggcgaaaacgtcag
gaggatgcagaagactatatttgtcccatgaatgttgagaggcccatgagtaccagcttt
cacaaagacattcacaaatctgaagacggctttgatcaactagagccgattgaggaatct
gaggggactgtgcgacagataggtgctttctcagaaggaatcaatagcctgacaagcatg
ctgaaagaggatgaatttttgaggggctattcctcccgtttttcagagacaaatgccaaa
gatgacgattga
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