Triplophysa dalaica: 130420638
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Entry
130420638 CDS
T09616
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130420638 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130420638 (arid2)
03021 Transcription machinery [BR:
tdw03021
]
130420638 (arid2)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130420638 (arid2)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Helix-turn-helix
ARID
130420638 (arid2)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130420638 (arid2)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
130420638 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
130420638
NCBI-ProteinID:
XP_056604062
LinkDB
All DBs
Position
5:3704683..3718088
Genome browser
AA seq
1657 aa
AA seq
DB search
MANSTGKNLPEQRRKGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLSALYMRVVSLGGF
AKVSDKNQWAELGEDFHFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEEDDEEQPGNPKP
LLPIGAIPTSYNYQQHTVSDYLRQSYGLSAEFVPPSDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKDPKLITLLLAHAGVFDDSLGSFSAVFGTDWREKTSRDFVKFWKEV
IEDNEVKDLISDKSCTPQNGSETRHFCTPLFHPPRNVGIGDMEGQRVLQVAMILRNLSFE
ETNIKLLAANRTCLRFLLLCAHCTFIQLRQLGLDTLGNVTGELQLDPVDFRTTHTMFHTI
TKCLLSRDRFLKMRAMEILGNLSKAEDNSVLICEYVDQESYREVISLLTLPDIMLVISAL
EVLYQLTELGEVTSSKIATVDRSIDLLVRLVSVDLQTFGPDALTAVKLIEHQASSCQVSE
VRPQLVENVPSPTQGTPGSVNRVALQPTPPPGIVEADGEKFAAQWLNAHFEVHSESSVSR
SEMYSEYLASCSKMARGAVLTSNNFYKCLRTLFPNHTVKRVEDSRLSGQAQIHVVGLRKR
SIPLPVQLYYHHQQQQHQASPTVVPKPEVLSDSPQPQSVLIRAPAPSLTAGQAAPQVALT
MHGTPSAPAPPPTVPRLLINPPGEAALPACPPATAPVPPRPNDILTTAMIQSSIPTSSAA
PTVPNHNTVTTASPSQQPLLHHAPVTLIQQGPPQGHIFAGQLQGVCPSVGQQHLPAPQVQ
QGAPSQEAMVLAPTQYVSAPCTSFLAGGQVVTVAGVQSTHGPRVGFQNIAPKPAPQAQSL
QPQQQQQQLQQQQSLVIVSPNPQPTTAFAPAIHQIVLTNPSVMPSAPTIQLPVQPMAQPA
VPNSPVPNPTQVQQGQPHTVSQMLSVKRHQQQFHLQQPPQPPPPAQPTSTESSLIKQLLL
PKRGPSTPGGKLILPAPQVPAPASSTAPSPQVVYQVSNSGQGTPQPQLNVQLMQSPLQAT
GAVPISILPGQIISNSTPGTLLQAAPSNQVTFTVVPNSGFPAAAAVSQGAPTSIVTQTSL
SVSTAPPTIGLPLTPPLPVAGAACPTPPFRGDKIICQKEEEAKDDTGLHIHERRIEVMEN
SVADCSAKTSNGDSAEVDGPAGKLLNGRKFDSSLPPYHSGNSQAEQGMQALNGPATQGGE
GPGKQMLVDPKKLMLNGVCDLERSDPTTGTHPSKNIPNHKASKHMGNGEVLSHQKVHGSL
TDSIVAPQQDTAKAEQAERLANGPKIFSHIAEISNGPSVQNSETLGLRQQHPPHNHSPPP
PAAVSNLQHPPGEEMLSPPANGTSESRSLKRPLEDGDRGDSGIPTKVGVRIVTISDPNNA
GNIATMVAVPAGADPSTVAKVAIENAVQQRTSVPSPLPENNTQQPVSEQTPPPAEQAPQG
SNQSSQAPAPSQDQARKPGQNFKCLWQACRRWFDTPSQVFYHAATHHGSKDAYPGQCLWE
GCGPFPRQRLSFITHLQDKHCSRDALLAGLKLEEQTQGSNTNTSKSPPAAVSSPSLAPRP
QKALANHPSAALMALRRGSRNLVFRDFTAQDDKEGPMTKHIRLTAALTLKNIAKFSDCGR
KLVRRHENHLSVLALSSMEVSTTLAKCLYELTRSLQA
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaacctccccgagcagcggaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccacagcagaggatctccgtttaaaaaggttcccgttgtg
ggtgggaaggagctggacctgagcgctctctatatgagagttgtgtctttagggggcttc
gcaaaggtgtccgacaagaaccagtgggccgaactgggcgaagattttcattttcccagg
agttgctcgaatgctgcttttgttttgaaacagtactaccttcgatatttagagaagtat
gagaaggtgcatcactttggagaggaagatgatgaggagcagccgggaaatccgaaacct
ttacttccgatcggtgcaatacccacatcatacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctgtcagcagaatttgttcctccatccgattacaacaaa
ctggtgctgtctctcctgtctgggctcccgaatgaggtggactttgccatcaacgtgtgc
acgctgctgtccaacgagagcaaacacgccatgcagcttgagaaagatcccaaactcatc
acactgctgctggcgcatgcgggcgtatttgatgactcgttaggaagcttttctgctgta
tttggaacagactggcgggagaaaacttcacgagactttgtaaagttttggaaagaggtc
attgaagacaacgaagtgaaagatctcatctcagacaagagctgcacaccccaaaatgga
tcagagacgaggcacttctgcactcctctcttccacccaccgcgtaacgtgggcattgga
gacatggagggccagcgggtgttgcaggtcgccatgattttgaggaacttgtcattcgag
gagaccaacatcaaactcctggcagctaatcgcacgtgtctgcgcttcctcctactgtgt
gcgcactgtaccttcattcagctgcgtcagctgggtctagacacgctcggcaatgtcaca
ggagagcttcagctggatccagttgattttcgcacaacacatacaatgtttcacaccatc
accaaatgtttgctttcacgggatcggtttctcaagatgagggccatggagatcttggga
aacctcagcaaagcggaagataatagcgttctgatctgcgagtatgtggatcaggagtcg
tatcgagaggtaatttccctcctaactttgccggacatcatgctggtcatctcagctctg
gaggttctctatcagctgaccgagctcggggaggtcacaagctctaaaatcgccacagtg
gacagaagcatagatcttctagtgcggctggtgtcagtggacttgcaaacgtttggaccg
gatgccttgacggcggtaaaactcatcgagcatcaggcatccagctgtcaggtctcagag
gttcgaccacagcttgtagagaacgttccttctcccacgcaaggcactcctggatctgtg
aacagagtggcgctgcagcccacccctccacctggaattgtagaagcagatggagagaaa
tttgcagctcaatggctaaatgcacattttgaggttcactcagagagctctgtgtctcgc
tctgagatgtactcggaatatctggcgtcctgcagtaagatggcgcggggggctgtgctc
acgtccaacaacttttacaaatgcctgaggacgctgtttcctaatcacacggtgaagcgc
gtggaggactcgcggctgagtgggcaggcacaaatccatgttgttggtctgcggaagagg
tcgattcctcttcctgttcagctttattatcatcatcagcaacaacaacatcaggccagt
cctacagtagttcccaaacctgaagtcctctcagattctcctcagccccagtcagtgctc
atccgggcaccagcaccaagccttactgccggccaggcagcaccacaggtggccttgacc
atgcatggtactcccagtgctcctgcgccacccccgactgttccacggctcctgataaac
ccaccaggagaagctgcgcttcccgcctgccctccggccactgccccagtccccccacga
cccaatgacattctgacaacagccatgatccagagctccatccccacatcgtctgctgca
cccacggttcccaaccacaacactgtcaccactgcctctccttcccagcagcccttgctc
caccacgctcctgttacactcatccaacaggggccaccccagggacacatatttgcaggg
cagttgcaaggtgtttgtccttcagtaggccagcaacacctgcctgcccctcaagtgcag
caaggtgccccatcacaggaggccatggtacttgcgcccactcaatatgtgagcgcacct
tgcacgtcgtttttggcaggagggcaagtagttacggtcgcaggtgtacagagcactcat
gggcctcgtgttggatttcaaaacatcgcccccaaacctgcaccacaagctcagtcgctg
caacctcagcagcagcagcaacaactacaacagcagcaaagtctagtcattgtcagtcca
aatccacaacctaccactgcatttgctccagctattcatcaaattgtattgaccaacccg
tcagtcatgcctagtgcaccaactatacagctcccagtgcagcccatggcacagcctgct
gttccaaactcaccggtccctaaccccacacaggtccagcagggtcagccacacacagtc
agccaaatgctctctgtcaagcgtcatcagcagcagtttcatcttcagcagccgcctcaa
cctcctccacctgcccagcctacctccacagaatcaagtctgatcaaacagttactgctt
ccaaaacgtggtccttccacacctggaggaaaactcatactccctgctccccaggtcccc
gcccctgctagcagcacggcgcccagccctcaagttgtataccaggtatccaacagtggt
caggggacacctcagccacagttaaacgtgcagctcatgcaaagtcccttgcaggcgacc
ggtgctgtccccatctccatcctacccggtcagatcatttccaactctacccctggcacc
cttctgcaggcggcacccagcaaccaagttactttcacagtagtgccaaactctggcttc
cctgctgctgcagctgtcagccagggagcgccgacttctatcgttactcaaaccagcctg
tctgtcagcacagccccgcccacaattggactgccattgactccgcctctgccagttgca
ggagccgcttgccccacgccacctttccgaggtgacaagatcatctgccaaaaggaggag
gaggccaaggatgacacagggcttcacatccatgagcgtaggattgaggtcatggagaac
tccgttgctgattgctcagccaaaaccagcaatggggactcggcggaggtggacgggcct
gcaggcaagctgctcaacgggaggaaatttgactcgagtctacctccataccactcaggg
aacagccaggcagaacagggcatgcaggcgcttaatggccctgccacacagggaggcgaa
gggcctgggaagcagatgttggtggaccctaaaaagctcatgttgaatggggtctgtgac
ttagaaagatcagatcccactactggtacccatccaagcaaaaacattccaaatcataag
gcttccaaacacatggggaatggggaggtgctgtcacatcagaaagtacacggttccctt
acggactctatcgttgctcctcagcaggacactgccaaagcagagcaggcagaacgcctg
gccaacgggcctaagatcttcagccacatcgctgagatctccaacgggccctcggtccag
aactctgaaacactgggcctaaggcaacagcacccacctcataaccactccccacctcca
cccgcagcggtatccaaccttcagcacccacctggagaggagatgctctcgcctcccgct
aacggcacctctgaaagccggtcattgaagagaccgctggaggatggggatagaggtgac
tctggaatcccaacgaaagtgggagtacggatagtgaccatcagtgacccaaacaatgct
ggcaacatcgccaccatggtggccgtgccagcaggcgcagatccaagcacagtagcaaaa
gtagcaatagagaatgcagtgcagcagagaacaagtgtgccctctccgcttcctgaaaac
aacactcagcagcctgtatcagagcagactcctcccccagcggagcaggccccccaggga
agcaatcagagttcacaagctcccgccccctctcaagatcaagcacgtaaacctggacag
aactttaaatgtttgtggcaggcatgcagacgatggtttgacacgccgtcacaagtgttc
taccacgcagctactcatcacggaagtaaagacgcgtacccaggccagtgcctctgggag
ggatgtggcccgtttcctcgtcaaagactatccttcattacacacctgcaggataagcat
tgttcgagggatgcgctcttagctggactcaaactggaggagcaaacacaaggcagcaac
accaacacttccaagtctcctccagcagcggttagcagtccttcgctcgctcccagaccg
cagaaagcgctcgctaatcaccccagcgcagcgctgatggctctacgcaggggctcgcga
aatctcgtgttcagggacttcacagctcaggatgataaggagggaccaatgaccaaacac
atcagattaactgctgccttaacgttaaagaacatcgcaaagttctctgattgtggacgg
aagttggtgaggcgacacgaaaatcatctctctgtgctggctctgagcagtatggaggtc
tccaccacgctcgctaaatgcctttacgaactgacgcgctctctgcaggcctga
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integrated database retrieval system
