Triplophysa dalaica: 130421013
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Entry
130421013 CDS
T09616
Symbol
ipo8
Name
(RefSeq) importin-8 isoform X1
KO
K18755
importin-8
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130421013 (ipo8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130421013 (ipo8)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130421013 (ipo8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
TPR_IPO11
Cse1
DUF2709
DUF7342
Xpo1
EF_HAND_1_PLCG
Motif
Other DBs
NCBI-GeneID:
130421013
NCBI-ProteinID:
XP_056604619
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All DBs
Position
5:complement(550544..563031)
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AA seq
1018 aa
AA seq
DB search
MDPNRIIQALKGTIDPNLRVAGENELNQSYKIINFAPTLLQIIVSDQVEFPVRQAAAIYL
KNMVSQYWQDREPMLGEVAFPFNIHENDRGQIRENMVEAIIRCPETVRAQLTVCLRAIIK
HDFPGRWTGVVDKINLYLQSQNSGSWYGSLLALYQLVKTYEFRKAEERDPLLAAMQIFLP
RIQQIITQLLSDATFISVLIQKQILKIFHALVQYSLPLLLLNNTVMTHWMEILRSVVDRG
VPAETLEVDEDDRPELIWWKCKKWALHIITRTFERYGSPGNVTKEYFEFADFFLKTYAVG
IQQVLLKVIDQHRQKQYVSPRVLQQTLSYMTHCVSHSVTWKHMKPHMQTITQEVVFPLMC
YKDEDERLWQEDPYEYIRMKFNIYDDHVFPATAAQTLLCKAARKRKEVLPQMMEFCHQIL
VDPNADPRRKDGALHVIGALAQPLLKKRMYRDQMELMLQNYVFPLLNTNLGYLRARSCWV
LHSFSPLKFHNELVLRNAVELVKQNLVDDKEMPVKVEAAIALQALVSNQEQAKVYIRPFV
RSIMQELLHVIKETENDDLTSVIQKMICEYNQEVAMIAVDMTQNLAEIFSKVLQSEEYEE
SEDKTVMALGILSTIDTILTVMEDHKEITQQLEGICLQVIGLVLQKPIIGMAEFYEEILS
LAFGLTCQSISPQMWQLLGVLYDVFQHDCFDYFTDMMPLLHNYVTVDTNMLLSNPKYLEV
IYTMCKKVLTSDAGEDPECHAAKLLEVIILQCRGRGIDQCIPLFVEAVLERLTRGVKSSE
LRTMCLQVVIAALYYNPTLLIHTLENIRFPHSPEPITAQFINQWMNDTEFFLGLHDRKMC
IIGLSVLMELPSRPAALEEVAGQIIPSVLLLFLGLKHMYASRVLDKPEPLSRAQGSEEDE
NEEIPSDEDEVGEKSTPLQSSCMPTGSDNEDEEDDDDEEYWDDDALEGTPLEEYNTPLDY
DNGEDEYQFFTASLLRVQSSDASWYQSLTSSLSEDQKKQLQEIYNICQQRRSAGVKGL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaatcgcatcatacaggctttaaagggcaccatagatcccaatctaagagta
gcgggtgagaatgaactcaaccagtcctacaagatcatcaacttcgcccctacactgctg
cagatcattgtgtcagaccaggtggagttccctgtgcgacaggcagctgccatctacctg
aagaacatggtgagtcagtactggcaggaccgggagcccatgttgggggaggtggccttt
cccttcaatatccatgagaatgaccgtggccagattcgagaaaatatggtggaggccatt
attcgctgtccggagactgtaagggctcagttgacggtatgcttgcgtgccataataaag
catgattttcccgggcggtggacgggtgtggtggataagatcaacttgtatctgcagtca
caaaatagtggaagctggtacggcagtctgctcgccctctaccaactcgtcaaaacttac
gagttcaggaaggcggaggagcgggaccccctcttggcggcaatgcagatctttctgccg
cggatccagcagatcatcacgcagctcctgtcagacgctactttcatctcagtgctcatc
cagaaacagatcctgaagatcttccacgcacttgtgcagtattccctcccactactgctg
ctcaataacacagtcatgacgcactggatggagattctaaggtctgttgttgaccgtggc
gtcccagcggagactcttgaagtcgacgaggatgatcgacctgagctgatctggtggaag
tgcaagaaatgggctttgcacattatcacaagaacgtttgagagatatgggagtccagga
aacgtcacaaaggaatattttgagtttgctgactttttcttgaaaacgtacgccgtgggg
attcagcaggtgttattgaaagtgatcgatcagcacagacagaagcagtacgtcagtcct
cgggttctccagcagacgttgagttacatgacacattgcgtctcgcattcagttacatgg
aaacacatgaaaccgcacatgcagactataacacaggaggtggtgtttcctctcatgtgc
tataaagatgaagatgaacgactatggcaggaagatccttacgagtacattcggatgaaa
ttcaatatatatgatgatcatgttttccctgccacggccgctcagactctattgtgtaaa
gcagccaggaaaaggaaagaggtcttgccacagatgatggagttttgtcatcagattctt
gtggaccccaacgctgaccctcgcaggaaggatggggcactgcatgtcataggtgccttg
gctcagcccctgctcaagaagcggatgtacagggaccagatggagctcatgttacaaaac
tatgtttttcctctgctgaacaccaatctgggatatttaagagccaggtcgtgctgggtc
ctgcactccttcagccctctcaagttccacaatgagctggtcctgaggaacgccgtggag
ttggtcaagcagaacctggtggacgataaggagatgcctgtcaaagtggaggcagctata
gcattgcaggctcttgtgagcaatcaggaacaagctaaggtctacatccgacccttcgta
agatccatcatgcaagaattacttcacgtcatcaaagaaacggaaaacgacgacctcacc
agcgtcatccagaagatgatctgcgaatacaaccaggaggtggccatgatagcggtggac
atgacgcagaacctggcagagatcttcagcaaggttctccagagcgaagagtacgaggaa
agcgaagataagactgtgatggctctcggtattctcagcaccatcgacactattcttaca
gtcatggaggatcataaagagatcactcagcagctggaggggatttgtctgcaggtcatc
ggtcttgttctgcagaaacccatcataggtatggcagagttttatgaggagatcttgtct
ttggccttcggactcacctgtcagtcaatctcgcctcagatgtggcagctgttgggcgtc
ctatacgacgtcttccagcacgactgcttcgactacttcacagatatgatgcctctcttg
cacaattacgtgaccgtagacacaaatatgctgctgtcgaatcccaagtaccttgaggtc
atttacaccatgtgcaaaaaggtcctaacaagtgatgctggagaagacccagaatgccat
gctgccaaactcctagaggtcattatattacaatgccgtggacgtgggatcgaccagtgt
attcctctgttcgtggaggcagtgttggagcggttaacgcgtggcgtgaagtccagcgag
ttgcgcaccatgtgtcttcaggtggtcatcgcagctctctactataaccccaccctgctg
atccacacgctggagaacatccgcttcccccacagccctgagccaatcacagcgcagttt
atcaaccaatggatgaacgacacagagtttttcttaggactgcacgaccgtaagatgtgc
atcattggcctcagcgttctgatggagctgcccagccgtcccgccgcactagaggaggtt
gcagggcagatcatcccctccgtcctcctcctcttcctgggtttaaaacacatgtacgcc
tcccgagtcctagacaagccagagccgctctccagagctcaaggctcagaggaagatgaa
aacgaggagatccccagcgacgaggatgaggttggagagaaatcaacgcccctgcaatca
tcctgcatgcccaccgggagcgacaatgaggatgaggaggatgacgatgatgaagagtac
tgggatgatgacgctcttgaggggacaccgttagaggaatacaacacgccgctggactat
gacaacggagaggacgaataccagttttttacagcgtctctactccgtgttcaaagttca
gatgcaagttggtatcagtcgctcacatcctcgctaagtgaagaccagaagaagcaactg
caggagatctacaacatctgtcagcagaggagaagtgcaggagtcaaagggctgtga
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