Triplophysa dalaica: 130421084
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Entry
130421084 CDS
T09616
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04217
Necroptosis
tdw04622
RIG-I-like receptor signaling pathway
tdw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130421084 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130421084 (cylda)
04625 C-type lectin receptor signaling pathway
130421084 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130421084 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130421084 (cylda)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130421084 (cylda)
Peptidases and inhibitors [BR:
tdw01002
]
Cysteine peptidases
Family C67
130421084 (cylda)
Ubiquitin system [BR:
tdw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130421084 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
130421084
NCBI-ProteinID:
XP_056604744
LinkDB
All DBs
Position
1:16903953..16921729
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AA seq
951 aa
AA seq
DB search
MSSTLWSQEKPAGFRDDWRFYIVVKECTVEKPGQKTLRIARGSLGQACQERNSLGRTIPP
GKGKRSLRILDQTNVVVSVDERDVMELEEKLAELLFPITNCEERYSLLCNRARLDRARDI
SCGSKVKVQLRSGDEPLPGVVRFKGALLPDPALSGIWFGVELLEEGRGQGFTEGSYQGQQ
LFRCEDECGVFVALDKLELWEDEDLEVDRVNLVDNEPEVEGDVPPLEINSRVLVQTRDGP
ERGTVIFCDLLPGNESLGYYVGVDMDNPIGDWDGIFDGKLLCNFASLEHTRLVPICDVMP
EYSMQDQRQAKAIGCRSGSEKSGSQSKPKCKGLGLQPGNRSKSEFYYTLNGSSVDHPAQS
KAKSTWYIDEVGEDPAKSLTDMPPDFNQASSPSRAPPTTSSLSSDNKFHSLPFSLSRKVG
PNGSMNHGPLSLSAGSVMGEQQEILPPATTPVQRPLSPLQGQPGLEVGSMVEVKENPPLC
GVIRWVGLPPGLQEPLAGLELEEECVGCTDGTFKGIRYFTCPPKKALFVKLKCCRPDSRF
PSLHHSPNPIERCNSIAFGGYLSEVVNENTPPRTENDGLEVMVGKKKGIQGHYNSCYLDS
TLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEIVNPLRIHGYVCATKIMKLRRI
LEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDKKDKV
LVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDTP
RECRICGGLALYECRECYDDSDITPGKIKQFCDKCNTQVHLHPRRKSHRYVRLSVPKELQ
ESVWRQGFYPHQQMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIPQ
VSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagctccacgctgtggagtcaggagaagccggctggttttcgggatgactggcgcttc
tacatcgtggtgaaggaatgcaccgtagaaaagccgggccagaagaccctgcgcattgca
cggggaagcctcggccaggcctgtcaggagcgcaacagcctcggccgcaccattcctcct
ggtaagggtaaacgcagcctgcgcatcttggaccagacaaatgtggtggtgagcgtggat
gagcgggatgtaatggagctggaggagaagctcgccgagctgcttttccccatcaccaac
tgcgaagagcgctacagccttctgtgcaacagagcgcgtctggaccgggcccgtgacatc
agctgcggatccaaagtcaaagtgcagctgaggtctggcgacgagccccttccaggtgtt
gtccgctttaaaggagctttgcttcctgacccagcactgagtggaatctggtttggtgtt
gaattgctggaggagggccggggtcagggtttcacagagggctcttatcagggtcagcag
ttgtttcgctgtgaagatgaatgtggggtgttcgttgcactggataaacttgagctgtgg
gaagatgaagatctggaggtggatcgggtgaatctagtggataatgaaccggaagttgaa
ggagatgtcccaccactggaaattaactctcgggtattggtgcagacacgggatggccca
gaacggggcactgtaatcttctgtgatttattgcctggcaacgagagtcttggctactat
gtcggcgtcgatatggacaatcctattggagactgggatgggatcttcgacggtaaactg
ctgtgtaatttcgctagtcttgaacacacccgactcgtccccatctgtgatgtgatgcca
gagtactccatgcaggatcagaggcaggccaaagccattggctgcaggagtggcagtgaa
aagtctggcagccagagcaaaccaaagtgcaaagggctaggcctgcagcctggcaacagg
agcaagtctgagttttattatactctaaatggcagctcggtcgatcaccctgcccagtcc
aaagccaaaagcacatggtacatagatgaagtcggcgaggatccggccaaatctttaaca
gacatgcctccagacttcaatcaggcctcatccccttctcgggctccacccacaacctcc
tcgctgtccagtgataacaagttccactccctgcccttcagcttgagccgcaaagttggc
cccaatggtagcatgaaccatggccctctctctctgtctgccggctctgtgatgggcgag
cagcaggaaatcctaccacctgcaacaacacctgtccagaggccactttcaccactacaa
ggtcagccagggttagaggtcgggtcaatggtggaggtcaaagaaaaccctccactgtgt
ggggtcattcggtgggtcggcctgcctccagggctgcaggagccgcttgccgggctagag
ctggaggaggagtgtgtgggctgcactgacggcacatttaaagggattcgttatttcacg
tgtccacctaagaaagctctgtttgtcaagctgaagtgctgccggcctgactcaaggttt
ccatccttacatcattcacccaaccccatagaacgatgcaactctatagcatttggtggt
tacctgagtgaagtagttaatgagaacactcctcctcggacggagaatgatggcttagag
gtgatggtggggaagaagaaaggaattcaaggacattataactcctgctatctggactcc
actctgttttgtcttttctcctttagttctgtgttggatacagtgctcctgaggcccagg
tccaagactgatgtagaatattacaaagagacacaagagttactgcgaacagaaatcgtc
aacccactgcggatacatgggtatgtgtgtgccacaaaaatcatgaaactcagaaggata
ttggagaaagtggaagcagcatcaggattcacttcagaagagaaggatcctgaggagttt
ctcaacatcctgtttcatcacatcttgagagttgaccctcttctcaaactacgatctgcc
ggacagaaggtgcaggactgttacttctatcaaatctttatggataagaaagataaagtg
ctggtgccaaccagccagcagcttctggagtggtctttcatcaacagtgacctcaaattt
gcagaggccccatcttgccttataatccagatgcctcgttttgggaaggactttaagatg
tttaataaaatcttcccttctctggagcttgacatcacagatctattagatgacactcct
agagaatgtcgaatctgtggtggcttagctctatatgagtgcagagagtgctatgatgac
agtgacattacaccaggaaagattaagcagttctgtgacaagtgcaacacacaggtacat
ctgcatccacggcgtaagtctcatcggtatgttaggttatctgtccccaaagagctgcag
gagtcagtgtggagacagggtttttaccctcaccagcagatggagctgttcgccgtgctc
tgcattgagacaagccactatgttgccttcgtcaaatacggatctgcagactctgcctgg
ctcttctttgacagtatggctgaccgtgatggtggtcagaacgggtttaacataccacag
gtatccccgtgcccagaagtaggagcctacctgaagatgacccctgaggagctccacgcg
ctagaccccaagaacatccagggctatgcccgcagacttctctgtgatgcttatatgtgc
atgtaccagagtccaactatgagcctctataaatag
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