Triplophysa dalaica: 130421242
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Entry
130421242 CDS
T09616
Symbol
epyc
Name
(RefSeq) epiphycan
KO
K08127
epiphycan
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tdw00535
]
130421242 (epyc)
Proteoglycans [BR:
tdw00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
130421242 (epyc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
Collagen
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
130421242
NCBI-ProteinID:
XP_056605003
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Position
5:complement(7410297..7427141)
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AA seq
710 aa
AA seq
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MVMLVWGLLVLSVAAASPPRYTRQTELDNYDSGHYDGGLDLNNENLYDYGIDESQISNFN
PDEDSDPSHSAYIEEEEEEVAQNPNQRWTVEDREDTEVPITPHLIQSGSGESGTLMGPIA
KGEEELRLTAIDILQISGDISGSGEMNSGAFGDSLSEKASGSGEILGSGGSIASGDILSS
GVSGDLGSGVSGLSGSGLILFSGGEEELLTFGITSQEASGDFGESGFLGESGFPGEFEGP
GASGVPGVSGESGASGFPDVSGESGASGVLEVSGESGASGVPGESGESGASGVPEVSGES
GASGVSAQSGASGVPEVSGASGVPEVSGEFGASGVPELSGASGVPDVSGASGSSGVGEMS
GTSGEPELSGESGAFEIIEISKEPWTSGEPEVSGTSGVPGEPGTSGMLEVSGTSGLPEVS
GEPVTTGVPVEPEPSEEPGESGEIEVPEEPVVTESPEVTTEILLPELEEDGEIFLTTLTT
PQEGTQGEIGSGLPEIDPYIPGMSTCVLCICLVGSVYCDDLRLDRVPPLPKETTHFYARY
NKIAKISKSDFANLNKLKKIDLTSNAISKIDDDAFSGLPALDEVILRENNIRQLPALPPS
MTLIDACHNQLGSTGIQREAFKDMPGLLYLYLTDNNIDHIPVPLPHSLRSLHLQNNNVQM
MHDDTFCNPHDLNYIRNPLEDVRLDGNPINLSRTPQAFICLPRIPVGNLI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgttggtgtggggacttcttgtcctgagtgtggcggcagcctctccccccaga
tatacccggcaaacagaactggacaactacgacagcggacactatgatgggggtctagat
ctgaacaacgaaaacctctacgactatggaattgatgaatcacagattagcaactttaat
cccgatgaggactctgacccttcacatagtgcctatatagaggaggaagaagaagaggtg
gcacaaaacccaaatcaacgttggacagttgaagatagagaagacactgaagtacccata
acgcctcatcttatccaatcagggtctggggagtcaggaactctgatgggccctatcgca
aagggagaggaggagcttcgtctgacggccattgacatccttcagatttctggagacatt
tcgggttctggtgaaatgaactctggagcctttggggactcgctcagtgaaaaagcttcc
gggtctggagagattttgggctctgggggttctatagcctctggtgacattttgagttct
ggggtctcaggggatttaggctctggagtttctgggctttctggttcaggccttatattg
ttctcaggtggagaggaggagctcctaacatttggaatcacttcacaagaggcgtctggg
gattttggagagtctgggtttttgggggagtctgggtttcccggagagtttgagggacct
ggggcttctggagttcctggggtgtccggagagtctggggcctctgggtttcctgatgtg
tccggagagtctggggcttctggggttcttgaagtatccggagagtctggggcttctgga
gttcctggggagtctggagagtctggtgcttctggggttcctgaagtatccggagagtct
ggagcttctggggtgtccgcacagtctggggcttctggggttcctgaagtgtctggggct
tctggggttcctgaagtgtctggagagtttggtgcttctggtgttcctgagttgtctggg
gcctctggggttcctgacgtttctggagcatctgggagttctggtgttggggagatgtct
gggacctctggtgaacctgaattgtctggagagtctggagcctttgaaattattgagata
tctaaagagccatggacttcaggggaaccagaggtgtctgggacctctggggtgcccgga
gaacctggtacctccgggatgctcgaggtgtctggaacctctgggttgcccgaggtgtct
ggagagcctgtaactacaggggtgccagttgagcctgagccctctgaggaacctggggag
tctggggagattgaggtccctgaggagcccgtggtgactgaatccccagaagtcacaaca
gaaatattattacctgaactagaggaagacggggagatattcctaacaaccctgaccact
ccccaggaggggactcagggtgaaatagggtcagggttacctgaaattgacccatacata
ccaggtatgtctacctgtgtgctgtgtatctgtctggttggatccgtgtactgtgatgac
ctcagacttgaccgtgttccaccccttcccaaagaaaccactcatttctatgcccgctac
aataaaattgccaagataagcaagtctgacttcgccaacctgaacaagttaaagaaaatt
gatctgacaagcaatgccatttccaagattgacgacgatgctttctctggccttcctgct
ttggatgaggtgatattaagagagaacaatatcagacaacttcctgccctgccaccctct
atgacacttattgatgcttgccacaaccagctgggcagcactggcatccaaagagaagcg
tttaaggacatgccagggctactttacctctacttgacagacaacaacattgaccacatc
ccagttcctttgccccacagtctgcgctccttgcacctgcagaataacaatgtccagatg
atgcacgatgacactttctgcaatccacatgatttaaactacatccgcaatcccctggag
gacgttcgcctggacggtaatcccatcaacctcagcagaaccccacaagcattcatatgt
ttgccacgtatacctgttggtaaccttatttaa
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