Triplophysa dalaica: 130421378
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Entry
130421378 CDS
T09616
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tdw
Triplophysa dalaica
Pathway
tdw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130421378 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130421378 (vps35)
Membrane trafficking [BR:
tdw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
130421378 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
130421378
NCBI-ProteinID:
XP_056605181
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Position
1:14580223..14602721
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQAEEEMTGDINDSI
DFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKYKQ
VVLSGILEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCADLHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTLLQLKH
FPPLFEYFDYESRKSMSCYVLSNILDFNTTIVAQDQVDAILNLVSTLIQDQPDQPAEDPD
LEDFAEEQSLVGRLIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRHTLPPLVFAAYQLA
FRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTRCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKGGEEIRDGRRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYICFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQ
REAPESEGPAYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggatgagcaggagaagctgctggatgaagcagtg
caggcagtgaaggttcagtcatttcaaatgaagcgctgtctggacaagaacaagctaatg
gatgcactgaaacatgcctcaaatatgttgggggagttgaggacttcaatgctttctcca
aagagctactatgaactctacatggccatctcagatgagctgcattacctggaggtctat
ttgacagatgagtttgccaagggtcgtaaggtggctgacctctatgagcttgttcagtat
gcaggcaacatcatccctagactgtaccttttgataactgtcggagtggtgtacgttcgc
tctttcccccagtcacgtaaagacatcctgaaggacctggtggaaatgtgtcgtggggtg
cagcatcctctgcggggcctgttcctcaggaactacctgctgcagtgcacacgcaacatc
ctgcccgatgatggagagcaggctgaggaggaaatgaccggcgacattaatgactctatt
gatttcgtactgctgaatttcgccgagatgaataaactgtgggtgcgaatgcagcatcaa
gggcacagccgggaccgagagaagagggaaaaggagagacaggagctgcggattctcgta
gggaccaatctggtgcgactgagccagctggaaggcgtcaatgtggaaaagtacaaacag
gtcgtgctgtctgggatcttggagcaggtggtcaactgtagagattctctagcacaggaa
tatctcatggagtgcatcatacaggtctttccagatgagttccatctgcagacgctgaat
ccgttccttcgctcatgtgcagatctgcatcaaaacgtcaacgtgaagaacatcatcatt
gcgctgattgacagattggcgttgtttgctcacagagaagatggacctggaattcctgct
gagatcaagttatttgacattttctcacagcaagtggcgactgtaatacagtcgcgtcag
gacatgccatcggaggacgttgtttccctgcaagtgtctttgatcaacttggccatgaaa
tgctaccctgaccgagtggattatgtggataaagtgttggagagtactgtggaaatcttc
aacaaactcaacctggaacacatcgccaccagcagcgctgtatctaaggagctgaccagg
cttctgaagatccccgtggatacttacaataatattctcaccttgctgcagctcaagcat
ttcccccctctcttcgagtacttcgattacgagtcacgcaaaagcatgagctgctatgtg
ctgagcaacatcctggacttcaacaccaccatagtggcacaagatcaggtcgatgcaatc
ctgaacctggtctccacgctgatccaggaccagccggatcaacctgctgaggatcccgac
ctggaggacttcgctgaggaacagagtctagtgggccgcctcattcatctgctgcattca
gatgaccctgatcagcagtatctgattttaaacacagccaggaaacactttggtgccggg
gggaatcagagaattcggcacactctgcccccactggtgtttgctgcttatcaactggcc
ttccgctacaaagagaactcgtcctcggatgataaatgggaaaagaaatgtcagaagatt
ttctcgttcgcccatcagaccatcagcgctctgatcaaagctgagctggcggagttaccc
ctgaggcttttcctccagggtgctcttgcggccggagagatcggctttgagaaccacgaa
acggttgcctacgagttcatgtctcaggcgttctccctgtatgaggatgagatcagcgac
tcgaaggctcagttggccgccatcaccttgatcattggcacattcgaacgcacaaggtgc
ttcagtgaagagaaccacgagcccctgcgtactcagtgtgcgctggccgcctccaaactg
ttgaagaaacccgaccagtgccgtgctgtcagcatttgtgcccacctcttctggtctgga
cgcaacactgacaagggaggagaggagatccgtgatgggaggcgagtaatggaatgcctg
aagaaagctctgaagattgccaaccagtgcatggacccgtccttgcaagttcagctcttc
attgagatcctcaacagatacatctgcttttatgagcgggagaatgatgcggtgacggtt
caagtactgaatcagctgattcagaagatccgtgaggatctcccaaacctggaggccagt
gaggagacggagcagatcaacaaacacttccacaatacactggaacacctgcgtctgcag
cgagaggcgcccgagtctgagggacccgcttacgaggggctagtgctgtag
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