Triplophysa dalaica: 130421386
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Entry
130421386 CDS
T09616
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130421386 (fbxo18)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130421386 (fbxo18)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130421386 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
F-box-like
Viral_helicase1
AAA_30
F-box
AAA_11
PhoH
AAA_22
ResIII
Kelch_2
CwfJ_C_2
ARM_TT21_N
AAA_12
RnlA_toxin_N
Motif
Other DBs
NCBI-GeneID:
130421386
NCBI-ProteinID:
XP_056605200
LinkDB
All DBs
Position
5:324591..332547
Genome browser
AA seq
1010 aa
AA seq
DB search
MESSMSGRVKRRHLGPSECEDLAQSSSGTRSLTQPFTAEVRNNAPKYRLQPRTPTKKRRQ
AAESDGQQKGITEFFSVTGVISTSPQKDKQTPVKEELAEPLVLQDEDVTQDFMEGITEDM
FDEDMFDEVSVKPEKELSVSVKTEVDEEYPVDSLPDAHYGLLGVQGGDAVPQGHVQDVPD
EILRTLFGHLPAEDLYQHVSLVCQRWRMVAMDPQFHPWKKLYYRYRKREPEAVKEVKSIL
NDNRINNKDDLCLLNMLRYLSGFKHSKRVNVKEVLECVKAHRLYAHAEVCIRHRLPDMTD
SEGPNPWSATALMLILSDGVKDVLDLVALLRRSGCLLTADGISEYLWAVATLLLAMRKNN
INISNRWHYNIFYALHLMENAPPPLGQQSIRPLHVTHEQQQILNHDMQKDHVVKIMAFAG
TGKTTTLVKYAEQRPRSRFLYLAFNRSVAVQARQLFPRNVECHTVHSMAFKAVGVRYRQK
LTSNLKPFEVAWVLPKDHGGFVNAKVVTQTMNGYMASIDQRIGMQHVPLEYKNTRGHMVH
PDEQQRRMFADFAQKIWDKMVELQRRKERAYNMTHDGYLKLWQLSRPKLDGYDVIFIDEA
QDCTPVIMDIMLSQKCGKVLVGDPHQQIYTFRGAVNALHSVAHTHIYYLTQSFRFGSEIA
YVGATILESCKKVEQILVGGSQDGYVKGEDTQALELLKQGQKLSQEGSVAILSRSNVTVF
NEAVRLTDANPDCKIYIVGGVEHFGLEKIMDIWVLMQPEEKRKSENLTIKDYFIRTFCRE
KMGGYGGLKGYATASEDRELVAKLAVVEKYHKRIPELVQQIYGRVQRNPQCADYLLGTVH
KSKGLEFDTVVVTDDFTKVPCARHNLQRVGSFSTASVPDDEWNLLYVAVTRAKRALYITK
TISNLHTFAGEYFLRSQLTSTLLSSDPSPICSIADCENHITADSALSMCKLPIRYTDDVD
EGGVLCLTCVDQRVGPVAFLLSPPEVVRSMTYTDERMALPINVAMLLALF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccatgagtggaagggtcaaacgcagacatctgggcccgtcagagtgtgaa
gatttggcgcagagcagctcggggactcgatctctcacacagccattcactgccgaggtc
agaaacaatgctcccaaatacagacttcaacccagaacacccaccaaaaaaagaagacaa
gctgcagaaagtgatggacaacagaagggcattacagagttcttctctgtgactggagtc
atcagcaccagcccccaaaaagacaagcagaccccagtgaaagaggaactcgctgaacct
ctggtcctacaagatgaagacgtaacacaggacttcatggaaggcatcacagaagacatg
ttcgatgaagacatgtttgatgaggtcagtgtgaaacctgaaaaggagctctcggtgtct
gtgaaaacagaagtggatgaagagtaccctgtggacagtctccctgatgcccactatggg
ttgctcggagtgcagggtggggatgctgtgccccagggtcacgtccaggatgttcccgat
gagatccttaggaccttgtttggtcacctcccagcggaagatctttatcaacacgtcagc
ctggtgtgccagcgctggagaatggtcgccatggacccacagtttcacccttggaagaag
ttatactacagataccgtaaacgggaacccgaggcagtgaaggaagtgaagtctatcctg
aatgataatcgcattaacaataaggatgacttgtgtctcctcaacatgctgaggtacctg
tcaggattcaaacacagcaagcgagtgaatgtaaaggaggtgttggagtgtgtgaaagct
catcgtctctacgctcatgctgaggtctgcatcagacacagactgccagatatgacggac
tctgagggtccgaacccttggtctgccacggccctgatgttgatactgtctgacggagtg
aaagacgtcctggatttggtggctctattgcggaggtcaggatgtcttctgacagcagat
ggaatctcagagtatctgtgggctgtggcgactttgcttctggccatgagaaagaacaac
attaatataagcaacaggtggcattacaacatcttctatgccctgcatttaatggagaac
gcgcctcctcctttgggccaacaaagcatcagaccgcttcatgtcacacatgaacaacaa
cagattctcaatcacgatatgcaaaaagaccatgttgttaagataatggcttttgcaggc
actggaaagactacgacactagtgaagtacgctgagcagaggccacgctcgcgctttctc
tacctcgccttcaacagatctgtggcagtgcaagcgcgacagttgttcccacgcaatgtg
gaatgccatacggtccattcaatggccttcaaagctgtgggagtgaggtataggcagaaa
ctaaccagtaatttgaaaccgtttgaggtggcgtgggtcttgccgaaggatcacggcgga
tttgtcaatgctaaagtggtgacgcaaaccatgaacggttacatggcgtccattgaccag
cgcattggcatgcagcacgttccgttggagtacaaaaacactcgcggacatatggtgcat
ccagatgaacagcagagaaggatgtttgcagattttgcacagaaaatatgggacaaaatg
gtggaattgcagcgcagaaaagagcgagcctacaacatgacccatgacggttacctcaaa
ctctggcagctgagccgaccgaagctggacggttatgatgtcatatttattgatgaagct
caggactgcacaccagttatcatggacatcatgctctcacagaagtgtggaaaagtcttg
gttggagaccctcatcagcagatttacaccttcagaggggcggtgaacgccctgcacagt
gttgctcacacacacatctactatctcacgcagagtttcaggtttggctctgagatcgcc
tatgttggtgccacaatattagaaagctgtaaaaaagtcgagcagatattggttggtggg
agtcaggatggatatgttaaaggagaggacacacaagcacttgagcttctgaaacaggga
caaaaactgtcacaagaaggcagcgtggccattctgagccgcagtaatgtgactgtattt
aatgaagctgtccgactcacggatgccaaccccgactgcaagatctacattgttggaggc
gttgaacactttggactggagaaaattatggatatctgggtcctgatgcaacctgaggaa
aaacgcaaaagtgagaacctgacaatcaaagactacttcatccggactttctgccgtgag
aagatgggtggatacggaggtttgaagggatatgccacagcctctgaagaccgtgagctc
gtggccaaacttgctgtggtggaaaaataccacaaacgcattccagaactggtgcaacag
atctacggacgtgtccagagaaatcctcagtgtgcagattatcttctcggtacggtgcac
aagtctaaaggcctggagttcgacactgtggttgtgacggacgacttcaccaaagttccc
tgtgctcgacacaacctgcagagagtgggcagtttcagcacagcgagtgtcccagatgat
gagtggaacctgttatacgtggccgtcacacgagccaaaagagctctttacatcaccaag
accatcagcaacttacacacatttgctggggagtacttccttaggtcgcagttgactagc
actctgctaagttcagacccgtctcccatctgctcaattgccgactgtgaaaaccacatc
acagcagattcagccctcagcatgtgtaaactccccatcagatatacagacgatgtggat
gagggaggtgttctttgtttgacctgtgtggaccagcgtgttggacccgtcgccttcctt
ctctctcctcctgaagtggtcagatccatgacctatactgatgaaagaatggctctgccc
atcaacgttgccatgctgttagctctgttttaa
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