Triplophysa dalaica: 130421506
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Entry
130421506 CDS
T09616
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130421506 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130421506 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tdw00537
]
130421506 (cntn1b)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
Contactins
130421506 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tdw00537
]
Others
130421506 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
CsgH
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
130421506
NCBI-ProteinID:
XP_056605394
LinkDB
All DBs
Position
5:6175606..6185170
Genome browser
AA seq
1029 aa
AA seq
DB search
MVTPVMLLSILSTLFLSVAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRVRANPPAVIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKGKHAGKYVCVANN
VYGVVISKEAIVKFGYLNQFPTDEREPVNVKEGQGAVLLCSPPSRYPSEVLFRWIYNDFP
NFIIPDQRRFVSQTTGNMYIAKVEASDVGNYSCFVSSPTIGKSVFSMPIPLIPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLL
NVQYEDEGSYECETLNIKGMDWYRQWLYVEGPPEWAEHINDTERDVGTELTMRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENEWGTIYANAELRVVSCAPTFIYN
PVKKILLGAENGRVVIECKPRAAPKPKFIWKRGSELLNNSSRMLIWSDGSLEILNATKSD
EGSYTCYAENDRGKGNSTGTLTITEATKITVAPSVSEAVVGDSIVLQCSASYDPSLDITF
IWTVDSHTINFFTEWDHYELLRGPESSGDLLIKNIQANHAGRYSCTAQTIVDNATAEADV
FVKGLPGQPGGVRVEEIKDTSVKLRWCLGSDHGSPLIQHVVQTRDFYALDLEDWKTASTT
PVFLDGSAESATVVDLYPWMQYEFRVYAINEFGAGECSRPSIKIKTWDARPTMAPSDVNG
QVGITGELIVTWSPVNPQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPETRRYIYREKMTP
DSEIQVKVSTFNNKGEGPASLISVVFSPRLAPSEAPLDVYARQVTSTEALVWWLPVYQSP
PNWVDGYQIRYWRKYDDNEAAAGRVLVHRMVNQTRLENMRPDSHYLIEVRAFNGAGLGPP
SEHCEMFTRRPPPSRRLRVYKYVSFNRKWLYLYWDHIYNYWNESYVEGYKILFRKEGERY
GKLYTTGRHYIDFPMPETGDYVIEVRARCEGGDGPISQIRVQGKAALGATSLSLVSLVLL
ALGWMNLIL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccagtcatgcttttgtccatcctctccaccctcttcttatccgtcgctgcg
attaagcccaggatctttgaacccagaatctttgacaaggaggctacaggctttggtcct
atatttgaggaggaaccactggacacggtgtatgcagaggattccccagaaaacaaaata
tccatgaactgcagggtgcgagccaacccaccagccgttataaaatggtggttaaacaac
tgggaaattaaactgatggaacagcctgatgagcactttagcctggtgggcggaaacctg
gtgatcaccaacccagacaaagggaagcatgctgggaaatacgtttgtgtggccaataat
gtatacggagtggtcatcagcaaggaggccatcgtcaagtttggatatctgaatcagttc
cctacagatgagcgggagccagtgaatgttaaagagggtcagggggcggtgctactgtgt
tcaccaccctctcgctatccaagcgaggtgctgttccgctggatctacaacgactttccc
aacttcatcatccccgatcagaggcgctttgtgtcccagaccactggcaatatgtacatc
gctaaagtggaggcctcggatgttgggaattattcttgctttgtgtcaagcccgaccatc
ggcaagagtgttttcagcatgcccatacctctgattccacaaatcgagaaggaggtgaag
agatatcctgcagatattcgtgtcaaatttcccaagacatatgctttggtgcatcagaac
atcactttggagtgctttgcccttggaaatccactcccacacatccgctggaggaaattg
gacgctgatcttccacccaactacgaggtcagcatgaatggagctttgctgcatttgctt
aatgtgcagtatgaagacgagggcagctacgagtgcgagaccctcaacatcaaggggatg
gattggtatcgccagtggctctatgtggaaggtccaccagaatgggcggagcacatcaat
gacacagagagggatgttggcactgagctcactatgagatgtgtcgctgtggggaagccg
ttgccatggatacgctggctgaaggatggctactcatatggtaaaggggagcttaaattt
tccagtctaacatttgaagactcaggcatgtatcagtgtattgctgaaaacgaatggggg
accatctacgctaatgcagagctacgggtcgtctcgtgtgcaccaacatttatttataat
ccggtgaaaaagattttgctaggggctgaaaatggacgcgtggtgatagagtgcaaaccc
cgcgctgctcctaaacccaagtttatctggaaaagaggttcagaactgctgaacaactct
tcaaggatgcttatctggagtgatggttctctagagattctgaacgcaacgaaaagcgac
gagggctcatacacgtgctatgctgagaatgaccgaggcaaaggcaacagcacagggacc
ctcactatcaccgaggccaccaagatcactgtagctccatcagtctctgaagcggttgta
ggtgacagtatcgttctgcaatgttctgcatcctatgaccccagtctggacatcaccttt
atttggaccgtggactctcacaccatcaacttcttcacagaatgggatcattatgagctg
ctcaggggtcccgagtccagtggagatctgctgattaagaacattcaggcaaaccatgcg
ggacgttacagctgcacggcgcagactatagtagacaacgccactgctgaagctgatgtc
tttgtcaaaggtttgcctggacagccagggggcgtccgtgtggaagagatcaaagacaca
tcagtaaagttacgttggtgtctgggatcagaccatggcagtccactcatacaacatgtt
gtgcaaacacgagacttctatgcattggaccttgaagactggaaaaccgcatccaccact
ccggtgtttttggatgggtcagcggagtcggccaccgtggttgacctttacccctggatg
caatatgaattccgtgtgtacgctatcaatgaatttggagctggggaatgcagtcgaccc
tccattaaaatcaagacatgggatgccaggccaacaatggctcctagtgacgtcaacggc
caagtgggaataactggagagctcatagtcacctggagccctgtgaatcctcagttcttc
ttcggtaaaaaatttggctacgtcgtggcgttcaagcagcacgaggattacgagtggaag
tggtcgaccgtggaggatccggagaccagacgttacatctacagagagaaaatgacacca
gacagtgagatccaggtgaaagtgagcacctttaataataaaggtgaaggacccgcgagc
ctcatctcggttgtcttctcaccaagactcgcaccaagtgaagctccattagatgtttac
gcccggcaggtaacctccacagaagctttagtctggtggctacccgtctatcagtcacca
ccaaactgggttgacggataccagattcgttactggagaaaatacgatgacaacgaagcg
gctgccggtcgagtcctggtgcacagaatggttaaccaaacacgtctggaaaacatgcga
cctgactctcactatcttatagaggtacgagcgttcaatggagccgggctcgggcccccc
agcgaacactgtgagatgttcacaagaagaccacctccaagtcgccgtttgagagtgtac
aaatatgtcagcttcaaccgcaaatggctctatctgtactgggatcacatctataactac
tggaacgagtcttatgtggagggttacaaaatattgttccgtaaagaaggcgagcggtac
ggaaagctttacaccacggggagacactacatagacttccctatgccagagactggagat
tatgtcattgaggtcagagcacgctgtgagggaggtgatggacccatatcacagatcaga
gtgcaaggtaaagcagctctgggtgctacatctctcagcctggtctctcttgttctgttg
gctttgggctggatgaatctaattctttag
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integrated database retrieval system