Triplophysa dalaica: 130422342
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Entry
130422342 CDS
T09616
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04512
ECM-receptor interaction
tdw04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130422342 (frem1a)
04518 Integrin signaling
130422342 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tdw04091
]
130422342 (frem1a)
Lectins [BR:
tdw04091
]
C-Type lectins
Lecticans
130422342 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
CReP_N
Motif
Other DBs
NCBI-GeneID:
130422342
NCBI-ProteinID:
XP_056605468
LinkDB
All DBs
Position
1:complement(5387502..5415460)
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AA seq
2171 aa
AA seq
DB search
MALKNRTLLSFFFLGLLHQIQGSLVKTNRGLKVKIGQSVFLQEIELQFNIPRGKDTCKVE
VVLNEPITQRVGTLYPLVFDCHFLDDEVKYTHNGCPILKEDTVKLRLYRFTETETYTEVF
NLHIEIMEPDCNVIKFGPQNLEVPEFYGLSNVLDGNIVSFHYDHRHSIECTVQLTTLETH
LPAHGQLVTGQPEIPDGPRGDEPDSFVPLRRQLDNKARAHCKSDDCLKGMKLLKITKVPC
GDFLMMGIRYHHIDPPSPDIDYIAIRLDLTDTRSRSIIQSEHAWIPVTIKDAVTNQPPNP
AFMSMFILEVDQFILTPLSTATLDAEDDETPKQMLVFNITKSPSQGFITHLSDHTKPISS
FTWMDLNDMLIGYQPPNSSHTQRRNYEVEFEVHDFYFKKSQPVMVHISIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQLQIVDNDNLKAVKIITVDGLQHGRLSVRGGKSFLFTVNDVK
EGVVRYHHDDSDTTKDYIVFRITDGLHQTRHKFPINILPKDDSPPFFITNMVLELSEGQT
ALLRGSILQACDMDSSDDYIMFKVTRPPQAGEIMKMPGPGITGYPVSRFLQKDLFHSIIY
YRHSGNEIFEDSFEVVLSDFHDPPNLSVPQVIVIQIQPVPDQPPQEAAGVIRHLVVNETD
VIYLTKQQLHFIDLESPDSELTYTVTTPPFYSSSYGKPDAGRLFLVDSIPKFHKDHNAPM
LRLFTQHAVNYMKVAYMPPIPDIGPYRQHIQFVLSVTNKQGSTTTGICFNITVLPVDNLA
PEVHVKQLTVDEGGECWVTEDHLHLTDQDSLEDSLHVEIKRKPQHGNIFLDGKPLSPGQM
FTIRDLKSLKVRYHHDNSETEQDAFQFIATDGINTADFVLHVKVTPVNDEVPVLVPGLKP
VLSCAEGQEVVITVEYICATDPDSDDGTLMLMIARQPYYGVVQRNGIVVDRFRQADITAG
VISYRHTGQEIGLQPRHDIITFVISDGESVSSCCDGRRQTPRLQNSLPLYDLNITVYPVD
NQPPSIDAGELFVLDEGGFASITATHLIVTDQDTRPEDLEVILVSPPKFGYIENILPSPG
FEKSNMGISIASFTHRDVLNGHINYVQFRHQRMEPTTDQFMLRVSDGKQQSSPVPFYIII
SPTNDEIPDLLARNITVREGDMTVLDPTVIDAVDLDIPRDRLTFSVIQQPQHGSIMGVAH
GNDVTFHKRLKNKRGSEIPIEHFTMDDLRNGMSVMYMHDDSESQTDIFIVQLSDGKHQLQ
RSVHVKVLPVNDEEPHIIRNTGIQIEAGESRLLSSAVLNAQDKDTPSCDIIYVFETVPNH
SVLQIKVGTDWVALSAGMNCSQEVLDMNLLRYLHTGQPGARTTDFFVFHLFDGKNRSPAQ
HFHITVKELEKGDLVLFVKPVKTSRGERVVLTTDVLLAVDGTDKPEELLYVITVPPAHGH
VEYIKHTGVQVRSFSQMDVAANLVCYVHNNRADSPKETLRFVVSNGKSTRNGTLEIFVEL
TDKILPNLVHNAGLQVPQGSTITLSPDVLLLSDSDTPATALIYKVLQPPQYGQLLLKGHP
LVTGGNFTQKNIQDLCVAYRHAGGSSQIDRFAFIASDTTDRGFLVDGKVQTGPSFFTLQI
EALDSSAPQIVTLQTLWKVELMKDGRYGIFISSRELKAHATNSPDYRLIYHILRAPYHGY
LENSTNGEFVRQRFSQRDLNRRNILYIINSAVDALTDSLEFSVSDALGNTGPSYKLEFSW
ASVELTMTDYVICESQRSVSLNIQRRGNVQDSSFVTVQVKELTASAGKDFIPASSSLIQF
DPGASSRVWRTEIVQDSLEEAEEKFEVNLALPVGAVLRGNTKATILIMDKNGQCSENNFK
VNTDLEGSEMKPGSHPQHGSIHVEVLPLSQGYIRGDGDLIVQTPVATKKRLRVNGNGKMV
QPSEIIRQGSDTIFKYHGIMSLAVEEDNIASLTGRKAQVKVTSRGQQRSVPVREAKLQTA
AHTNTQDLQHFKTQKIPSKPSSKPCSPELTGFLHYDETSGQLLRCNGDTWRPWTPTNETV
KAQKCSPGWTYHNNYCYFLSTERKATWSGAARACRESFNGNLVSILSKADMDWLWDFGVR
KPFWIGLNDRESKGRWEWVGGEPVTYTNWRRNPPKKMKGTRKCVLVWRKTKWQMRDCKKG
KGHRYVCNVKT
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atggctctaaagaacaggactcttttgtcctttttttttcttggacttttacaccaaatt
cagggctctctggtgaagaccaatcgggggcttaaggtgaagataggccagtctgtcttt
ttacaggagatagagctacagtttaatattccaagaggaaaagatacatgcaaggtggaa
gttgtgctgaatgaacccattacacaacgggtcggcacactttatccactggtttttgac
tgtcactttttggacgatgaagtgaaatacactcacaacggatgtccaattttaaaagag
gatactgttaaacttcgtctatatagatttacagagacagaaacctatactgaggtattc
aatctacatattgaaatcatggagcctgactgtaatgttattaagtttggaccacagaac
ctcgaggtaccggagttctacggcctctccaatgttctagatggtaacatagtgtctttt
cactatgaccatcgtcatagtatcgaatgcacagttcagctgacaactctggagacacat
ctacccgctcacggtcaacttgtcaccggccagcctgagataccagacggaccaagagga
gatgaaccagacagctttgttcctttacgaagacagctggacaataaagccagagctcat
tgtaaaagtgacgactgtctaaagggcatgaaactgttaaaaatcactaaagtaccctgc
ggtgatttcctaatgatgggcattcgataccatcacattgacccgccgtctccggatatc
gactacatcgctattagactggaccttacagacactcggagcagaagcataatccagtca
gagcacgcctggatcccagtgaccattaaagacgctgtgaccaatcagccacccaatcct
gcctttatgtctatgttcatcctggaggtggaccagttcatcctgactccactctccacg
gcgacgctggatgcagaggatgatgagacacccaaacagatgctggtgttcaacatcaca
aagtctccttctcagggtttcattactcatttgtccgaccacactaaacctatctcctcc
ttcacctggatggatctcaatgacatgctaatcggctaccagccaccaaactccagccac
actcagcgcaggaactatgaggtagagttcgaggtgcatgatttctactttaagaaaagt
cagcctgtgatggtacacatctcgatcaggacagctgataccaatgcacctcgagtgtcc
tggaacatgggcctcagtctactggaaggtcagtctcgtcccatcacatgggatcaactg
cagattgttgacaatgacaacctgaaagcagtaaaaatcatcaccgtggacggccttcaa
catggaagactttccgttcgaggtggaaaaagctttctgttcactgtaaatgatgtaaag
gaaggtgtggtacgataccaccacgatgacagcgacactaccaaagattacatagtcttc
cggattaccgatggcctgcatcaaactagacacaagtttcccatcaacatcctgcccaaa
gatgacagcccacccttcttcattaccaatatggtgctggagctttctgaaggtcagacg
gctcttctgagaggatccatcctgcaggcctgtgatatggactccagcgatgactacatt
atgttcaaagtcaccagacctccccaggcaggagaaatcatgaagatgcccggtcctggt
ataacaggttaccctgtgagccgttttcttcagaaggaccttttccattccatcatctat
taccgccactcaggcaatgagatttttgaggattcttttgaggtggtgttgtccgatttc
cacgatcctccaaatctttcagttccccaggtgattgtgatacaaatccaacccgtccct
gatcaacctccacaagaggcagctggtgtgataagacacttggttgtcaacgagacagac
gtcatctacttgaccaaacagcagctgcattttattgatctggagtcgccagacagtgag
ctcacatacaccgtcacaaccccacccttctacagctccagttatgggaagccagatgca
ggaagactgtttctggttgacagcatcccaaaattccacaaagaccataatgctccaatg
ttaagacttttcacacagcatgcagtcaactacatgaaagtagcttatatgccccccatc
ccggacattggaccataccgccagcacatccagtttgtcctctcagtgaccaataaacaa
ggcagcacgacgactggaatctgcttcaacataacagttctaccagtggacaacctggca
ccagaggtgcatgtgaagcagctgacggtggatgagggaggagagtgttgggtgactgaa
gatcacctgcatctaactgatcaggactcacttgaagactctctgcatgttgagataaag
agaaaacctcagcatggaaatattttccttgatggaaaacctttgagtccaggccaaatg
ttcacaataagggatctgaaaagcctaaaagttaggtatcaccatgacaactctgagaca
gagcaagatgcttttcaattcatcgccactgatggcatcaatactgccgactttgtgcta
catgtcaaggtgacaccggtcaacgacgaggttccagttctagtcccagggttaaaaccc
gttttatcctgcgcggagggacaggaagtggtcatcactgtagagtacatctgtgccaca
gatcctgacagtgacgatggcacattgatgttaatgatcgcacggcaaccatattatggg
gttgttcaaaggaatggcatcgttgtcgatcgctttagacaagcggatataactgctgga
gtaatttcctataggcacacaggacaagagattgggcttcagcctcgccacgacatcatt
acatttgtgatctctgatggagagtcagtttcttcatgttgtgatggcaggagacaaaca
cctcgtctacaaaacagcctgccgctttatgatcttaatatcactgtttatcctgtggac
aaccaaccaccatctattgatgctggagaactctttgtattggacgagggtgggtttgct
tctatcacagcgacccatctgatagttacagaccaggacacccgtccagaagatctggag
gtcatccttgtttctcctccaaagtttggatacatagaaaacattcttcccagccctggc
tttgaaaagagtaacatgggaatcagtattgcttcttttactcatagggatgtgttgaac
ggacacatcaactatgtccagttcagacaccagaggatggagcccaccactgaccagttc
atgctgcgtgtatctgacggaaaacaacagtcgtctccagtcccattttacatcatcatc
agtccaaccaatgatgagattccagacttactggctagaaatatcacggtcagagaggga
gacatgacagtgttggacccaactgtaatcgacgcggtggatctcgacattccgagagac
cgcttaacgttcagcgttattcagcagccccaacatggatccatcatgggtgtggcacac
ggaaatgatgtgacgtttcacaagagactcaagaacaagcgtggatctgagataccaata
gaacactttacaatggatgatctcaggaacggtatgagtgtgatgtacatgcacgatgac
tcggagagtcagacggatatattcatcgttcagctctctgatggaaaacaccagctccag
agaagcgtgcatgtgaaagtgctgccggtcaatgacgaggaaccacatattatacggaac
actgggattcagattgaggctggagagtctagacttctctccagtgctgtgctcaatgcc
caagataaagacactccctcctgtgacatcatctacgtctttgagactgtacccaatcat
agtgtccttcagattaaggtaggcacagactgggtggctctatctgcgggaatgaattgt
tctcaggaggttttggacatgaacctgttgcgttaccttcacactggccaacccggagct
cgtaccactgacttctttgtcttccatctgtttgatggcaaaaatcgctctcctgctcag
cacttccacattactgtcaaagaactagagaaaggagatctagtattgtttgtgaagcct
gtgaaaaccagtcgtggggagcgtgtggtcctcaccacagatgtgttattggctgtggac
ggtactgataagccagaggaacttctgtatgtcatcactgtacctccagcacatggacac
gtggagtacatcaaacacacgggtgtgcaggttcggtctttcagtcagatggatgtagct
gcaaaccttgtgtgctacgtacacaacaacagagcagattcacccaaagagacactgcgg
tttgtggtcagtaacggcaaatcaacccgcaatggaaccttggagatctttgtggaactg
actgataagattctgcccaaccttgtgcataatgccggtctgcaggttcctcaagggtcc
accataactttatctcctgatgtcctgctcctgtctgactccgacacccccgccaccgcc
ctgatctacaaagtgctccaacctccccagtatggccagctgctcctgaagggtcatcca
ctggtcacaggcggtaatttcacccagaagaacattcaggatttgtgtgtcgcatacaga
cacgcgggtggatcttctcaaatcgatcgcttcgcattcatagcctctgataccacagat
agaggctttctggtggatggaaaagtgcaaaccgggccttctttcttcacactacaaatc
gaagctctagacagctccgcaccacagatcgtaacgcttcaaactctgtggaaagtagag
ttgatgaaagatggacgttatgggatctttatatcatctagagaactcaaagctcacgct
acaaactcgccagactaccgtcttatataccacatcctcagagcaccttaccacgggtac
ctggaaaattcaaccaacggtgagtttgtaaggcagcgtttctctcaaagggacctgaac
agaaggaatattctctacattataaactcggctgtggatgctctgactgacagtcttgag
ttttctgtttctgatgctttgggcaatactggaccctcgtacaaactggagttcagctgg
gccagtgtggagctgaccatgaccgattatgtgatatgtgagagtcagagatcagtttct
cttaacattcagaggagaggaaatgtgcaggactcctcttttgtaactgtacaggtaaaa
gaacttacagcatctgctggaaaagattttattcctgcttcctcatctttaatccagttc
gacccaggtgcgagcagtcgagtatggagaacagagatagttcaggactctttagaagag
gctgaggagaaattcgaggttaatttggcactcccagtgggtgcggtattgagagggaac
acaaaagccaccatcctcataatggacaaaaatgggcaatgcagtgaaaacaatttcaaa
gtaaacactgacctggagggttcagagatgaaacctgggtcgcaccctcaacacggctca
atccatgtggaggtgttgcctttgtctcagggatatatcagaggtgatggtgatttaatc
gttcagactcccgtcgctacaaagaaaagactcagagtcaatggaaacggcaaaatggtt
caaccttcagaaattattcgccaaggatctgataccatttttaaatatcatgggatcatg
tcgctggcagtcgaggaagacaacatagcttccttaacaggtagaaaggctcaggtgaag
gtgaccagcagggggcagcagcgctctgttccagtcagagaggcaaaactacagacagct
gctcacacaaacactcaagatctacaacattttaaaacacaaaagatcccgtctaaaccc
tcttctaaaccctgtagcccagaacttactggctttcttcattacgatgagacctcaggt
caactcttacgctgtaatggtgacacctggaggccctggacacctacaaatgagactgtg
aaagcacagaaatgctctccgggatggacgtaccacaacaactactgttactttctcagc
acggaacgcaaagccacatggagcggcgcagcacgggcgtgcagagaaagcttcaatgga
aacctggtcagtattttgtcaaaagctgatatggactggctttgggacttcggcgtcaga
aaacccttttggattggtctaaatgaccgtgaaagcaaaggcaggtgggagtgggtcggt
ggagagcctgttacttacaccaactggaggaggaaccctccaaaaaagatgaagggaaca
agaaagtgtgtacttgtctggaggaaaacaaaatggcagatgagagattgcaagaaaggg
aaaggacatcgctacgtgtgtaatgttaaaacatga
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