Triplophysa dalaica: 130424320
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Entry
130424320 CDS
T09616
Name
(RefSeq) methyl-CpG-binding domain protein 5-like isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
tdw
Triplophysa dalaica
Pathway
tdw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130424320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130424320
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130424320
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
130424320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
TP_methylase
Motif
Other DBs
NCBI-GeneID:
130424320
NCBI-ProteinID:
XP_056605848
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All DBs
Position
6:complement(21462..53159)
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AA seq
1313 aa
AA seq
DB search
MNGGKERDGGEGKGHLAQVPIGWQRKVETTGVIYISPSGSVLACLDQVKSYLLTDGTCKC
GLECPLILPKVFNFDPGAVVKLRTAEDVKADEDVTKLCIHKRKLIAVATLHKSMELPPPS
LTLTSPGGGTRVTSINNPNSTAQSRAIRSKTHEAECKNPFKAMMAAGQRHFSPELCGPLQ
QDLYAGYSRQRLSSSEPGLKSPFRSGHGVMLSPPSQPFGDGSLSPRTDIIGSPDGFMRNN
PCGFQGTSSPSATHTNSRIPLSSPGIMIHISPAAQQSSCVMAGRTNMPLSPPVPNKSPVM
KKTLCNYSASLDSSRTAFHHKASPAPAPSLPPPCALQNKQVSSEKDPLGILDPIPSKPNP
PPPFQPNAQVPMMNVNIPPAIVPLPSNLPLPTVKPGPVGHGTHLQRTQHVTASSISSSPV
TSPVHMSGLALGRMEVSPQRSRSSSTSSEQGSFAVPPCSSMKVPPRSPRSSMNSPRPALP
SSPSGKPDSLHQYKEMPNQLLTSMSSSMSGQHNLMYSTASGNNTLQKEHPGLLGMPLNQI
INQHNAASFPASSLLSAAAKAQLANQNKVGGNGTGSAASAGSAGGADAGRTVEGHSALNP
MLPPNSAMMMPGSEGQSGRAALRDKLMAQQRDPLRKRKLPPNAGNHENNYFNVLKTDVGG
MRAPCPSAEQMRKTSRLPPTTSMAQLLQSLSNHSSHMARGRNPGLVGPSRAHFVEGVVPS
GAVHASMQVQQRMLGQTEAMLCPGVESVPSQFPGVLNQMQATTMGNCGPINHSGQVPLGN
HGMGHVSSHFQQHSQPNINCMMPSSTDACCSQPITDTGNPSPLICSIGGAPQMPGVMAAT
GHLYQQQMHPALQGMHGVSTYQSQGHPFPSTPFTDSTAPHPNSLPCLYQDYPGCMSDSSQ
PGMTSHSGATGMYRDGAQKLQGDVSMAGASGVQSSVDAIYRAVVDAAGKGMQVTITAGES
SSTQASPVPALSAMSAFTASIGQPLSLPHAVNAVIHAPRSSDGADSISQPHRARPQLNKR
TRRTSEQGKNTSDGGDTHEYFRSRSAATQMRLQWDEPNQTHWRGEEFLECSTQVHTGSCG
SKVERTSLMKTMGRTRDPVDSQMGESGNLRLNNCIVGSVRERGEPPQLNGTLPRTTYREP
FTGDDQSPGSSTSLEGPLVKDYTHFNGHFNGHCVPSPSDTKSLSSEEELRHPDSPSADLL
HYRPRAFNVGELVWPIKGFPPWPNKLMGEEHEHNPSMQLSEQAKVEPEQLKCLTQDLQAL
DRVSRKNRKAGNLNHHLEAAIHEAMSELDKMSGNVHADRQIKLPKPKRRKISR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggaaaagagagagatggaggagagggcaaagggcatctcgcccaggtgcct
attggctggcagcgaaaggtggagaccacaggtgtcatttatatcagtccaagcggatca
gtgctggcctgcctcgatcaggtgaagtcttacctgctgactgatggcacctgtaaatgt
gggctggaatgtccactcattctccccaaggtttttaattttgatcctggtgcggtggtg
aagctgaggactgcagaggatgtaaaggctgatgaagatgttaccaagctttgcattcat
aagaggaagcttattgctgtggccacgctgcacaagagcatggagctgccacctccttcc
ctaacgcttaccagtcctgggggcggtacaagagtgacctccataaataaccctaactca
actgcacagtctcgagcaataaggagtaaaacccatgaggccgaatgtaagaacccattt
aaggcgatgatggcagcagggcagcgacacttctctccagagctgtgcggcccactgcag
caggacctttacgctggatactccaggcagagactgagcagcagtgagccaggactgaag
tctccgttccgcagcggacacggagtcatgttgagtccgccctcacaacccttcggggat
gggtctttgtcccctagaacagacattattggtagtcctgacggatttatgcgcaacaac
ccatgtggcttccaagggaccagcagtcccagcgctacccacaccaacagccgcatccct
ttgtcttctcccggcatcatgatacacatctcgcctgctgcacagcagtcgtcctgcgtc
atggcgggaaggactaacatgcctctttcacccccggtccctaacaagagtcccgtaatg
aaaaagacgctgtgcaactactcggccagcttggactccagcagaactgcgtttcaccac
aaggcttcgcctgctcccgccccttccctgcctccaccctgtgccctgcaaaataaacag
gttagctctgagaaggaccctcttggcattctggatcccatccccagtaaaccaaacccc
ccaccccctttccagcccaacgctcaggtaccaatgatgaatgtaaacatccctcccgcc
attgtccccttgcctagcaaccttcccttacccacagtcaagccagggccagttggccat
ggcactcacctgcagaggactcagcatgtcacagcctcctccatctcttcgtcacccgtc
acttcccctgtgcacatgtccgggctggctttgggtcgcatggaagtgtctcctcagcga
tcccggtcctcgtccacctcctccgagcaagggagctttgctgttcccccttgcagtagc
atgaaggttccgccgcgctcacccaggtcctccatgaattctcctcgacccgctttgcct
tccagcccgtctggcaagccggatagtcttcaccagtacaaagagatgcccaatcagctg
ttgacaagcatgagcagctctatgagcggtcagcacaacctcatgtattccaccgcctca
ggcaacaacaccctgcagaaggagcacccagggcttttgggcatgcccctaaaccagatc
atcaaccaacacaatgctgcctcttttcccgccagcagtctcctgtcagctgctgccaaa
gcacagctagccaatcaaaacaaagtagggggaaatggcacgggaagtgcagctagtgcc
gggagcgccggaggggctgatgccggcaggactgttgaaggacacagtgctttaaatccc
atgttgccgcctaactctgccatgatgatgccgggtagcgaggggcagagtgggcgcgca
gccctgcgggacaagcttatggcgcagcagcgggacccactccgcaagcgtaagcttcct
ccaaacgctggcaaccatgagaacaactactttaacgtgctaaagacggacgtgggtggc
atgagggcaccctgcccttctgccgagcagatgagaaaaacatcccgactgcccccaacc
acctcaatggctcagttactccaatctctgagcaaccacagttctcacatggccagaggc
cgaaacccaggcctcgtaggtcccagtcgggcgcattttgtggagggtgtcgtgccctct
ggagcagtccatgcgagcatgcaggtccagcagcgaatgctcggccagacagaagcgatg
ctttgccctggtgttgaatctgttcccagccagtttccaggtgtgttgaaccagatgcag
gctacaacaatggggaactgtgggcctataaaccacagtggacaagttcctcttggaaat
cacgggatgggacacgtcagctctcattttcagcagcacagccagccaaacatcaactgc
atgatgcctagcagcactgatgcctgctgctcgcaacccattactgacacgggtaaccct
tcaccgctcatctgcagtattggtggcgctcctcagatgccaggcgtcatggctgccaca
gggcacttgtaccaacagcagatgcacccggcactacagggaatgcacggggtctccaca
tatcaaagtcaggggcatcccttcccatcaactccttttacagacagtactgctccccac
cccaacagcttgccatgcctgtaccaggactatccggggtgcatgtctgacagctcccag
cctgggatgacatctcattctggggccacggggatgtatcgagacggtgcgcagaagcta
cagggtgatgtttccatggcaggagccagtggagttcagagttcggtggatgcgatctac
agggcggtagtggatgcagctggcaaaggcatgcaagtgaccatcactgccggtgagagt
agcagcacacaggcgagcccagtccctgcgctcagtgccatgagtgccttcaccgcctcc
atcggacagccgctcagcctacctcatgccgtcaacgctgtcattcacgccccgcgcagt
tcggatggggccgactctataagccagcctcaccgcgctcgaccgcagctcaacaaacgc
acgcgcaggacctctgagcaagggaagaacacctctgacggcggagacacgcacgagtat
tttcgctcgcgtagtgctgccacacagatgagactgcagtgggatgagcccaaccaaact
cactggagaggggaagagtttctagagtgttctacccaggtacacaccggttcatgtggt
agcaaagtagaaagaacaagcctcatgaaaacgatgggacggactcgtgaccctgtcgac
tctcagatgggtgaaagtggaaatctgcgattaaacaactgcatcgtcggcagcgtaaga
gaacgtggcgagccccctcagctaaacggcacattgcctcgcaccacctacagggaaccg
ttcaccggagacgaccagtcacctggctcctcgaccagcttggagggaccattggtgaaa
gactacacccactttaatggacactttaacggacactgtgtgcccagcccctccgacaca
aagagtctgagcagtgaggaggaacttcgtcaccccgactcgccttcggccgaccttctg
cactacaggcccagggcttttaatgtgggcgaattggtctggccaataaaaggcttccct
ccttggcctaataagctgatgggagaagaacatgaacacaatcccagcatgcaactgtct
gaacaagcgaaggttgagccggagcagctaaaatgtctaacacaagaccttcaggcgctg
gacagagtcagcaggaaaaacagaaaggctggaaatctgaatcatcatttagaagctgcg
attcacgaggccatgagtgagttagacaagatgtctggaaacgttcatgcggatcgtcag
atcaaactgcccaaacccaagaggaggaaaatctccagataa
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