Triplophysa dalaica: 130424347
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Entry
130424347 CDS
T09616
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
tdw
Triplophysa dalaica
Pathway
tdw04136
Autophagy - other
tdw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130424347 (atg13)
04136 Autophagy - other
130424347 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130424347 (atg13)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130424347 (atg13)
Membrane trafficking [BR:
tdw04131
]
Autophagy
Autophagosome formation proteins
ULK complex
130424347 (atg13)
Atg1 complex
130424347 (atg13)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130424347 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
130424347
NCBI-ProteinID:
XP_056605907
LinkDB
All DBs
Position
1:16163546..16171840
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AA seq
536 aa
AA seq
DB search
MDSDLSSQDKKDLDKFIKFFALKTVQVIVQARLGEKISTCSSSSPTGSDWFNVAIKDIPE
VTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAISRVTPSYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGIVGTPI
GTITLSCAYRTNLALMSSRQYERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDDRG
PYAGIEDSQEVCTTSFSTSPPSQCLCNVSQAHFKTPKPALMATLRVPLMGLGISQQLYSS
RMSYQTPPLGTVDLCHPTACTAAAHPHQMVVPGKEGGVPQVPQQPNHGTAAEHGRIPSCP
SGQSPQPIPPTSCSNEVKSVSPSDVPETTFTRKVGAFVNKTTTQVTTTGLDLPFAAFAPR
AYDLEENDPMVHPPPSPAPSSPLQGSLHSNSSSHCGGQPQDDFVMVDFKPAFSKDDLLPM
DLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDAFVDTLQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatctgagctcacaagacaagaaagacttggataaattcatcaaatttttc
gccttgaagacagtgcaagtcatagttcaggcacgacttggggaaaagatcagcacttgc
tcatcttcatcacccacaggttcagactggtttaatgtggcaataaaggacatcccagag
gtgactcatgaagcaaaaaaagctctttctggacaactgcctggcattggccggtccatg
tgtgtggagatctcccttaaaacctctgagggggactccatggagctggagacatggtgt
ttggaaatgaatgaaaagtgtgataaggacattaaggtgtcgtatacagtttataatcga
ctgtctctgctgctcaaatctttactggccatctccagagtgacaccttcttacaagctt
tcacgtaaacaaggccatgattacgtcatactttacaggatttattttggagatgtgcag
ctgacaggtctcggggaagggttccagacagtgcgagtgggtattgtaggcactcccata
ggaaccatcactttgtcctgcgcgtaccgcacaaacctggccttaatgtcttcaaggcag
tatgagagaacaggccccattatgggcatcatcattgatcattttgtggagcgtcccttc
actaacatggcacacatgcatccctgcagctacagggcacctggtgaggacgacagaggg
ccctatgcaggaatagaagattcacaggaggtgtgcactacgtccttttccacctcccca
ccatcacagtgtttgtgcaatgtaagtcaggcacattttaagacacctaagccagctctg
atggccacgctgagggttcccctcatggggcttggcatctcacaacaactgtacagctct
cgtatgtcatatcagacaccccctttgggcactgtggatttgtgccaccctacagcttgt
actgctgctgcacatccacaccagatggttgtgcccggtaaagagggtggtgttccacag
gtaccgcaacagcctaatcatggcactgcagctgagcatggtcgtatcccatcatgccct
tctggacagtctccacaaccgatcccacccacatcctgtagcaatgaggtgaagagtgtg
tccccctccgatgttccagaaacaactttcaccaggaaagttggagcttttgtcaacaaa
accaccactcaggtgacaacaactggtttggatctcccttttgctgcatttgctccaaga
gcatatgacctggaggagaacgacccaatggtgcaccctcctccatctccagccccttca
tcgcctctacaaggcagtctgcactcaaatagctcaagccactgtggaggacagccacaa
gatgactttgtcatggttgactttaaaccagcgttctctaaggatgaccttttgccgatg
gacctgggcactttttatagagagtttcaaaatcctcctcaacttgcgagtctgtccatt
gatgtcagcgctcaatctatggcagaggacttggactctcttccagagaaactggccatt
tatgagaagaacattgatgagtttgacgcgtttgtggacaccctacaatag
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