KEGG   Triplophysa dalaica: 130424501
Entry
130424501         CDS       T09616                                 
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like isoform X1
  KO
K11757  protein polybromo-1
Organism
tdw  Triplophysa dalaica
Pathway
tdw03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130424501 (pbrm1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdw03021]
    130424501 (pbrm1l)
   03036 Chromosome and associated proteins [BR:tdw03036]
    130424501 (pbrm1l)
Transcription machinery [BR:tdw03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     130424501 (pbrm1l)
Chromosome and associated proteins [BR:tdw03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    130424501 (pbrm1l)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 Med3
Other DBs
NCBI-GeneID: 130424501
NCBI-ProteinID: XP_056606177
LinkDB
Position
6:21642109..21654682
AA seq 1646 aa
MGSKRRRATSPSSSASGGDFDDATSSTPVSGWKRRRASTAPSVDQIAICHELYNTVRDYK
DDQGRQICELFVRAPKRRNQPDYYEVVSQPIDMMKIQQKLRAEEYQDVEQFSADFHLLIN
NAKSYYKTDSAEYRAACRLLNVFQSIKNDLLQGGDGDEAEDDEEGEDGENPSTSMEDETP
PSYLKAILEQLLEAIVSCNDSSGRTVSELFQKLPSKLHYPDYYAVIKEPIDLRAVAQRIQ
AGHYKSINAMAKDVDLLTKNAKTYNEPGSQVFKDANTIKKVFAQRKAEIEQAEPTKSSLR
IRNRRSAQGDRLTAITMALQAGSESDEDSLLSGSVRYDAAETETDSGLSSGDPILLLYQA
VRGARSVSGQLLAEPFLQLPSRREYPDYYQQIKNPVSLQQIREKMKNGDYEGVEQMESDL
SLMFENAKRYNMPNSTVYKRAHRLQQIMQLKKKEIRDEDEGDVSTAVSEPGSGKKKSHKK
NTKKNRMKALYAAVTEAREVGTGRRLCDLFMVKPSKKDYPDYYKIIQEPLDMRTIEHNIR
TERYNNEDALMDDLKLMFRNARHYNEEGSQVYNDANILEKIVKDKQKDLGPAPEEDDMGS
PKLKLRRSGLAASPKKARTQTTPLQQKLTDLYEAVRNFTDNRGRRLSAVFLRLPSRSELP
DYYAAIKRPIDMERIRSYMVQGRYQDIDSLAEDFILMFNNACTYNEPESLIYRDALLLHR
AFLDARRRFEDEEEGEEGTLGAVAVGPLVRELIRNLFVSMMGHQDDEGRCYSDSLAEVPA
VDPADPEDPPLSLEIIRHNLDQGRYRRLDVFQEHVFEVLEKARRLNRTDSEIFEDSVELQ
QFFVKIRDELCKNGEILLSPALSYTSKHLHSDVDQEKREKLPQEMEEDQLKQEEDKKALP
DENKTEGHAGSQWSLDSQSTYSQDCSFENNTYSVGDCVYVQPTEANLRPHIVCIEKLWKD
EAGEQMLYGGWFYRPAETFHLATRKFLEKEVFKSDYYNRVPFSKIMGKCAVLFVKDYFKS
QPEGFKPEDVYVCESRYTARTKTFKKIKVWSIPPSSVKLVPRDVALPVVRVASMFMTTKR
DQDKLLDLPDGDGFIEKEREDVQVEVPNGEPGCQYYEQLRYNDMWLKVGDCVYIRSHRLV
RPRVGRIEKMWVRDEAAFFFGPIFIHPEETEHEPTKMFYKREVFLSNLEETCPMTCISGK
CVVLSFKDFLSCRPTEFADEDVLMFESRYIESEKQMKKFKGLKRFSLSAKVVDDEIFYFR
KPTVPLKEPSPLLNKKIEELEAKFADMEDLDEDMEDLDDDDEEAAATPSMPPSQTSVLND
IDMPYTPPQSTPKIKGMSKKEGAKRKINMSGYILFSSEVRSLIKARHPDYSFGELSRLVG
TEWRNLETTKKAEYEERAAKLVEHQERERVLQQQQQQASPRAGTPVGTMMGVVPPPSTMG
MLNQAMLPVPGMMGNYGSPYMPMQGPPEGMMGMGGTPPHHMGVPLLPSQHYLPPGMAGYP
GMPLPGVMNGMAGSPGPGNPYGMQMVGYGPGQQAPPPYPVQGQPGQHQPTSPIFVAPPPK
PQRLLHSEAYLKYIEGLSADSSTISKWDQSLKAQRKDCRLTREQESRLPTHWLKSKGAHT
TMADALWRLRDLMMRDTLNIRQAFNL
NT seq 4941 nt   +upstreamnt  +downstreamnt
atggggtccaaaagaaggcgggccacctctccctccagcagtgccagtggaggagacttt
gacgatgctacatcatccaccccggtcagtgggtggaagaggaggagagcatccactgcc
ccttctgttgatcagattgctatttgccatgaattgtacaacactgttagagattacaag
gatgaccagggcagacagatatgtgagctgtttgttcgggcaccaaaaaggaggaaccag
ccagactattatgaggtggtgagtcaacccatagacatgatgaagatacagcagaagctc
agggcagaggagtaccaggatgtagaacaattctcagccgactttcatctgcttattaac
aatgctaaatcgtactataagacagacagcgcagagtatagggcggcctgcaggcttttg
aatgtcttccaatccataaagaacgatctgctacaggggggtgatggagatgaggcagaa
gatgatgaggaaggagaagacggggagaacccaagcacttccatggaggatgagacacca
ccaagctatctgaaagccatattggaacagcttttggaggccattgtgtcatgcaatgat
tcttcaggaaggactgttagtgagctcttccagaaacttccctctaaattgcattaccca
gactactatgccgttataaaggaaccgatagatctccgcgccgtggctcagagaattcag
gcgggtcattacaaatctatcaatgccatggcgaaggacgttgatcttttgaccaaaaat
gccaaaacctacaacgagcccggttcacaggttttcaaggatgcaaacacaattaagaag
gtttttgcccagagaaaagcagagatcgagcaggctgaacccactaaatccagcctccgc
atcagaaatcggaggtctgctcaaggagatcggctcacggccatcaccatggcgcttcag
gcggggtctgaaagtgatgaggactccctgctttcaggctctgtgcgttatgatgctgca
gaaacggagacggactccggtctcagttcaggtgacccaatcctcctgctgtaccaggct
gtgcgtggagccagaagcgtttcggggcagcttcttgccgaaccgtttcttcagctcccc
tcacgcagggaatacccagactactaccaacagatcaaaaaccctgtctccctacagcag
atcagggaaaagatgaagaatggggattatgagggagttgagcagatggagagtgacctc
tcgctcatgtttgagaacgcaaaacgctacaacatgcccaactccaccgtatacaaacgt
gcacatagactgcagcagataatgcagctgaagaaaaaggagattcgggatgaggatgaa
ggagatgtttctactgcagtgtctgaaccaggaagtggtaaaaaaaaaagccataagaaa
aacaccaaaaagaaccgaatgaaggcgttgtatgctgcagtgactgaggcaagagaagtc
ggcaccgggcgacgcctctgtgatctctttatggtaaagccctccaagaaagattatcca
gactactacaaaatcatccaagagccactggacatgcgcaccatcgagcacaacatccgc
acggagcgttataacaacgaggatgcgctcatggatgacttgaagcttatgtttcgcaac
gcccgccattataacgaggaggggtctcaggtttacaatgatgcaaacatcttggaaaag
attgttaaggataaacaaaaggatcttggacctgctccggaggaggatgacatgggctcc
cctaaactgaagcttcgtcgtagtggacttgcagcctccccgaaaaaggcccgcacacag
accacaccgcttcagcaaaagctcactgatctctacgaagctgttcgcaactttacagac
aaccgcgggcgtcgtctcagtgccgtttttctacgcctaccatcacgctctgagctgcct
gactattatgccgccatcaaacggcccatcgacatggagcggatacgcagctacatggta
cagggtcgctaccaagacatcgattctctggcggaagatttcatcctcatgttcaacaat
gcttgcacctacaacgagccagagtctctcatataccgcgatgctttgttgctccatcga
gcttttctagatgcccgtcgacgctttgaggatgaagaggaaggagaagaaggcacgctg
ggcgccgtggcagtcggtcctcttgtgcgtgagctcattcgtaatctctttgtttcgatg
atggggcaccaggatgatgaggggcggtgctacagcgactccttggcggaggtgccggcc
gtggaccctgctgacccagaggaccctccactcagtttagagattattcgccataacctg
gatcaaggacgctaccggagactggatgtgtttcaggagcatgtgtttgaggtgctggag
aaagctagacgcctcaataggactgattctgagatctttgaggattcggtggagcttcag
cagttctttgtgaagattcgtgatgagctgtgcaagaatggtgaaatcttactcagtcca
gcactgagctacacatccaaacatctgcattcagatgtggaccaggagaagcgagagaaa
ctaccccaggagatggaagaagaccaactgaaacaagaggaggataagaaagctcttccg
gatgagaacaaaacagagggacacgcaggaagccagtggtcattggattctcaaagcaca
tacagtcaggactgcagttttgagaacaacacctacagtgtgggagactgtgtatatgtg
cagcctactgaagcaaatttgcgacctcacatcgtgtgtattgagaaactatggaaggac
gaagccggtgagcagatgttgtatggtggctggttttatcgcccagcggagacgttccac
ctcgccacacgtaaattcctggagaaggaggtgtttaagagcgactactataaccgcgtg
cccttcagcaagatcatggggaaatgtgctgtgttgtttgtaaaggattattttaagtcg
caaccagaaggattcaaaccagaagatgtttacgtctgtgagtctcggtacactgccagg
accaaaacctttaagaagatcaaggtgtggtccataccaccaagctctgtgaaactagtc
cctcgagatgttgcgttacccgtggtcagggtggcctccatgttcatgaccactaaacgt
gatcaagacaaattgttggaccttcctgatggagacggttttattgagaaagaacgagaa
gacgtccaagtcgaagtacccaatggggagccgggttgtcagtactatgagcagcttcgc
tacaacgatatgtggctcaaagtgggcgactgtgtctatatacgctcccacaggctagtt
cgccctcgagttggcaggatcgagaagatgtgggtgcgagatgaagcagcgttcttcttc
ggacccatcttcatccaccctgaggagactgaacatgagccaacaaagatgttctacaag
cgtgaagtgttcctcagcaatctggaggaaacctgccctatgacatgtatttcagggaaa
tgcgtggtgttgtctttcaaggatttcctgtcctgcagacccactgagtttgcagacgaa
gatgtgctcatgtttgagagtcgctacattgagagcgaaaagcagatgaagaagtttaaa
ggccttaaacgtttctcactttctgctaaagtggtagatgatgagatcttctacttcaga
aagccaactgtgcctctaaaggagccgtctccccttctgaataaaaagattgaggaactt
gaggccaagtttgcagacatggaggacctagatgaagatatggaagatctggatgatgat
gatgaagaggcagcagcgacgccctcaatgcctccgagtcaaacatctgtattaaatgac
atagatatgccttatacaccaccacagtccacaccaaagataaagggcatgtccaagaaa
gaaggagccaagcgtaagatcaatatgagtggctacatcctgttcagcagtgaggtcagg
tctcttattaaagcccgtcaccccgattactccttcggagagctgagccgactagtgggc
acagaatggaggaacctggaaactactaagaaggcagaatatgaagaacgagctgcaaaa
ctggtggagcatcaagaacgagagagggtccttcagcaacagcagcagcaggcttcccca
agagcaggtactccagtcggcacaatgatgggggtggtacctcccccaagcactatgggg
atgctaaaccaggccatgctacctgtgccaggcatgatgggaaattatggctcgccctac
atgcccatgcagggtcctcctgagggcatgatgggcatgggtggcacaccacctcatcac
atgggggtgcccctcctgccctcccagcactaccttccaccaggcatggccgggtaccct
ggtatgccccttccgggtgtgatgaatggtatggctggaagtcctggtcctggaaaccct
tatggcatgcagatggtgggttatgggcctggacaacaggctccgcctccatatccagtc
caaggtcaaccaggccagcatcagccaacctctcctatttttgttgccccgcctccaaaa
cctcagcgtctgctgcattctgaagcttacctgaaatatatagagggcctcagcgctgat
tcatccactattagcaagtgggaccagagccttaaggcacaaagaaaagactgtcggctc
acccgcgaacaagagagccgtctccctacgcactggctgaagagcaagggtgctcatacc
acgatggcagatgcgttgtggagactccgagacctgatgatgagggacactctcaacatc
cgacaggccttcaacctttaa

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