Triplophysa dalaica: 130424528
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Entry
130424528 CDS
T09616
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130424528 (chl1b)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
L1 family
130424528 (chl1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Ig_5
C2-set_2
Pur_ac_phosph_N
C2-set_3
Ig_PDGFR_d4
Izumo-Ig
Ig_C17orf99
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
130424528
NCBI-ProteinID:
XP_056606246
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Position
6:21067673..21146535
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AA seq
1203 aa
AA seq
DB search
MRLLWKIGVTLFLGACLNIICRYQANALDIPLDVLERINMEQLPTITEFSPGSLIAFAFE
ESFPVKCEAKGNPVPQFRWTKNDQDFDPYQDPRLVTLEDSGTFIIPNDGNLTEFQGIYRC
FATNKLGTAMSEEIEFIVPNVPKFPKEIIDPIEVMEGQSVILECNPPKGLPPLQIYWMTI
GLQQIEQDERVSVGLNGNLYFSNAIETDSRRDYCCFASFRRMGTVVQKPAMSVNVKSNKL
MKGSGSGSGTGYANSLLERKPSLLTPTGKESHVYLVKGEELQLECIADGFPTPKVEWVRM
GHKLPEKAVVESHGKLLTKEMVNEEDEGKYMCKAKNLHGEAVHYFHVTVEEPPEWEIMPQ
SQLVTIGAEVEIKCVVKGNPQPSVTWRVNSLPLNEVPVSNRKIMKDGTISIHNASPDNSA
VYQCEATNRHGTILANANIMIMNIQPVILTEDNLPYMAVEGKGIIMHCKVFSSPTSSITW
SQADSANAVEGERFLVHKNGSLEIHHVTKEDMGEYSCFAQNTEGKVAISSTLEVKDPTRI
VDPPQDLRVSAGTTIQFSCQATFDSSFGSDFEILWEKDGVALNSSVDTRYVLDDGVLEII
NVSFGDQGLYMCVARTPVDQDTAVAQLSVVDVPDPPENVILSEHNGRSVKLLWISGDDHN
SSITEFVIEFEESQFEPGSWKELKRVPGNHQSAILKLQGHVDYRFRVSAINEVGRSRRSQ
ATERYKTPSSAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPNLEYKVSYRRQGTEDW
VEHVIKRHSFVVKNTPTFVLYEIKIQAKNHAGWGPDPKIITAYSAEDFPSAAPEDISAEL
MNNTVVKVRWAHVHKDKLHGHLGGYRVSWWRLRSLLDSKKTHGDKHTLTFSEERTHAVVT
GLRPFSEYSLIVMAFNGRGNGPGSHPVSFKTLEGVPGQVVSFRATNIQKHKVILTWSPPI
DANGVLIGYILQYQLINDTEEVGPLMTLNISADSNKLHLQDLEALSRYKFYLRSCTRVGC
GPAVSEECTTVPEATSTDVASFNIRKSGPQLPSRKTTVSPVANATLSSIGLASIHGGISN
QGWFIGLMCAIALLTLIVLIACFVNRNKGGKYSVKEKEDLHPDLESPGINDDTFCEYSDN
DEKPLKGSQHSLNGNLKADSGDSMVDYGEEDAHFNEDGSFIGEYSGCKERVSMEIKGNNQ
STA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgttatggaaaataggagtgaccctctttttgggtgcttgtcttaatattatc
tgcaggtatcaagctaatgccctggatattcctcttgatgtcttagaacgcataaacatg
gaacagctgcccacaattacggagttctctcctggatctctgatcgccttcgctttcgaa
gagagcttccccgtgaagtgtgaggcgaagggaaatcctgtaccacagttcaggtggaca
aaaaacgaccaggactttgatccttatcaggatccaagattggtaacgctagaggactcc
ggaacattcatcattccgaatgatgggaatcttacagaattccagggaatttatcgttgc
ttcgccactaacaagttaggcacagccatgtcagaggagattgaatttattgttcccaat
gttccaaagtttcctaaagagatcattgaccctattgaggttatggaaggtcagtcagtt
attctggaatgcaacccaccaaaaggactcccccctctgcaaatctactggatgacaata
ggtttgcagcaaattgaacaggacgagagagtttcagtgggtctgaatgggaacctgtac
ttttcaaatgccatcgagactgacagccgcagggactactgctgctttgcctcctttaga
cgcatgggaaccgtcgtccagaaacctgccatgtccgtcaatgttaaaagcaataagtta
atgaagggctcaggttctggtagcggcacaggttatgcgaactctcttttggagaggaag
cccagtctgttgacgcctacaggaaaggagtcacacgtatatttagtgaaaggagaagaa
cttcagctggagtgtattgcagatggatttccaactccaaaggtagagtgggttagaatg
ggccacaagctgccagagaaggccgtggtggaaagtcatgggaagttgctcactaaagag
atggtgaatgaagaagatgaaggaaaatatatgtgcaaagccaaaaatcttcatggagag
gctgtgcattattttcatgtgacagtagaggagccacccgagtgggagataatgccacag
agtcagctggtgacaattggagctgaagtggagatcaagtgtgtggtcaaaggaaatcca
cagccaagtgttacatggcgggtcaacagccttcctctcaatgaggtcccagtttccaac
agaaagatcatgaaagacggcaccatttccatccacaacgcaagcccagacaacagcgcg
gtttaccagtgcgaggccacaaaccgacatggcaccattctagctaatgccaacattatg
attatgaacatacagccggtgatcttaacagaagacaatcttccgtacatggctgtggag
ggaaaaggcatcatcatgcactgcaaggtcttcagctcgcccacctccagcattacgtgg
agtcaagctgacagcgccaacgcagtggaaggagaaagattcttggttcataagaacggt
tcgctggagatccatcacgtgacgaaagaggacatgggagagtactcatgttttgctcaa
aatactgagggaaaagttgccatttcttcgacccttgaggtcaaagatcctaccagaata
gtagaccccccacaggatttgcgggtttcggctggaaccaccatccagttttcgtgccag
gcgacgtttgattcttccttcggtagcgactttgagattctctgggaaaaagacggtgta
gccctcaacagtagcgtggacacacgatatgtcctggacgatggagtgctcgagattatc
aatgtgagctttggagaccagggcttatatatgtgtgtggccagaacaccggtcgaccaa
gacacggctgtagcacagctctcagttgtggatgttcctgatccaccagaaaatgtgata
ctatctgaacacaatggcagaagtgtgaaactactctggatttcaggagacgatcataac
agctccatcactgagttcgtcattgagtttgaggagagtcagttcgagcctggaagctgg
aaggagctgaagagggtacccggaaaccatcagtcggccattctgaagcttcaaggacac
gtggactaccgcttccgagtctccgccatcaacgaggtcggaagaagtcgcaggagccag
gccaccgaaagatacaaaactccttcatcagcacctgacaagaaccctgaaaatatcaag
atcgaaggtcatttgccacacgaaatggatatcaactgggagccattgtcacccatcgaa
cacaacggaccgaatttggagtataaagttagctaccgaagacaaggaaccgaagactgg
gtggaacacgtcataaagaggcattcgtttgttgttaaaaacaccccaacgttcgtcctt
tacgagatcaaaattcaggccaagaaccacgccggttggggcccggaccccaaaataata
accgcgtactctgcagaggatttcccctcagcagctccagaggacataagcgcggagttg
atgaacaacaccgtggtgaaggtcagatgggcccacgttcacaaggacaaactccatgga
catctggggggctatagggtgagctggtggaggctgcgcagccttttggactcgaagaaa
acacacggtgacaaacatacgctgacattttctgaagagaggacccatgcggtggtaaca
ggtctaaggccgttctctgaatacagcctcatcgtcatggcctttaacggcagaggaaac
ggacctggaagtcacccggtcagtttcaaaactctagagggagttcccggtcaagtggtt
tctttcagagctacaaacatccaaaaacacaaggtgatcttgacctggtctcctcccatt
gacgcaaatggagttcttattggctacatcctccaatatcagctaataaacgacacggag
gaagttggtcctttgatgaccctgaacatctctgcagacagcaataagttgcacctccag
gacttggaagcgctgagcagatacaagttctatctgcggagctgcacgagggtgggctgc
ggcccggcggtcagcgaagagtgcaccacagtccccgaagcgacttcaacagatgtggcc
tctttcaacatcagaaaatccggcccgcagttaccttcaagaaaaactaccgtttctcct
gtggctaatgcaactctttcctccataggtttggccagtattcacgggggcatctccaac
cagggctggttcatcggactcatgtgcgccatagcactgctcaccctcatcgttctcata
gcctgcttcgtaaaccgaaacaaaggaggaaaatactcagtgaaagagaaagaggatcta
cacccagatctggagtccccaggcataaacgacgacaccttttgcgaatacagcgacaat
gatgagaaaccactgaaaggcagccagcattccctcaatggcaacttgaaagcagacagc
ggagatagtatggtggactacggcgaagaggacgctcactttaatgaggacggctccttt
attggcgaatactccggatgcaaggaaagggtctccatggaaatcaaaggaaacaatcag
agcacggcgtaa
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