Triplophysa dalaica: 130424542
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Entry
130424542 CDS
T09616
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00450
Selenocompound metabolism
tdw00970
Aminoacyl-tRNA biosynthesis
tdw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130424542 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130424542 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tdw01007
]
130424542 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130424542 (mars1)
Enzymes [BR:
tdw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
130424542 (mars1)
Amino acid related enzymes [BR:
tdw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130424542 (mars1)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130424542 (mars1)
Prokaryotic type
Other AARSs
130424542 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_2
DUF6907
GST_C_3
Arc1p_N_like
Anticodon_1
GST_C_7
GST_C
PMI_typeI_C
Motif
Other DBs
NCBI-GeneID:
130424542
NCBI-ProteinID:
XP_056606284
LinkDB
All DBs
Position
6:24613737..24624276
Genome browser
AA seq
915 aa
AA seq
DB search
MKLFVGEGNPHSVKVLAVLELTGVKCDVQLVNNEERVVPYLTRPVLPVLLLPSGQHLFSP
NTICQYLFDVSGRKATDATNQWMEWEITDLQPAVLQALHMMALQGKRSEAAAVMKEPLSH
LEQNLRKSSTQFLTSDAITIADIVLWAALYPILSDSSFEAGDLRFVRGWFDGVDVQSACQ
TAAQKVLHGKSSEALKTFLQKHPATQTQRRDCPTNTSAAEAEDTERVMSELEIEEAAQMW
STGLKYSHAVPQRNHPILPQEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADVFARYGRL
RGWNLLYVCGTDEYGTATENKAREEGLTPREICDKYYAIHASIYKWFQIDFDFFGRTTTD
RQTEIAQDIFWRLHERGFLLEETVEQLRCESCQRFLADRFVEGVCPHCCYPEARGDQCDK
CGRLINAVDLRNPQCKVCKQTPVIRSSKHLFLDLPKLEGELEKWLDQSMGAGDWTTNARQ
ITRSWLRDGLKPRCITRDLKWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWEKWW
KNPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTIVNNLIATEYLNYEDTKFSKSRGV
GVFGDMAKDTGIPSDVWRFYLLYVRPEAQDSAFSWSDMALKNNSELLNNLGNFINRAAMF
VTKFFEGRVPEMLLNDDDKRLIAMVSWELKQYIQLLDKVRIRDALKCILNISRHGNQYIQ
LNEPWKKIKGGDMDKQRASTVTGVSVNVACLLSALLEPYMPTVSQTIRTQLQAPPNCTGA
MIQGAGTFICTLPAGHRIGTVSPLFQKLENEQIEGFRKQFGGQQTQIPSTASADTKLCAG
VELNSTVNVKADPERARRLAEQVTEQADKVRALKAQKAEKSVIGEEVAKLLELKKQLALA
EGKNQEPSNHKAKKK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtttgtcggcgaggggaatccgcactccgttaaagttctggctgtgctggaa
cttactggagtaaaatgtgacgtgcaactggttaacaacgaggagagagtggtgccatac
ctcactcgcccggtgttacccgtccttctgttacccagcggtcagcatctcttcagccca
aacaccatctgccaatacctgttcgatgtgagtggtcggaaagcaactgatgccactaac
cagtggatggaatgggaaatcacagatttacagcctgcagtgttacaggccctccacatg
atggcactgcaggggaagcgttctgaagcggcggctgtgatgaaagagcccctcagtcac
ctggaacagaacctgaggaaatcatccacacagttcttaacctctgatgcaataacaatt
gcagatattgtcctgtgggcggcgctctaccccattttatccgactcgagttttgaagcc
ggtgacttgcggtttgtgcgaggttggtttgatggtgttgacgttcagtctgcgtgtcag
acggctgctcagaaggttctgcatggaaagagttccgaagccttaaagacatttctacag
aaacacccagcaacacaaacacagcggcgagactgcccgaccaacaccagcgctgcagag
gctgaggacacagaacgtgtgatgtcagagctggagattgaagaagcggctcagatgtgg
tcgacaggtctcaaatattctcatgcagtgccgcagaggaatcaccccattctcccacag
gaaggaaggagaaacgtgctagtcacgagtgcgcttccctacgtcaacaatgtgccacac
ctgggcaacatcatcggctgtgtgctgagtgcagatgtgttcgccagatacggccgtttg
agaggctggaatctgttgtacgtctgcggtacagatgagtatggaacggcgactgaaaac
aaggctcgtgaggagggtctgacaccgagagagatctgcgataaatattacgccatccac
gcctccatctacaagtggttccagatcgacttcgactttttcggtcgcaccaccaccgac
cggcagacggaaatcgctcaggatattttctggcgtctgcatgaaaggggttttctcttg
gaggaaacggtcgaacagctgcgatgtgagagctgtcagcgctttttggccgatcgcttt
gtggagggcgtgtgtcctcactgctgttacccagaagcccgcggggaccagtgtgacaaa
tgtggccgtctcatcaatgctgtggacctcaggaatcctcagtgcaaggtgtgcaagcaa
actccggtgatcaggtcctctaaacacttgttcctcgacctgccaaagctggagggcgag
ttggagaagtggttggaccagtcgatgggggctggtgattggacgacaaacgcgcggcag
atcactcgctcgtggctgcgggacggcctgaagccgcgctgcatcacccgagacctgaag
tgggggacgcctgtaccgcaccccgattacaaggagaaagtgttctacgtgtggtttgat
gctcctattggctatctctccatcacggcaaactacaccgaccaatgggagaagtggtgg
aagaatcctcagcaggtggagctgtacaacttcatggcgaaggacaacgttcccttccac
agcgtggtgttcccatgttcacttctgggtgctcaagacaactacacaattgtgaataat
ctcattgccacagaatatctgaattatgaggacaccaagttttctaagagccgtggtgtg
ggtgtgttcggagacatggccaaagacacaggaatcccgtcggacgtttggcgcttttat
ttgctgtacgtgcgtcctgaagcgcaggactctgccttctcctggtctgacatggcactc
aagaacaactccgaacttctcaacaacctgggaaacttcattaacagggcagcgatgttt
gtgactaagttctttgaaggacgcgttcccgagatgctcctcaatgatgatgataaacgt
ctcatcgctatggtcagctgggagctcaagcagtacatacaactgctggataaagtcagg
atccgtgacgctctgaagtgcatcctgaacatctcgcgtcacggcaaccagtacatccag
ctcaatgaaccctggaagaagatcaaaggaggagacatggacaaacagcgggccagtacg
gtgacgggcgtatcggttaacgtggcatgtctcctctctgccctgctggagccctacatg
cccaccgtgagtcagaccatcagaacgcagctgcaggctccgcccaactgcaccggagcc
atgatccaaggggcgggaactttcatatgtacactaccagccggccaccgcatcggcacg
gtcagtcctttgttccaaaagttggagaacgagcagattgagggtttcagaaagcaattc
ggaggacaacagactcagattcccagcacggcttcagccgacaccaaactctgcgccggt
gttgagctcaactccacagtgaatgttaaagcagatccagagagagccagacggctggcc
gagcaagtgacagagcaggctgataaagtacgagctctgaaggctcagaaagcggagaaa
tctgtaatcggagaggaagtcgccaaattactggagctaaaaaaacaactcgctcttgca
gagggcaagaaccaggagccgtccaatcataaagcaaagaaaaagtga
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