Triplophysa dalaica: 130424858
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Entry
130424858 CDS
T09616
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130424858 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Cadherin related
130424858 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Ig_Shg
Cadherin_pro
Cadherin_4
EGF
hEGF
Y_Y_Y
EGF_2
Laminin_G_3
He_PIG
Big_9
Antig_Caf1
cEGF
Motif
Other DBs
NCBI-GeneID:
130424858
NCBI-ProteinID:
XP_056606802
LinkDB
All DBs
Position
1:11799263..12003175
Genome browser
AA seq
2903 aa
AA seq
DB search
MIWTILLPYCAAFVLGNKTDERIPFFHGHVFENSPPGSKVNGLSIPVKRVDPQRWCSESG
MHLKLQGDRSEDFHVFAHHRRGHILLKTSNVLDREERSEYYLSLALCCQSCASAERVVAE
VASIKVDVLDTNDHEPTFRHSDVKITLDDATALRSVVYTVKAEDVDSGKNADLIYYALPK
NGSFYVVPKTGDVLLVDSILGLAQPIKFSVFARDHGWPSRTSHNMDVEISPRQWPALSQL
DNGLSRKSRSVMEPDKPIKVTVSEDASIGSVIMNLHPVRFPSASFELILPDADNSPVTVS
RDSGDLVISRRLDRETRPLVEITVKVQDKRGSEWYTVRVELTVMDVNDNAPEWTMVPFPY
LSVVTASAPPNTLVYKLQARDSDEGVNGEVEYFLSDGGDGRFEVDRKNGHVRTTGLPLQR
DREYLLTVVAADRQGSRGPPAIVSVVAGPRAPQFTNVSYTISIPENTPEGQPFIVTPAMS
FQKLPIMYSLLINPSSLFSIHQETGEISLTRSVDYESDQHRYLLLVRASENQDSLSSAAE
VRVIITDENDCVPEFLQSIYSKDGVPETVTTATSLLQVSASDCDSEQNADITYYTLNPDF
IISAHGTIFPAGPLDYERLNHLYEFIVMAVDKGEVPRTGTATVRLRMANVNDEPPEFSQP
VYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITAGNEEGNFVIDSQKGLIRLRSSPPPK
LQGMKYILNVTATDDNASGGPQCLSATAQIIVGVNDVNNNKPLFEKCLEYKERASVLENK
PAGTFVLQVHAEDADEGANGRVTYGFMHKDSTVPAFSIDPATGVIVTTIKFDRERQREFA
VTVTATDQAADPLIGICQLNIQILDENDNSPKFENLRYEYFLREDTKIGTSFLRVAAHDD
DYSTNAAITYSVSGEQPEYLRVNPLTGWVYVNQPISQRTYISRQIIATDGGNRSSLVELA
VTITNVKNQPPQWEKDKYEVVIPENTVRDTPVVTIKATSPLGDPRVTYNLEDGLVPESNM
PVRFYLTPNREDGSASILVAEPLDYEITRNFMLRVRAQNVAPVPLAAFTTVHINITDVND
NVPFFTSSIYEASVTEGAEIGTHVLQVSANDLDLGMNGKISYSLLNDRSGDYQYFGIDPE
LGTLYTEAVFDRETKGSYLLEVKSVDSWESARPGKHGQPNSDTAYVRIFISDVNDNKPVF
SQSVYEVDVDEDADVGSTILTVSANDEDEGANAKLRYQITSGNVGGIFDMEPEVGTIFIV
QPLDYEQHKLYKLHVLASDGKWEDYSSVIVTVVNKNDEAPVFSVNEYYGSVTEELDGSPV
FVLQVTASDPDKDADQEALRYSLHGQGAESEFIIDEVTGKIYAQRTLDREGRAVWRFVVL
ATDEGGEGLTGFTDVIINVWDINDNAPIFACAPDSCHGDVSENSQPGTPVMEMTATDLDD
AAVGQNAVLAYRIVGNAALNGGNSGADVFSINPATGTVLVAMSGLDREQTDTYILVVEAR
DGGGMIGTATATIHVTDVNDHVPRFFDRSCSVRIPESSEPNSVVIELSAEDADAGENGQL
TFSVVAGDPEQKFYMVSHRQDQRGTLRLKKRLDYERPGEQRFNLTIKVEDMEYSSLLHCT
VEIEDCNDHAPVFIPHFLQIPALREDVAPGTSLASLVASDLDSGLNREITYSIAQESDPY
HLFSVEQSGLVSVTSELDREKVAQHHLVILATDHGVPPLTGTATIQMALLDVNDNGPEFE
AVYAPVVWENVMGPQVVRLNQSSMLLRAVDRDSEENGSPFSFSVPLEYRYSNDFHLQDNG
NDTATITALRAFDREGQKEFLLPIIMTDSGIPPKTVTNTLTITIGDENDHAHTAGQKKVF
INCHRGRMPTNVLGKVYSPDPDDWDNKTYAFEGHAPNYFILNKRTGFLIIKENTPPGSYD
FQVQVSDGMWPDAISSVKVNVRDLRDDAIYNSASLRIADVSATEFMERRGNLKSRYELLG
DFLSDMLSVGAEDVNIFSLVEVRERTLDVRFTVHSAPLLRAEKVHGYLAAHKQKLQSFLQ
VNVTQVHVDECVDFDCRGGGGCTSHLSVTDKPAVVDSGSMALVSVTVEAAAVCICSAREH
YHQGCSVYPRNPCHNGGICVDTQSGYRCQCPAQFEGPECQQTKHSFHGNGYAWFPPIRPC
FESHLSLEFITEVADGLLLYSGPVSQLQPWEPEDFMAIELIDGTPTLKINHGSGTLVLQL
PGNVNVADRRWHRLDVRSNSKEVRFTLDRCAAATIMEMEGVGSWLTTEDHTSCEVTGVTP
NMDRHLNVTQVLQLGGVNENLPYIYPQLQHKHFTGCIRNLIVDSKFYDLGSPADSFGSTP
GCLMTDSSCVNMGFPSCGTRGRCHGEWGSFSCQCIPGYSGHQCEKEVPEYSFDGRSHVHF
QLAFTLPARHTQVQVLLRTRKHSSSILTLLSKEQNEYIKLEIYQGLLNVFYNLGDGDFNL
TMPSYRVDNGEWHDVHLDRHDNELTLRVDGGGGRREVTGSPGRSREIVIDPALVMLGNSF
PSGHNKSFQGCMRDLRLSGRFIPLDGQPREGVSVVSSQGVSLGCSSDSCRKNQCSPPFTC
VDLWRIHECRCPSGHMVKANSTGKFCVYTLCASRPCHRGTCVAQSPSKFTCHCPEGYRGR
HCEVTLAIYRDDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSAHH
DGWEDIRENVLNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVHYSRSRAIHHHPPSQQQ
QHFCQPDPPSRVGTGNTASSSISSSTTTVRRDVPPSRSPAQGQTANTSRAAQLARKSLSF
SSQDLARYLCEIIRDADQHPETAPFDSLQVFSTEGGGSLAGSLSSFSSAGLEEGTAGHEC
LKEWGPRFEKLKALYERAEGSDL
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgatttggactattttgttaccatattgtgctgcttttgtgttgggaaacaagaccgac
gaacgaatacctttctttcacgggcatgtgtttgaaaactctccaccgggctccaaagtg
aacgggctgagtatcccggtgaagcgcgtcgacccgcagagatggtgctcggagtccggc
atgcacctgaaactccagggagaccggagcgaagattttcacgtcttcgcccaccaccga
cgtggacacatattactaaagacctcaaacgtgctggatagagaggagcgctctgagtat
tacctcagcctggcgctttgctgtcagagctgcgcctcagccgagcgcgtcgttgccgaa
gttgcttctattaaagtggacgtgctcgacacgaacgaccacgagcccactttccgccac
tcagacgtgaaaataactttagacgacgccacggccctgaggtcggtggtgtacacggta
aaagcagaggatgtcgacagcggcaaaaacgccgacctaatatattacgcgctgccgaaa
aacggcagtttttatgtggtgcccaaaaccggcgacgttctcctcgtggactcgatactc
ggtctcgcgcagcccataaagttcagcgtgtttgcgcgagaccacggctggccctctcga
accagtcacaatatggatgtagagataagtccgcgccaatggccggctctttcccagctc
gataacggactctcgagaaagtcccgttccgtgatggaacctgacaaacccattaaagtc
acggtgtccgaagacgcgagtatcggctcggttataatgaatctacacccggtgaggttt
ccgtccgccagctttgagctgatactaccggacgcggataactctccagtcacagtgagt
cgggacagcggagatttggtcatatcgaggcggctcgaccgagagacgcggccgttagtg
gagataactgtaaaagtgcaggataagcgaggttcagaatggtatacagtgcgagtggaa
ctgacggtgatggatgtaaatgataacgccccagaatggacaatggtacccttcccttat
ctaagtgtggtaactgctagtgctccgcccaacactctggtttataaacttcaagccaga
gacagtgatgagggcgtcaatggggaggtggagtacttcctgtctgatggaggcgatggg
aggtttgaggtggacaggaaaaacggccatgtgcggaccacaggtctacccctgcagaga
gacagagaatacctgctaaccgtggtggccgccgaccgtcagggcagccgcggtcctcct
gccatagtgtctgttgttgcgggtccaagagctcctcagttcacaaacgtgtcttataca
atttctataccagagaacacgccagaaggacagcctttcatagtcactccagcaatgtcc
tttcaaaagctgccaataatgtacagcctgctcatcaatcccagcagtcttttcagcatc
catcaggagacaggggagatcagtctgacacgcagtgtagactatgaaagcgatcagcac
cgttatctgctgctggtgagggccagtgagaaccaggacagtctcagcagtgctgccgag
gtgcgagtaatcatcacagacgagaatgactgtgtcccagaattcctgcagtcaatttac
agtaaggatggtgtacctgagacggtcaccacagcaacgtcactcctgcaagtttcagcc
agtgattgtgattcggaacagaacgccgatatcacgtactacactctaaatccagatttc
attatttcggcccatggcactatatttccagcaggccctttggattacgagagactgaac
catctgtatgagtttatagtgatggcagtggataagggcgaggtgccccgcaccggtaca
gccaccgtacgtctccgtatggccaatgtcaacgatgagcctccggagttctcgcagcct
gtgtatcggacctttgtctcagaggacgcagggcccaacacactagtcgcaacagtgctt
gccaaggacccggatggagatgggatcacatacaaaattactgcaggcaatgaggagggc
aactttgtcatcgacagtcagaaaggactgatccgtctgcgctccagtccacctcccaaa
cttcaaggaatgaagtacattctgaacgtaacagcaacggatgacaacgcctccggtgga
ccgcagtgcctctctgccactgcccagatcattgttggagtaaatgatgtaaacaacaac
aaaccattgtttgaaaagtgtctcgagtataaggaaagagcctcagtgcttgaaaataaa
ccagctggaacgtttgtgctgcaagttcatgcagaagatgctgatgaaggggccaatgga
agagtaacgtatggcttcatgcataaagatagcactgttcctgccttcagcattgatcct
gcaacaggtgttatcgtaaccacaatcaagtttgatcgcgagaggcagagagagttcgca
gtaacagtgacggctacagaccaagcggcagatcccctcataggcatctgccaactcaac
atccaaatcttggatgagaacgacaacagccccaaatttgagaacctgcgctacgagtat
ttcctgcgagaggatacaaagatcggtaccagttttctgcgcgtggctgcgcacgacgat
gattacagcactaatgcagccatcacttactccgtgtctggagaacagccagagtacctg
cgagtaaatcccctcacaggctgggtctacgtcaaccaacccatctcgcagaggacctac
atcagtagacagatcatagctacagacggtggaaaccgtagtagtttagttgaactggct
gtcactatcaccaacgtaaagaaccagccgccgcagtgggagaaggacaaatacgaggtg
gtcatacctgaaaacactgtcagagacactccagttgtgactatcaaggccacttctcca
ctgggtgacccaagggtgacatataatctggaggatggattggttccagagagcaacatg
cctgttcgtttctatctaacgccaaatcgtgaagatggctccgcctctatccttgttgca
gaacctctggattatgaaatcacccgcaactttatgcttagggttcgagcgcagaacgtg
gcacctgtaccacttgcagccttcaccactgttcacattaacatcacagatgtcaatgac
aacgtgccattcttcacctcttctatatacgaggcatctgtgacagaaggagcggagatt
ggaactcatgttcttcaggtgtcagccaatgatcttgacctggggatgaatgggaagatc
tcatactcgctactgaatgaccgcagtggagactatcagtactttggcattgatcctgag
ctgggcaccctctacacagaggctgtgtttgatcgcgagaccaaggggtcttacctgctg
gaggtgaagtcagtggatagctgggagtctgcaaggccggggaagcacgggcaacccaat
tcagatacggcgtacgtgcgcattttcatcagtgacgtgaacgataacaagccggtgttt
tcgcagtccgtgtatgaagtagatgtggacgaggatgctgacgtgggttccaccatcctc
actgtcagcgctaatgatgaagatgaaggtgccaatgccaagttgcgctatcagattaca
tcaggtaacgtgggaggtatttttgacatggagcctgaggtgggaaccatttttatcgta
cagccactggattacgaacagcacaagctttataaactgcacgttttggcctctgatggg
aagtgggaagattactccagtgttatagtcaccgttgtgaataagaatgatgaggcacct
gtgttctctgtgaacgagtactatggcagcgtgactgaggagctggacggttctcctgtg
tttgtgctacaggtcactgcctccgacccagacaaggatgctgaccaggaggctttgagg
tactctttgcatggtcaaggtgctgagagcgagttcatcattgatgaggtcacaggaaag
atttatgcccagagaacattagaccgggaggggcgggcagtttggcgctttgtggtactg
gccacggatgagggcggcgaggggctaacgggattcactgatgtcatcattaatgtatgg
gacataaatgacaacgctcccatttttgcgtgtgcaccagacagttgtcatggcgatgta
tctgagaactcccagcctggcactcctgttatggagatgactgccactgatttagatgat
gcagctgttggacagaatgcagttctggcttatagaattgtgggtaacgcggccttgaat
ggcggtaacagcggggctgatgtgtttagcatcaaccctgctacgggtacagttttagtg
gcaatgtctggtctcgacagggagcagactgatacgtatatcctggtggtggaagctcga
gacggtggaggtatgatagggacagctacggcaactatacacgtgacggatgtaaatgat
cacgtgccacgtttttttgaccggtcttgctcagtacgcatccctgagagcagcgagccc
aacagcgtggtcatagagctgtccgctgaggatgcagatgctggagagaatggtcagctg
acattcagtgtggtggccggtgatcctgagcagaagttttacatggtcagtcatcggcag
gaccagcgcgggacccttcgccttaagaagcgcctggattatgaaagaccgggcgagcaa
cgctttaacctcaccatcaaagtggaggatatggaatattccagcctcctacactgcacc
gtagagatagaagactgcaatgaccacgcccctgtcttcatccctcactttctgcagata
cctgctctacgagaagatgttgctcctggaacaagcttggccagtctggttgccagtgat
ttggactcgggactcaaccgggagatcacttacagcattgctcaagagtccgatccatac
catctgttttctgtggaacaatcagggttggttagtgtgaccagcgagttggaccgggaa
aaggttgcacagcatcacttggtaatattagcgacagaccacggtgtgccacctttgacc
ggcacggcaactatccagatggctctgctagatgtaaatgacaatggcccagagttcgag
gcagtctatgcacctgttgtgtgggagaacgtcatgggaccacaggttgtgcgacttaat
caaagctccatgcttctcagagctgtagacagagattctgaggaaaacggatcacccttt
tctttctctgttcctctggagtatcgctacagcaatgactttcacctccaggataatggc
aatgacactgccaccatcacggccctgagagccttcgacagagagggacagaaggagttt
ttactgcctatcatcatgactgacagcggcattccaccgaagactgtcactaacaccctc
actatcaccatcggggatgagaatgaccacgcccacacagctggacagaagaaagtgttt
ataaactgtcatagagggagaatgcccaccaatgtgctggggaaggtctactcaccagat
ccagatgactgggataacaagacatatgccttcgagggacatgcccctaattatttcatc
ctgaacaagcggacagggttcctcattataaaggaaaacacaccgcccggcagttacgac
tttcaggtgcaggtctcagatgggatgtggccggatgcgatctccagcgtcaaggttaac
gtgagagacctacgagacgatgccatctacaactcagcctctctgcgaatagcagacgtt
tccgccacggagttcatggaacgtcgcggcaatctgaagagcaggtacgagctgctgggc
gacttcttgtcagacatgctgtctgtgggagcagaggacgtcaacatttttagtctggtg
gaggtgcgggagaggacgctcgatgtgaggttcaccgttcacagcgcgccactcctcaga
gctgagaaagtgcacggatacctcgcagctcataaacagaaactacaatcctttcttcag
gttaacgtgactcaggttcatgtagatgagtgtgtggactttgactgtcggggaggggga
ggctgtaccagccatctgagtgtgactgacaagccagcggtggtcgactcgggcagcatg
gctcttgtgtcagtgactgtggaagctgccgctgtctgcatctgctcggcacgcgaacat
tatcaccaggggtgctccgtctatcccagaaacccctgccacaacggaggaatctgtgtg
gacacgcagagtggatacagatgccagtgcccagctcagtttgagggacccgagtgccag
cagacaaaacacagtttccatggcaacggctatgcttggtttccccccataaggccatgc
ttcgaaagccacctctcactagagttcatcacagaggtggcagatggcttgctgctctat
agtggacccgtctcccagcttcagccgtgggagccggaagacttcatggctatagaactg
atcgacggcacccccacccttaaaatcaaccacggctcgggtacgttggtcttgcagttg
ccgggcaacgtgaacgtagcggacagacggtggcacaggctggacgtgaggagcaacagc
aaagaggtgcgttttacacttgaccgttgtgcagcagccacgataatggagatggagggt
gtaggcagctggctaaccactgaagaccacacttcctgtgaagtcaccggtgtcacgcca
aatatggacaggcatctgaacgtcactcaggttcttcagcttggaggagtgaatgagaat
ctgccctatatctatccacagctccaacacaagcacttcaccggctgcatccgaaacctc
atcgtggacagcaagttttatgacttaggatccccagcagactcctttggcagcactcct
ggatgtctcatgactgacagtagctgtgtgaatatgggctttccctcctgcgggaccagg
ggccgctgccacggcgagtggggttccttcagctgtcagtgtattcctgggtacagcggg
catcagtgtgaaaaggaggttccagagtattctttcgatggaaggagtcatgtgcacttt
cagctggccttcacgctccccgccaggcacacgcaggttcaggttcttcttcgaacccgc
aaacacagcagctctattctcaccctgctgtccaaagaacagaatgaatacatcaagctt
gagatctaccagggtctgttaaacgtcttctacaacctcggcgatggggacttcaacctg
acgatgccctcgtatcgtgtagacaacggcgagtggcacgatgttcacttagatcgccac
gacaatgagttgaccctgcgtgtggatggcggcggtggaagaagggaggtcacgggctcg
ccaggtcgcagtcgggagattgttatcgatccagccttggtgatgctgggcaactcattc
ccctcgggacacaacaagagtttccaaggctgtatgcgggacctgagactcagtgggcgg
tttattcctctagatggtcagcccagagagggggtgtcggtggtcagttctcagggtgta
tctttgggctgttcctctgattcctgcaggaaaaatcaatgcagccccccattcacgtgt
gtggatctgtggagaattcatgagtgcaggtgtccatcgggtcacatggtcaaggcaaac
tccacaggaaagttctgcgtgtatacgctgtgtgccagccgcccatgtcaccgaggcacc
tgtgtggcacagtctccctccaaattcacctgtcactgtccagagggttaccgcggtcgg
cactgtgaggtgacgctggccatctaccgggatgacgtgggactcagtttcagctcgctc
tttgccatatgcatctgtttcatggccctgctagtgctgctgttgggaattttcctgtac
actcgctggcggagctataaagggttgaaggagggggtgtatcacgtttctgctcaccat
gacggctgggaggacatccgagagaatgtgctcaactacgacgaggagggcggcggagag
gaagaccagaatgcatacgacatggcagaactccaaaagtctttgcagcccagtccagcc
cagtcggtgcactacagccgttccagagccattcaccaccacccaccttcccagcagcag
caacacttctgccagcctgaccctccctccagagtgggcaccggcaacaccgcctcctcc
tccatctcctccagcaccaccaccgttcgccgggacgtgcccccctcccggtcgccggct
caaggccagacagcaaataccagccgagcggctcagctggcccgcaagagcctgtccttc
tccagccaggatctggcccgctacctatgtgaaattatccgtgatgccgaccagcatcca
gagacggcgccctttgactcccttcaggtcttctccacagaggggggaggctcgctggcc
gggtcgctgagttccttcagctccgctgggctggaagagggaacagcgggtcacgagtgt
ctgaaagagtgggggccgcgcttcgagaagctgaaagccctatatgagcgggcggagggc
agcgacctttga
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integrated database retrieval system