Triplophysa dalaica: 130424871
Help
Entry
130424871 CDS
T09616
Symbol
trim25l
Name
(RefSeq) uncharacterized protein trim25l isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130424871 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130424871 (trim25l)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130424871 (trim25l)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130424871 (trim25l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
DUF948
SSV1_D-63
Motif
Other DBs
NCBI-GeneID:
130424871
NCBI-ProteinID:
XP_056606811
LinkDB
All DBs
Position
6:complement(3744487..3752856)
Genome browser
AA seq
885 aa
AA seq
DB search
MSARLWSEEQFNCPICLDVPTDPTTIPCGHSYCVACIEDYWDNEGRKNGTYSCPECRQDF
NPRPAVCRNTMLADAVEQLRRGTLSTSGRESIKSARRAASSASERTRARNGGPQKRLPAY
AVPCDRCAEPRAAVKTCLVCMASFCEAHLKPHDTQPKLKSHELIAPTGDLSQKICPEHKY
LQEFFCRSCQMYVCWLCTSNQHKGHESASTQTERNEKQKELGPVLSENQQRLQDRERELK
DMKKVLDTLTRSSDAAKEETEAVLSELQESVRRMLQLLQDVMLSAGQEKLNEAQDVVTKL
EAEVKQLKKKDAELKDIINCQDNIYFLKTYQSLCSPLEGVELGAITPNPEATFDPVRNIV
AQLREKVEEMCDQELDKINKTVYNITALTVADQQKTGGIMKLFSAKGSKATRAQGPSPLP
SVSTRGSCTGVTKRTQAVRNNEPRVNRAVTNSPRPERPMREDRDDPDRSQTLMRARETQR
RNEQEHNDAADTRSLSSVRLRGRQSPEQKVQERENQASPRRQSTQSRVNRDEEQADSWSI
SSFGTRQGQLGEEKEQVPADRWSLNSLRTRQRRGDREQDNRETQNSQHKTNTTARQQPDR
QSDRWSLSSLLPKNRKKRQDTVKEATPTIKEETSIPRRLSSASAWGVPTEVNPGLFMDLP
SKEPMMNPAFPTLREINIDSIQAAEPRTRDEILQYACDLTLDPTTAHRRLVLSEGDTVAT
LHQTSLGYPDLPKRFDSWTQVLCLQPLSFERCYWEVEWRGRGSSLGVASSSMARKGADAG
AGLGYNNHSWSLELSDMCCAAMHANHKIEVPVIYSPRVGVFLDRTAGTLGFYSVDDSLVP
IHTFHATFPPQLFAAFGVGCGVGVGLDFAMGQFSSTSDSIKICPL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcgtctgtggagcgaagagcagtttaactgccccatctgtctggatgtaccc
accgaccccaccaccatcccgtgcggtcacagttactgcgtggcctgcatcgaggattac
tgggacaacgagggaaggaaaaacggcacctacagctgcccggaatgtcggcaggacttc
aacccccgacccgctgtctgccggaataccatgctggccgacgccgtagagcagctccgc
cgggggaccctcagcacctccgggcgcgagtccatcaaaagcgcccggcgggcggcatct
tctgcgtccgagcggactcgcgcgcgaaacggcggtccccaaaaacggctgccggcatat
gccgtcccctgcgaccgctgcgcggagcccagggccgccgtcaagacgtgtctggtgtgc
atggcgtcgttctgcgaggcgcacctgaaaccccacgacactcaacctaagctgaagagc
cacgagctgatcgcgcccaccggagacctcagccagaagatctgtcccgagcacaaatac
ctgcaagagtttttctgccgctcctgtcagatgtacgtgtgctggctgtgcaccagcaac
cagcacaagggccacgagagcgcgtccacgcagacagagcgcaacgagaagcagaaagag
ctgggcccagtcctgtctgagaaccaacagagactccaggacagagaacgagagctcaaa
gatatgaagaaagttttagacacactcacgcgctcctcagacgcggcgaaagaggagaca
gaagcggtcctctctgagctccaggagtcagtgcggaggatgctgcagctgctccaggac
gtgatgctctctgccggacaggagaagctcaatgaggcccaggacgtggtcaccaaactg
gaggctgaagtcaaacagctgaagaagaaagatgccgagttgaaagatattatcaactgt
caggacaatatttacttcctgaagacgtaccagtctctatgttcccctctggaaggggtg
gagctgggggccataaccccgaacccggaagccacgtttgatcctgtgagaaacatcgtt
gcccaactcagagagaaagtggaggagatgtgtgaccaagagctagacaagattaacaag
acagtttacaacatcacagcgcttacagtggctgaccaacaaaagacgggaggaattatg
aaactgttctctgcaaagggctcaaaagctactcgtgctcaaggaccctcaccattgccg
tcagtaagcacacgaggatcatgtacaggtgtaaccaaacgcacacaagccgtaagaaac
aatgaaccacgagttaacagagcagtcacaaactctccacgaccagaacggcccatgaga
gaggatagagatgaccctgacagaagtcaaactttaatgagagcaagagagacacagaga
agaaatgaacaagaacataatgatgcagcagacacacggagtttaagttcagtaagatta
agaggtcgacagagtccagaacagaaagttcaggaaagagaaaatcaggcatctccaaga
cgtcaaagcacccaaagtagagtcaaccgtgatgaagaacaagctgacagctggagtatc
agttcattcggaactagacaaggacagctgggagaagagaaggaacaagtcccagcggac
cgctggagtttaaattcactcagaacgagacaaagaagaggcgacagagaacaagacaac
agagagacacagaactcacaacacaaaacaaacacaacagccagacaacaacccgataga
caatctgacagatggagtctgagctctctgctacctaagaacaggaagaagcgacaggac
acggtaaaagaggccacacccactataaaggaggagacatcaattcctcgtagactctcc
tctgccagcgcctggggggtgccaacagaagtgaatcctggtctcttcatggacttgcct
agtaaggaaccaatgatgaacccagcttttcccacattgagagaaattaacattgacagc
attcaggctgcggagcccagaaccagagatgagatcctacaatacgcgtgcgatttgacg
ctggatcccaccactgctcatcggcgtctagttctctccgaaggagacaccgtagctacc
ctacaccagacatctctgggctaccctgacctccccaagcgctttgacagctggactcag
gtgctctgtctccagcccctctcttttgaacgctgctactgggaggtggaatggaggggg
cgtggctcctctctgggcgtggccagcagcagcatggctcgtaaaggggcggatgcgggg
gcaggcttgggatacaacaaccattcgtggagcttggaactgtcagacatgtgctgtgca
gccatgcatgccaatcacaaaatagaggtgcctgtgatctattccccccgcgtgggggtg
tttctggaccgaaccgcaggaactctgggattctacagcgtggatgacagtcttgttcca
atacacacgtttcatgccacatttccaccccagctgtttgctgcgttcggggtgggctgc
ggagtgggggtcgggctggatttcgcaatgggacagtttagctcgacatcagacagcatt
aaaatctgcccattgtga
DBGET
integrated database retrieval system
