Triplophysa dalaica: 130424894
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Entry
130424894 CDS
T09616
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130424894 (fxr2)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130424894 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
130424894 (fxr2)
mRNA cycle factors
Stress granule specific factors
130424894 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
Agenet
KH_1
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
130424894
NCBI-ProteinID:
XP_056606854
LinkDB
All DBs
Position
1:complement(25140000..25155472)
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AA seq
677 aa
AA seq
DB search
MDGVSVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPPNYHKDIC
EGDEVEVYSRANEQEPCGWWMARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
CSQNSFFKVPIAVPEDLREICLTENIHKDFRKAIGANCIFYSASTQQLIVLSTNESTVKR
AGLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARTFLEFKEDSFPVPRNLVGKVIGKN
GKIIQEIVDKSGVVRVRIEGDNDKKLPREDVGRQGEGRNNTVSGQEGLVPFIFVGTKENI
SNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRSGSGVAGERDRGYLTD
DSTNSLQTTRTYGGRGRGRKPNNTYSGYGTNSELSNASETEEIADRDPRPRGVERDDRGS
KRGGRGRGSSAGKGRGGQGPRNTNTISSVLKDPDSNPYSLLEGEGELTGDTDASESMGGN
DHRRRSRRRRNDQEPSLMDATANESDSQAAASENGLEEEGRPQRRNRSRRRRNRGNRPEG
GSASRDRQPGEVTVADFISRPESQSRQNLPGKDETQHATHPNENGTSVSKEDSPSKRSPS
NGVALPGEALTLVNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtgtcggtggaggtgcgtggctctaacggggccttctacaagggtttcatc
aaggatgtgcatgaagactcgctcacaatagtctttgaaaacaactggcaaccggagaga
cagctgcccttcagtgacgtgaggttgccgcccccacccaattaccacaaagacatttgt
gagggagatgaggtggaggtttactccagagctaatgagcaggagccctgtggctggtgg
atggcgagggtgaggatgatgaagggagagttctatgtgattgagtatgcagcctgcgac
gccacatacaatgaaatcgtcacatctgaacgaatccggccagtcaatcccaacagtcct
tgttctcaaaactcctttttcaaagttcccatcgctgtacctgaagacctccgagaaatc
tgtttgaccgagaacatccacaaagacttcaggaaagcaatcggagccaactgtatcttc
tatagtgcatcaacacaacagcttattgtcctgtccacaaatgagtccacagtgaagcga
gcaggccttctgagtgacatgcacttcaggagtattcgtaccaaactcatgttgatgtcc
cgcaatgaggaggccaccaaacacttagagacaagtaaacagctggcgtctgcgtatcag
gaagaagtgagggtgcgtgaggatctaatgggtctcgccatcggttcccatggcgccaac
atccagcaggcccgcaaagttcctggtgtgactgcaattgagctggaagaggagagctgc
acattcaggatctatggagagaccccagaggcagttaaacaggccagaacatttttggag
tttaaggaggattccttcccggtacctaggaacctagtaggcaaagtcattggcaaaaat
ggcaaaatcatccaggagattgtggacaaatctggtgttgttcgggtccggatcgaaggg
gacaatgacaaaaaactgcccagggaggatgtaggcaggcagggggaaggcagaaacaac
acagtcagcggccaagagggattggttccctttatttttgtcggaaccaaagagaacatc
agtaatgctcaggccttgctggaataccatgtggcctacctacaggaggtggagcaattg
cgccttgaacgtctacagatagatgaacaactgcgtcagatcggggtgggatatcgtgct
ccccccagccgctctggttccggggttgctggtgagcgtgatagaggttaccttacagac
gatagcaccaactccctgcagaccacacgcacgtatggaggaagaggtcgtggtcgcaaa
ccaaacaacacatactctggttatggaacaaactctgaattgtccaatgcatctgagacg
gaagagatagcagacagagatccaaggccaagaggagttgaaagagatgatagaggttca
aagcgtgggggtcgtggccgtggctccagcgctggcaagggccggggtggacagggaccc
agaaacactaacactatcagctcagtgcttaaagatccggacagtaacccatactctctg
ctggagggggagggtgagctcaccggtgatactgatgccagcgagagcatgggcgggaat
gaccataggagacgttcacgtcgtcgccgtaatgaccaggaacccagtctgatggacgca
accgccaacgaatcagacagccaggcagccgccagcgagaacggactggaagaagagggc
aggccacagcgccgcaatcgaagtcgccgccgccgtaaccgtggcaaccgccctgaggga
ggctctgccagccgtgacagacagccaggtgaggtaactgttgctgacttcatctctcgt
cctgaatcccagagcagacagaacctcccgggaaaggatgaaactcagcatgcaacacat
cccaatgaaaatgggactagcgtgagtaaggaagactcaccctctaagcgttcccccagc
aacggcgtggctttgcctggggaggctctgaccctggtgaatggcgtttcataa
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