Triplophysa dalaica: 130425062
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Entry
130425062 CDS
T09616
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
tdw
Triplophysa dalaica
Pathway
tdw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130425062 (scn8ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130425062 (scn8ab)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130425062 (scn8ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
130425062
NCBI-ProteinID:
XP_056607088
LinkDB
All DBs
Position
6:14008381..14064285
Genome browser
AA seq
1968 aa
AA seq
DB search
MAAQLLAPPGPDSFKRFTPESLANIEKRIAEEKKKKPVKPRSDSSHRDDDDDNKPKPSSD
LEAGKSVPFIYGDVPSNMLAVPLEDLDPYYINEKTFIVLNKGKTIFRFSATPSLYIISPF
NLFRRIAIKILIHSLFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLTKIV
ARGFCIDGFTFLRDPWNWLDFMVISMAYITEFVNLGNVSALRTFRVLRALKTVAVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINQTQSLLANGSS
GFDFNEYIMNETNFYFLPGQLDALICGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGW
AFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATIEEAEQKEAEFKAMLEQLKKQQEDAQANAMATSAGTVSEDAVEDDGGGHLSRSSSEV
SKLSSKSAKERRNRKKKWRKEQEEKGDTEKVVKSESDDGSKRSRFRFRDNRLGRKASIIN
QSLLSIPGSPFMSRRSSIFSFKGSENEFADDEHSTVEESEDRRGSLFVPYRRSSYSGYSQ
GSSRINPLAPHPGCKRNSTVDCNGVVSLIGPGTGRLLPEVKIDKAASDDSTTEVEVKRKH
SGSLMVSVDQLNTSFSRKERANSAMTVVTNTLVEELEDSQRKCPPFWYKFANTFLIWECF
PLWMKIKEIMNLIVMDPFVDLAITICIVLNTVFMAMEHDPMTDHFAQVLSTGNLVFTGIF
TAEMFAKLVAMDPYYYFQEGWNIFDGFIVSLSLVELLLSDVEGLSVLRSFRLLRVFKLAK
SWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAEKCELPR
WHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALL
LSSFSADNLAATDDDGELNNLQISVIRIKKGIAWFKVHMRLLIAHVLKKKPLEDEDKPLD
DMFDKKLNIIGNHTGVDIKCDLNYPKNGNGTTSGIGSSVGKYMIDEEPMSFIHNPNLTVR
VPIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDEEEMAAVEVVEEYL
DPEACWTDACIARYKCCDVPITEGWGKYWWFLRKTCYLIVEHNWFETLIIFMILLSSGAL
AFEDVYIEQRKTIQIILGYADSVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVS
IVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCL
IFWLIFSIMGVNMFAGKYHYCFNMTSEELFDAKLVDNKSECLGLIESNYTEVRWKNVKIN
FDNVGAGYLALLQVATFKGWMDIMYAAVDSRGVNDQPIYEDNIYMYIYFVIFIIFGSFFT
LNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNPIQGMI
FDFVTQQAFDISIMILICLNMVTMMVETDDQTKDTENILYWVNFIFIVSFTGEFVLKLFA
LRHYYFTNGWNVFDSVVVILSISGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAK
GIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKRELGIDDMYNFETFGNSM
ICLFMITTSAGWDGLLAPILNYPPDCDPNKENPGTTVKGDCGNPSVGIFFFVMYIIVSFL
IVVNMYIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPDACQFITFAKLPDFADTL
EHPLRVPKPNIIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFVA
ANPSKVSYEPITTTLRRKQEEVSAMVIQRAYRSHLASRGFICKRRPANNKLENGGANQEK
KEGTPSTASLPSYDSVTKPEKEKQDDNNEGKGRKEKGRNQKDVRESKC
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcagctgctcgcacctccaggccccgacagcttcaagaggttcacccctgag
tcgctggccaacatcgagaagcgaatcgccgaggagaaaaagaagaagcctgttaagccc
agatctgacagcagtcaccgtgatgacgatgatgacaacaaacccaagcctagctctgac
ctggaagcggggaagagcgtcccttttatttatggggatgtcccttcgaacatgttggcc
gtgcccctggaggacttggacccctactatataaacgagaaaacctttatagtgcttaac
aaggggaaaacgatcttccgtttcagtgccacgccctcattatatatcattagccctttt
aacctatttaggcgaatagcaattaaaattttgatacactcacttttcagcatgatcatc
atgtgtacaattttgacaaattgtgtgttcatgacattcagcaatcctccagaatggtcc
aaacaagtagaatacaccttcacgggtatctacacattcgagtcactcacaaagattgtg
gctcgaggtttctgtatagacggcttcaccttcctcagagacccctggaactggctggat
ttcatggtcatttccatggcgtatattacagagtttgtaaacctaggcaatgtgtcagct
ctgcgcacattcagggtgctgagggctttgaaaactgttgctgtgatcccagggctaaaa
accattgtgggcgctctgatccagtcagtgaagaagctgtcagatgtgatgattctgaca
gtgttctgtttgagtgtttttgcactcatcggcctgcagctgtttatgggtaatcttcgg
caaaagtgcgtcatctggccaatcaaccaaacacaatccttactggctaatgggagcagc
ggctttgacttcaatgaatacatcatgaatgaaacaaacttctacttcctgccaggccag
ttggatgctttaatatgtggaaacagctcagactcagggcgctgtccggagggctacacc
tgcatgaaagctggacgcaacccaaactatggctacactagctttgactcctttggctgg
gcttttcttgccctcttccgactcatgactcaagacttctgggaaaatttgtaccaactg
actctacgagctgcagggaaaacgtacatgatcttttttgtgctggtgatcttcgtgggt
tcattctaccttgtgaatctgatcctggctgtggtggccatggcttatgaggagcagaac
caggccaccattgaggaagctgaacagaaggaggcggagtttaaagccatgctggagcaa
ctaaaaaaacagcaggaggatgcacaagcaaatgctatggcgacctcagcaggtacagta
tctgaggatgcagtagaggatgacgggggaggacatctgtcccgcagttcttctgaggtg
tctaagctgagctccaaaagtgccaaggagcgaaggaacagaaagaaaaagtggcgtaaa
gaacaggaagaaaaaggcgacaccgagaaggtagtgaagtcagaatccgatgacggcagc
aagaggagccgctttcgattccgagacaacaggcttgggcgaaaggcctctattattaac
cagtccttgttgagtatccccggctcgcccttcatgtcccgtcgcagcagtatattcagc
ttcaagggctcagagaacgagttcgcagacgatgagcacagcacggtcgaggagagcgaa
gaccggcgcggatcccttttcgtcccctacagacgcagcagctatagcggctacagccaa
ggttcctcacgcatcaacccgctggcgccccatcctggctgcaaaagaaacagcacggtg
gattgcaacggtgttgtgtcactgatcgggcctgggactggccgcctactgcctgaggtg
aaaatagataaggcagcttccgatgacagtaccacagaggtggaggtgaagagaaaacat
tcaggttctttaatggtatcagtagaccagctcaatacctcctttagccggaaagagcga
gccaacagtgcgatgacagttgtcaccaacacgctggtagaagaactggaggattctcag
agaaaatgtccgcctttttggtataagtttgccaatacgttcctgatatgggagtgtttc
ccgctctggatgaaaataaaggaaattatgaacttgatagtgatggatccatttgtagat
ctggccatcacaatatgtattgtgctcaacacagtcttcatggccatggagcatgacccc
atgacagatcactttgcacaagtgctttctactggaaacctggtgttcacaggtatcttc
acagctgagatgtttgccaagctggtagccatggatccatactactacttccaagagggc
tggaatatctttgatggcttcatcgtgagcttgagtttggtggagctgctgctgtctgat
gtggaggggctgtctgtgctcagatccttcagattgctgagagttttcaagttggctaaa
tcatggcccactctgaacatgctgataaagatcattggtaactcagtgggagctttggga
aacctgaccctggtgctggccataatcgtcttcatcttcgctgtggtgggcatgcagcta
tttgggaagagctataaagagtgtgtgtgtaagattgcagaaaagtgtgagctgcctcgc
tggcacatgaacgacttctttcactctttcctcatcgtgttccgtgtgctgtgcggagag
tggatcgagaccatgtgggactgtatggaggtggcagggcaaacaatgtgtctcacagtc
ttcatgatggttatggtcattggaaacttggtggtgctgaacttgttcttggccttgctg
ctcagctccttcagtgctgataatctggcagccacagacgacgacggcgagttgaacaac
ctgcagatctcagtgattcgcatcaagaagggcatcgcctggttcaaagttcacatgagg
cttctgatagcccacgttctgaagaagaaacctctggaggacgaggacaaacctcttgac
gacatgtttgacaagaaactcaacattataggcaaccacactggcgtggacatcaaatgt
gatctcaactaccccaaaaacggtaacggtaccacaagtggcatcggcagcagtgtcgga
aagtacatgatcgacgaggaacccatgtccttcatacacaaccccaacttaacggttcgg
gttcctatcgctgtgggagagtcagactttgagaacctcaacacggaggacttcagcagc
gagtcggatgtggaaaatagcaaagatctggatgacaccagctcttctgagggaagtact
atagatataaagccggatgaggaggaaatggccgcagtagaggtggtggaggagtacttg
gacccagaggcctgctggaccgacgcttgcattgcacgttacaagtgttgtgacgtgccc
atcactgagggctgggggaagtactggtggtttctaaggaaaacctgctacctcattgtt
gaacacaactggtttgagaccctcatcatttttatgattctgctcagctctggggctctg
gcatttgaggatgtgtacattgaacagaggaaaactatccagatcattctaggatatgcg
gacagtgtcttcacatacatctttattttggagatgttactgaaatgggtggcctatggg
tttgtcaaatacttcaccaatgcatggtgttggctggacttcttcattgtggacgtgtct
atagtcagccttatagctaatgcgctgggctactcagacttgggccccataaagtccctg
aggactttgagggctctcaggcccctgagagctttgtcccggtttgagggcatgagggtt
gttgtgaacgctctggtgggtgccattccctccattatgaacgtgctgttggtgtgttta
attttctggctgatcttcagcatcatgggtgtcaatatgtttgctgggaagtaccactat
tgcttcaatatgacctcagaggaactctttgatgctaagcttgtcgacaacaaatcagaa
tgcctaggactcatcgaatcaaactacactgaagtccgttggaagaatgtgaagatcaat
ttcgacaatgtgggcgctggttatctggcactcctgcaagtggcaactttcaaaggatgg
atggacatcatgtatgctgccgtggattccagaggggttaatgaccagccaatctatgag
gacaatatctacatgtatatatattttgtgatcttcataatcttcggctccttcttcact
ctgaatctctttattggtgtcatcatcgacaactttaaccaacagaagaaaaagtttgga
ggtcaggatatcttcatgacagaagagcagaaaaagtactacaacgctatgaagaaacta
ggttcgaaaaagcctcagaagcccatccccagaccgctgaacccaatccaggggatgata
tttgactttgtcacccagcaggcctttgatatctctattatgattctcatctgtctgaac
atggtaactatgatggtggaaacagatgatcagacgaaggatacagagaacatcctgtac
tgggtaaacttcatattcatcgtgtctttcacgggcgagtttgtcttgaagctatttgct
ctgcgacactactatttcaccaacggctggaacgtctttgactccgttgttgtcattctg
tccattagtggtatgtttctggcagacctgattgagaagtactttgtgtcaccaaccttg
ttcagggtaatccgtctggctcgaatcggccgcattctgcgtctcatcaaaggagccaag
ggcatccggacattactgttcgctctgatgatgtcacttcctgctctgtttaacattggt
ctgctgcttttcctcgtcatgttcatcttctccatctttggcatgtctaatttcgcctac
gtgaagcgagaattaggaattgatgacatgtataactttgaaacctttggcaatagcatg
atctgtctattcatgatcaccacgtcagccggctgggacggtctcttagctccaatcttg
aactatccgcctgactgcgaccctaataaagagaacccaggaacaactgttaaaggtgac
tgcggtaatccatcagtgggaatcttcttctttgttatgtacatcattgtttcctttctg
atcgtggtgaacatgtacatcgccatcatcttagagaactttagcgttgccactgaggag
agcgccgatccgctctgtgaagatgactttgagtccttctacgagatatgggagaagttc
gatccggatgcttgtcagttcatcaccttcgccaagctgccagactttgcagatacgtta
gagcatcctctccgtgtgccaaagccaaacatcattgagttgatcgccatggatctgcca
atggtaagcggcgaccgcatacattgcttggacattctgtttgccttcaccaagcgtgtg
ctgggtgacagcggcgacctggatatgatgcggcagcaaatggaggagcgcttcgtggcg
gcaaatccctccaaagtttcctacgagcccatcaccaccacgctgcgccgcaagcaggag
gaggtgtcggccatggtgatccagagagcgtaccgctcgcacctggcgtcccggggcttc
atctgcaagcgcaggcctgccaacaacaaacttgagaacggaggagccaatcaggagaag
aaagaaggcactccctccaccgcatccctgccatcttacgacagcgtaaccaagcctgag
aaggaaaagcaagatgacaacaacgaaggaaagggacgcaaagagaaaggcagaaaccaa
aaagacgtcagggaatccaagtgttaa
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