Triplophysa dalaica: 130425086
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Entry
130425086 CDS
T09616
Name
(RefSeq) cystathionine gamma-lyase-like
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00260
Glycine, serine and threonine metabolism
tdw00270
Cysteine and methionine metabolism
tdw00450
Selenocompound metabolism
tdw00670
One carbon pool by folate
tdw01100
Metabolic pathways
tdw01230
Biosynthesis of amino acids
Module
tdw_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130425086
00270 Cysteine and methionine metabolism
130425086
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130425086
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130425086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130425086
Enzymes [BR:
tdw01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
130425086
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130425086
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
130425086
NCBI-ProteinID:
XP_056607121
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Position
6:15240652..15251470
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AA seq
404 aa
AA seq
DB search
MASRVQNDISAGFLQEFKSFATDAIHVGSEPEQWNSMAVVPPISLSTTFKQHGPGKHAGF
EYSRSGNPTRNCLEKAVAALDGAKYCLAVASGLAATLTITHLLKTGDGIVCMNDVYGGTN
RYFSKIAAEVGLDVSFEDCTTLELLKAALKPNTKMVWIETPTNPTMKVVDIQGCADIVHE
HNKDTLVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLMSLNNDDLYERLK
FLQNALGAVPSPFDCYMCNRGLKTLHLRMKQHFKNALAAAQFLEADPRVDKVIFPGLPSH
PQHELTKRQCTGCPGMITFYIKGNLEHASTFLSNLKLFALAESLGGYESLAEHPAIMTHA
SVCENERKKLGISDTLIRLSVGIEDEEDIIADLDQALSAAHPKK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacgtgtacagaacgacatctcagccggcttcctacaagagttcaaatcattc
gccacagacgcgatccacgttgggtcagaaccggagcaatggaactctatggccgtagtg
ccccctatttcattgtctaccacatttaaacagcacggtccgggaaaacatgcgggtttt
gaatacagcaggagtggaaaccccacacgcaattgtcttgaaaaagcagttgccgctttg
gatggtgcaaaatactgtctcgctgttgcctcggggttagctgccactttgaccatcaca
catttgttaaagactggagatggaattgtgtgcatgaatgatgtctatggaggtactaac
cgatatttcagtaagattgcagctgaagtgggccttgatgtgtcatttgaagactgtaca
acgctagagctgctaaaggcagctcttaaaccaaatacaaagatggtgtggattgaaact
cccacaaaccctacaatgaaggttgtggacattcagggctgtgcagacattgtccatgag
cacaacaaagacacacttgttgttgtggacaacaccttcatgtcagcctattttcagcgc
cctcttgcccttggagcggatatctgcatgtattctgcaacaaaatacatgaatggacac
agtgatgttgtcatggggttgatgtctctcaacaacgatgacctttatgaacggcttaaa
tttttgcagaatgcacttggagccgtgccctccccatttgactgctatatgtgtaatcga
ggtctgaagacactacacctcaggatgaaacagcactttaagaacgcattggctgcggca
cagtttctggaggctgacccaagggtggataaagtcatcttcccaggtcttccttctcat
cctcagcatgagctgacaaagagacagtgcacaggctgtcccgggatgatcaccttctac
atcaaagggaatctggagcatgccagcacatttctaagcaatctgaagctgtttgctctt
gctgaaagtcttggtggttatgagagtctagcagagcatcctgcgattatgactcacgct
tcagtgtgtgagaatgagaggaagaagctgggtatctccgatacgctcattcgtctgtct
gtggggatcgaggatgaggaagatattattgcagatttagaccaagccctcagtgctgct
catcccaaaaaatga
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