Triplophysa dalaica: 130425095
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Entry
130425095 CDS
T09616
Symbol
rin2b
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130425095 (rin2b)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130425095 (rin2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
Lpg0393_VPS9
RA_3
FERM_f0
Motif
Other DBs
NCBI-GeneID:
130425095
NCBI-ProteinID:
XP_056607134
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All DBs
Position
6:complement(2587124..2605725)
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AA seq
899 aa
AA seq
DB search
MATDSALQPSRLDRTSSYLQLVDAFAYSLGELEQQMVYAQETDEDPDPSLFVQIEVEMSG
VCLEYPGADGDVVGTSVSVLEKLIHTHPIWLLLSIDQQEATNILLKQPAGVFLVWRSHVL
QKKVLSFHVDETSDSVIHIPVKESQYTFSLEESGISFADLFHLVAFYCISRDILPSTLKL
PDAVGSAETLSDLHEVAQRGAAFWKSALNRQHKKLCIPDGFLDHERGPFSDISQIEDQTG
LFLNTSEGGKNCASALSFINPVFYQQQHPAGNTVVIAKDPTTANGKSGPPPPPRPPPPRI
LVRRPSPPGPRSMPLNINFNRLSQRSKSGSKGSKQSSSKKPPPRPPQAPDIDNYRCTIAL
DDETISRALSRANLPHTPLNQTNKNVLQQWTGPEEKGRSSSGRSFSTSSSDSLDSPPKPL
PLSLFPSTAPGLSTDDSSGEYEEEEEDYGVGLEKDLHLRLSASRKSKKIMAVELAGARPR
SFVILPQAFRGRFRKVRGVLNVLATPERRILLRIIELAQDKGSYFGCLVQDYVSFVQENK
NCQSSSQDLLKTLRQFMTQMKAYLIQSSEINPPIESYIPEDQIDAVLEKAMHKCVLKPLY
GSVQSALHEFQVASGSWGKLQENLALAKTKKPRELGANAARPPDSHAIHRIRRKLTAMCR
MYSPERKIVVLLKVCKLIYSIMQDQTVRLFGADDFLPMLTYVLVQCDMPQLDTEIMYMME
LIDPPQLHGEGGYYLTSAYGAMSLIKNFQEEQAALVLSSTTRDTLHQWHQRRTMLKDLPS
VDDFQNFLRVALRTPDSGCTAKTLQVRPYATTEEVCRLCALKFHVSDPENYGLFLFTDES
SQQLTADTRPQWIKAELHSRPNPPSFHFVYRGXTNISRCLLAHQNHGNCHKDKTSKRTA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagactctgcattacagcccagtcgtttggaccgcaccagtagctacctccag
ttggtggatgcttttgcatattcactgggtgaactggagcaacaaatggtttatgcacag
gagacagatgaagatccagatccctctttgttcgtacagatcgaggtagagatgagcggt
gtgtgtctggagtatcctggggctgatggagatgttgtgggcacgagtgtgagtgtgttg
gaaaaactgatacacacacatcccatctggcttctgctttccatcgaccagcaagaggcg
acaaacattctactgaaacaaccagctggggtgtttttggtgtggagatcccatgtctta
cagaagaaggtcttgtctttccacgtggatgaaacctcagattcggtcatacacatccct
gttaaagagagccagtacacattttctctggaggaatcaggaatcagttttgctgacctg
tttcatcttgtggccttttattgtataagcagggacattttgccatccaccctgaagctt
ccggatgccgttggctcagctgaaactctttctgatctgcatgaggttgcccagcgaggg
gcagcgttttggaagtctgctctcaaccgtcaacacaagaaactttgtatcccagacggt
tttctggatcacgagagaggaccattctctgacatctcacagattgaggatcaaactggc
cttttcctaaatacttcagaaggtggaaaaaattgcgccagtgctttgtcttttatcaac
ccggtcttttatcaacaacagcatcccgctggaaacacagtcgtgattgcaaaggacccg
acaacagccaacggaaaatctggtccgcctcctccaccaagacctccgccaccacgtatt
ttggttcgtagaccttcacctcctggtccgagaagtatgccgttaaacatcaactttaac
agactcagccagagatccaagtctggctccaagggatccaaacaatcctcttccaaaaaa
cctccgccacgacctcctcaagctccagatattgacaattaccgctgcaccattgcattg
gacgacgaaacgatctctagagccctgtcccgagccaacctgccccacactcccttaaac
caaaccaacaaaaacgtcctacagcaatggacaggacctgaagagaaaggacgaagctcg
agcggccgaagtttttccacttcatcatctgactctctggattctcctccaaagcctctc
ccgttgagcctgttcccaagcacggctcccggcctctccacggatgacagcagtggtgag
tacgaggaagaagaggaagactacggtgtggggcttgagaaagacctgcatctccggctt
agtgcttcccgcaagtcaaagaaaataatggcggtggaattagcgggggctcgtccgaga
tcgttcgttattttaccacaggcgtttaggggacgcttccggaaggtccgaggtgtcctc
aatgttctggctacacctgagagacgcatcttgctgcggatcattgagctagcacaggat
aaaggttcttactttgggtgtctggtgcaagactacgtgagctttgtgcaggagaataaa
aactgccaatcgtccagccaagatcttctgaagacactacgacagttcatgacccagatg
aaggcctatctcatacagagctcagagattaacccacccattgagtcttacatacctgaa
gaccagatcgatgcagtgttggaaaaggccatgcacaaatgtgtgctgaaacctctgtac
ggttcagtgcagtcggccctgcatgagttccaggtggccagtgggtcgtgggggaagctc
caagagaatctggccctggccaagaccaaaaaacccagagaactgggggcgaacgcagcc
aggccaccagacagccacgccatccatcggatacgcagaaaacttacagctatgtgcagg
atgtactcgcccgagaggaagatcgtggttctgttgaaagtgtgcaaactcatctacagc
attatgcaagatcaaacagtgcggctgttcggagcggatgattttctgcccatgttgaca
tacgtgttggtccagtgtgacatgcctcagctggacacagagatcatgtacatgatggag
ctgatagatccaccacagctacacggagaaggtggttattacctcactagtgcgtatgga
gcgatgtcactcatcaagaacttccaggaagagcaggctgccctagtcctcagttcaaca
acacgcgacacactccaccagtggcaccaacggcggaccatgctcaaagatctgccctct
gtggatgactttcagaatttcttgcgtgtggctttgcggacgccggacagcggctgcaca
gctaaaaccctgcaggttcggccgtacgccaccacggaagaggtgtgccgcctttgtgcc
ctcaaattccacgtgtccgatcctgaaaactacggcctttttctctttacggacgaaagc
agccagcagctgaccgcagacacacgtcctcagtggattaaagcagaactacatagtcgg
ccaaaccctccgtcttttcattttgtttacagagganncacaaacataagcagatgcttg
cttgcccatcagaatcatggaaactgccataaagacaaaaccagcaagagaactgcgtaa
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