Triplophysa dalaica: 130425102
Help
Entry
130425102 CDS
T09616
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130425102 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130425102 (prpf38a)
Spliceosome [BR:
tdw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130425102 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
130425102 (prpf38a)
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
130425102
NCBI-ProteinID:
XP_056607144
EnsemblRapid:
ENSTDLG00000021242
LinkDB
All DBs
Position
6:16848511..16851785
Genome browser
AA seq
313 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
FGGNIKPTPFICLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFEVMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKQERVQSPEPHRRAYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERERDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKSRRRGNE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaatagaacagttaaagatgcgaatagtatacacggaacaaatcctcagtatctt
gtagagaagattataaggacacgtatttatgagtccaagtattggaaagaggaatgtttt
ggacttacagctgagcttgttgtggacaaagctatggaactgaagtttgttggtggagta
tttggaggaaacatcaagccgaccccattcatatgcctgaccctgaaaatgctccagatc
cagcctgaaaaggacatcattgtggagtttatcaagaacgaagattttaagtatgttcgt
ttgcttggagcgatgtacatgcgtctgactggaacttcagtggattgctacaaatattta
gagccattatacaatgactacaggaaaatcaagagccagaatagaaatggagagtttgag
gtgatgcatgtagacgagttcatagatgagcttcttcatgcagagagaatgtgtgacatc
atccttcccagacttcagaagagacaggttttggaggaggctgaactcctggatacccgc
attagtgccctagaggaagacctggacgaggtggagaccagtgatgaggaggatgaggaa
gaagagaagcaggaaagagttcagtcaccagagccgcacagaagggcttacagagatatg
gatcggccacgcagatctccatctccacgctacagacgaagtcgctcacccagaagaagg
agcagatcacctaaaagaagaagcccatcacccagacgtgagcgagagcgggatcgtcac
cgcagcaaaagcccccgtagacatcgcagcagatccagggacagaagacatcgttccaaa
tctccaggtcaccatagaagccaccggcatcgcagccactccaaatccccagaaagtcgg
tctaagaagagtcataagagtcgtcgaagaggaaacgagtga
DBGET
integrated database retrieval system