KEGG   Triplophysa dalaica: 130425102
Entry
130425102         CDS       T09616                                 
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
tdw  Triplophysa dalaica
Pathway
tdw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130425102 (prpf38a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdw03041]
    130425102 (prpf38a)
Spliceosome [BR:tdw03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    130425102 (prpf38a)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    130425102 (prpf38a)
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 130425102
NCBI-ProteinID: XP_056607144
EnsemblRapid: ENSTDLG00000021242
LinkDB
Position
6:16848511..16851785
AA seq 313 aa
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
FGGNIKPTPFICLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFEVMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKQERVQSPEPHRRAYRDMDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERERDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKSRRRGNE
NT seq 942 nt   +upstreamnt  +downstreamnt
atggctaatagaacagttaaagatgcgaatagtatacacggaacaaatcctcagtatctt
gtagagaagattataaggacacgtatttatgagtccaagtattggaaagaggaatgtttt
ggacttacagctgagcttgttgtggacaaagctatggaactgaagtttgttggtggagta
tttggaggaaacatcaagccgaccccattcatatgcctgaccctgaaaatgctccagatc
cagcctgaaaaggacatcattgtggagtttatcaagaacgaagattttaagtatgttcgt
ttgcttggagcgatgtacatgcgtctgactggaacttcagtggattgctacaaatattta
gagccattatacaatgactacaggaaaatcaagagccagaatagaaatggagagtttgag
gtgatgcatgtagacgagttcatagatgagcttcttcatgcagagagaatgtgtgacatc
atccttcccagacttcagaagagacaggttttggaggaggctgaactcctggatacccgc
attagtgccctagaggaagacctggacgaggtggagaccagtgatgaggaggatgaggaa
gaagagaagcaggaaagagttcagtcaccagagccgcacagaagggcttacagagatatg
gatcggccacgcagatctccatctccacgctacagacgaagtcgctcacccagaagaagg
agcagatcacctaaaagaagaagcccatcacccagacgtgagcgagagcgggatcgtcac
cgcagcaaaagcccccgtagacatcgcagcagatccagggacagaagacatcgttccaaa
tctccaggtcaccatagaagccaccggcatcgcagccactccaaatccccagaaagtcgg
tctaagaagagtcataagagtcgtcgaagaggaaacgagtga

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