Triplophysa dalaica: 130425337
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Entry
130425337 CDS
T09616
Symbol
cntn4
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130425337 (cntn4)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
Contactins
130425337 (cntn4)
BRITE hierarchy
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_C17orf99
V-set_CD47
C2-set_2
Sp38
Tissue_fac
Pur_ac_phosph_N
Ig_6
NDNF
Motif
Other DBs
NCBI-GeneID:
130425337
NCBI-ProteinID:
XP_056607581
EnsemblRapid:
ENSTDLG00000002792
LinkDB
All DBs
Position
6:21320914..21444240
Genome browser
AA seq
1040 aa
AA seq
DB search
MRVDFDRTKLKMKLLWKLLLLQSFMGCLAAGNTLQSPVFTKQPGSIVFPVDSMEKNKEVV
FSCEAQGHPPPFYRWKLNGTLINPKPGSHHSLSGGNLRITHLNKDEDAGTYQCLASNSFG
TIVSREASLTFAYLENFKTHRRNSVSVREGQGVVLLCGPPPHSGALTFSWIFNEYPSFVK
QDSRRFVSQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLILRTDGVMGEYEP
KIEVQFPEVVQVAKGSTVRLECFALGNPVPSISWRRVDGVPFSRKVDVRKTSGVMEIPYF
QQEDAGTYECVAENTKGRNSVQGKLSFFAAPQLIEKPQDVQKAIEDSLVWECKATGKPKP
SFRWMRNGENLEPTEERVQVINGALSITRLALSDIGMYQCVAGNKYGEVYSNAELTVIAV
APDFSQNLLKSHTLVKEGGDVLIECKPKMSPRGAISWRKGNDALRESSRVAILETGALRI
SNVTKPDAGTYTCVARNQFGVASSSGNLLVKEPTIITTTPSTLDVTVGESIILPCQVSYD
PSLELKFTWFFNEQLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDS
SSIATDLIVRGPPGPPTSIHVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQA
VSTVPEVVVGSHLTATVIELNPWVEYEFRVLASNAVGMGEPSKPSKKARTKETLPKITPA
NVSGGGGSRSELVITWEPVPEELQNGAGFGYVVAFRPFGATGWMQAAVPSAEASKYIFKN
ETILPFSPFQVKVGVYNNKGEGPFGPVVNIYSAEEEPGRAPTRVRAKSLSAFDVEVSWKA
LPWSTSKKRVLGYELRYWEKNEKEDTASVLRTVGNRTLTIIQGLKGSSTYYITVRAYNTA
GTGPPSQPVNVTTKKPPPSQPPSKVMWNTSNSKIILNWEQVKPLENESEVMGYKVLYKRN
RFSRPTVMETNTTSVELSLPTDEEYFIQIKPFGEGGEGSSSRQITIPRISGPNAVGSASS
VSTLSALSTIALSLTARTSL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttgactttgaccgaaccaaactgaagatgaagttgctatggaaactgctgctg
ctgcagtcattcatggggtgcctcgcagcaggcaacactctgcagagccccgtgtttacg
aagcaaccgggcagcatcgtgtttccagtggactccatggagaagaacaaggaggtggtt
ttcagctgtgaagctcaaggtcacccgcctcctttttacaggtggaaacttaacggaacc
ttgatcaaccctaaacctggatctcaccacagcctttctggaggcaaccttcgcatcacc
catctcaataaagacgaggacgctgggacctaccagtgcctcgcatccaactcctttggg
actatcgtcagcagggaggccagtctaacctttgcatacttggaaaacttcaaaacccac
aggcggaattctgtgtctgtcagggaagggcagggggtggtgcttctttgcggaccgccc
cctcactcgggagcgctgacgttctcttggatttttaacgagtacccgtccttcgtgaag
caggactcccgtcgtttcgtgtcccaggagacggggaatctatacatcgctaaagtcgag
ccatccgacgtgggcaactacacctgcgtcgtgaccaacaccgtcaccaagacacgtgtc
caaggcccgcccactcctctcattttgcgcactgacggtgtcatgggagaatatgaacca
aagattgaagtgcagtttccagaagttgttcaggtggccaaaggttcgacagttcgccta
gaatgttttgcattggggaatccggtaccttccataagctggcgccgagtggacggagtc
cccttctcccgcaaagtggacgtgagaaaaaccagcggagtcatggaaatcccgtacttc
cagcaagaagacgcgggcacgtatgagtgtgtcgcggaaaacaccaaaggtcgaaattct
gtgcaaggaaagctgtctttctttgctgctccccagctaattgaaaagccccaggatgtg
cagaaggccatcgaagactctttggtgtgggaatgcaaggccacggggaaacctaaaccc
tcctttagatggatgaggaacggagagaacctggagcccactgaggagagggtccaggtc
attaatggagccttgtccatcacccgcttggcgctgtcggatattggaatgtaccaatgc
gtggctggaaacaagtacggggaggtttattccaatgctgaactcacagttatcgctgtc
gctccagatttctctcagaacctgctgaagagccacactctggtgaaagagggtggcgat
gttctgattgaatgcaagcctaagatgtctccgcgtggagcgatctcctggcgcaaaggc
aacgacgccctcagagaaagcagcagagttgctattttggaaaccggagctcttcgaata
tccaacgtaaccaaaccagacgctgggacgtatacgtgtgttgcccgtaaccagtttgga
gtggcgagcagttcaggaaacctgcttgtcaaagaaccaacgatcataacaaccaccccc
tcaacgctggatgtgactgtgggcgagagcattattctgccctgtcaggtgtcttacgac
ccctcgctggagctcaagtttacctggttcttcaacgagcagctcattcactttggcagc
catggaggatactttgaaaaagtcggaggacagcactcggcaggtgacatcatgatccgg
aacattcagctaaggcatgctgggaaatacacgtgtgctgtgcagaccaaggtggacagc
agctctattgccactgaccttattgttagaggtccccccggtccccctaccagcatccat
gtggaagaaatcacagataccactgctactctctcctggaggcctggtcctgataatcac
agtccaattactgcctacaccatccaggctagaacccctttctccctgggttggcaagct
gttagcacagtgccggaggttgtggtgggctcgcatctgacagcaacagtaatcgagctc
aacccctgggtggagtacgagttcagagtgttggcaagcaatgcggtgggcatgggggag
cccagcaaaccctcaaagaaagcaaggacgaaagaaactcttcccaagatcaccccagcc
aatgtgagtggaggaggtggcagtcgatcagaattagtcatcacttgggagcccgttcct
gaggagctccagaacggagcgggattcggctacgttgttgctttcaggccctttggcgcc
accgggtggatgcaagcggcagttccatctgccgaagcctccaaatacatcttcaaaaac
gagaccatcttaccattttccccctttcaagtcaaagtgggggtttacaataacaagggg
gaaggacctttcggaccagtggtcaacatttattccgctgaggaggagcccggaagagca
cctacccgagtcagagccaaaagtctttcggcgtttgatgtggaggtgtcttggaaagct
cttccttggagcaccagcaagaaacgtgttctgggatatgagttaagatactgggagaag
aatgagaaagaagatacagctagtgtactcaggacagtaggaaatcggacactgacgatt
attcaaggcctgaagggcagcagtacctattatattactgtacgggcctataacactgca
ggtacaggaccaccaagccagccggtcaacgtcaccaccaaaaagccgccacccagccaa
cctccttcaaaagtgatgtggaatacatcaaacagcaaaattattctaaactgggaacaa
gtgaaacctctagaaaatgagtctgaggtcatggggtataaggtcctgtacaagcgcaac
agattcagcaggcccaccgtcatggagaccaacaccacgtctgtggagctttccctgccc
acagatgaggaatacttcatccagatcaaaccatttggggaaggtggggagggcagcagc
agccggcagatcaccattcccagaatatcaggtcccaatgctgtcggctccgcttccagc
gtctccactctctcagccctcagcacaatagctctatcgctcacagcccgaacatcttta
tga
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