Triplophysa dalaica: 130425683
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Entry
130425683 CDS
T09616
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130425683 (rbbp6)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130425683 (rbbp6)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
U-box type E3
130425683 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
SR-25
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Siva
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130425683
NCBI-ProteinID:
XP_056607997
LinkDB
All DBs
Position
7:14527998..14544480
Genome browser
AA seq
1765 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
AALIPKNSSVIIRRIPIGGVKSTSKTYLIDRSEQSSGSSKAIDDSSSISLALLSKTANLA
ETNASEEDKIKAMMSQSNHEYDPINYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDR
SFEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGIYAIPTIDAEAYAIGKKEKPPFLP
QNQSSSSEEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESDEHVCPTCK
QSDVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAAAAQSATSGSQTQAPLQRPPMRRQ
QDPLMANVPSSTAASTPPQSMPAAALSPAATPQPSSTPPPASSSSTQSSNAPSGPDNSPT
VNSPQHSTKQDDPPLSKESEVPASAPVPSSEASAPTNIASKGFHVPVIGQPNVPQHVMHR
TGQPRPSGPRPTQSRPNWDQSTSRGRPPIDRPPRTQPLPLQNLPPVPCPGGPMFMPPALF
PPPPHPMPQPPGVIPPQYPMAFPPGQQPPPPFNLPPPVYPPVPPNVQVPWVPPGTQPPIA
NPISSMPAEPFLSKEEFYRQQRRLKEDSQCRFVAREKSKLEEFTNDFAKELLEYRKIQKD
RRRSYSRSKSPYRDSSYSGSSYSYSKSRSRSRTPRSYSRSVSRSRSRSRSRSFSRSPYSR
RGRGRSRSYRSRSRSPAYHRSRSRSPSYRGRELSGIGGAMYRSRSRTPPFRNYSPSKKIP
PPSQIEGERKYNSRYREIPPYEPKAYYGRSVDQSDPYERERYRAWEREYRDWYDKYLKSY
NSPPGSHRGRGAGSREPHTPERYPPPRPRENSPYSRGRREEYPPPPQSHSGPPRGRGPMT
YQEKCAEKFGHLHANTSGPSRGPKESLKPLKDREASGSTATDSKSLKHKKHRKKKRDDGD
PFSHSDSMDETRKDERKGDSMLMNSSRDDATPVRDEPMDNAGVPYKSTPEKEKKEKSKSK
TDKVKRKSESSGGKKEMPGKVTKPVKDKEADALREKVAPAEPAIKRVKDEPSSHKSEASK
PQTVDSKLMLPRKLMQSRPIKHHQELKPIKDDLKNRKEFVKEPLKQDKVPIKDVKVKKEP
EKPVRTDEKISTKAVDSKQDKKMTKRKDEKSSMKDLDAPPIKIAKMEVEVAKGSPKPKPR
PESERPAMENKPSIPSLLDIKPEPVRKIKINREIGKRIPSTDRPFSPEDITHTTAKGRVD
KSRGKLRRKVHAPDGSGSVLVDYTSTSSTGGSPIRKHEDKLDLKKTVVKTLEEYTNDSST
PAEDEIVMIQVPRSKWEKEDYESEDDESKGTNRTRSVRPPSSAPVEETTAAKSTDKESPN
ADKTPSASKDSQMSDVKSAKDSTSSDKEKDTDKEKDRERDRGKEKDHSAAEREATDKRKP
NQERERPQERSSEHGSERSSSQSSRDRQADRSESTSRKPAGRETTTGPGNRKPDHREDAR
DHLATRSKDEREPIRRRVSPSPPSRVKDMHADSGRKANEVSQESQSPTKDKRISSQNAPE
SKRTGVEDHKADWSLSKESSRHSDMRPAKDREHRTPHRTLTPEPRTEAEKGASHGDHKVP
SMRTTRLSSDLARETDEAAFVPDYSESDSEISDLDNKTDQRGRDRDSSGSHSPSPSGSHG
HSSSPSSPGSQDSKKKKKDKKEKKEKKKHKKHKKHKKHKKHTSNESESELKGQKHKHKKK
KSKKSKDKDKDEKEESEDQRAKVSV
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattataagttttcttctaaacttaactacgacacggtcacctttgat
ggccttcacatcacgcttagtgatttgaaacggcagatcatgggccgagaaaagctgaag
gccgcggactgcgacctgcaaataaccaacgcgcaaactaaagaagaatacaccgatgat
gcggcccttatacccaaaaactcatctgtcatcatcagacgaatacctataggaggggtt
aagtcgacaagcaaaacatatctcattgatcgatctgaacaatcaagtggatcttcaaaa
gcaattgatgattcttcatccatttcactggctctgctttcaaagacagccaatcttgct
gaaacaaacgcgtcagaggaagacaaaattaaagcaatgatgtctcagtccaaccatgaa
tatgatcccatcaattatgcaaagaagcttgttggtccacccccaccgaactacacatgc
tttcgttgtggaaaaactggacattatatcaggaactgcccaacgaatgggcaggaccga
agttttgaagctcctcaacgtataaagaaaagcactggaattcctcgcagtttcatggtg
gaggttgatgatccaaaccggaagggtgtcatgctgaccaacagtggaatatatgccatt
cccactatcgatgctgaggcctatgctattggaaagaaagagaaaccacccttcttgccc
cagaatcagtcttcatcttcagaagaagaggatccagtgcctgatgagctactttgtctg
atctgcaaggatcttatgactgatgccgtcgttattccctgctgtggaaatagctactgt
gatgagtgtatccggacgtgtttgctagagtcagacgaacatgtttgccccacctgcaaa
cagtcggatgtgtctcctgatgctttgatagcaaacaagtttttgcgccaagcagtgaat
aattttaggaacgaaactggatacaccaaaagaattcgcaaggctgctgccgctgctcaa
tcggccacatcaggatcccagactcaggctcctttgcagcgaccacctatgagacgccaa
caggaccctctgatggccaatgttcccagctcgacagctgccagcacccctcctcaaagc
atgccggctgctgccttgtctcccgctgccactccccagccctccagcactccaccacct
gccagcagctctagcacacagagcagcaatgcaccttcagggccagacaacagccccacc
gtgaactcaccccagcacagtaccaagcaggatgacccgcctttgtctaaggaatctgaa
gttccagcatctgctcctgtgccttcatcagaggcctctgctccaacaaatattgcttcg
aagggattccatgtcccagtaattgggcagcctaatgtaccacagcacgtcatgcacaga
acaggacagcccaggcctagtggaccaaggcctacccagagtcgtcctaactgggaccaa
tccacaagtagagggagacctcctattgatcgaccacccagaacacaacctctgccattg
caaaaccttcctcccgtgccatgtccagggggtcctatgttcatgcctcctgcgctcttt
ccacctcctccacaccccatgcctcagccacctggtgttattcctccgcagtatcccatg
gcttttcctccaggacagcagcctccccctccattcaacttaccaccaccagtctatcct
ccagtcccacccaatgttcaagttccctgggtgcctcctggcactcagccacccatagcc
aaccctatctccagtatgccagcagaacctttcctctccaaggaggaattctacaggcag
cagcgcagactgaaggaagattcccaatgtcgattcgttgccagggagaagtcaaaactt
gaggaatttaccaacgattttgccaaagagcttttagagtacagaaaaattcagaaggat
agaaggcggtcctactcgagatcaaaatctccatacagggactcctcgtacagtggctca
tcatattcctattcaaaatctcgctcacggtcccgaacaccacgatcatactctcgctca
gtatcccgctctagatcacgctccagatcacgctctttttctcgttcgccatattcccgc
agaggccgaggtcggagtcggagttatcgatccaggtcacgcagtcctgcctatcatcgc
tcccgcagcagatcaccatcgtatcgaggtcgagaattgagtgggataggtggtgcaatg
tatcgttctcgttcccggaccccaccgtttaggaactatagtccaagcaagaaaatccca
cctccttctcagattgagggtgagcgcaaatacaacagcaggtacagggagattccacca
tatgaacctaaagcttattatggacgaagcgttgatcaaagtgatccctacgagagagaa
cgctaccgagcgtgggaaagagagtatagggattggtacgacaaatacctcaagagctac
aacagcccaccaggcagtcatcgaggccgtggtgcaggcagtagagaaccccatacgcct
gagcgatatccccctccccgtccgagagaaaactccccctacagcaggggacgaagggag
gaatatccgccaccgcctcaaagccacagtggccctccgagaggcagaggtccaatgacc
taccaggaaaagtgtgcagagaagtttggccacctccatgccaacacttctggacccagt
agaggacctaaagaatctctgaagccacttaaagaccgagaggccagtggcagcactgcc
acagactcaaagtctttgaaacataagaaacatcgcaagaaaaagagggacgacggtgac
cccttcagccactcggactcaatggatgaaaccaggaaagatgagcgtaaaggagactcc
atgttaatgaattcaagccgtgatgatgccacgcccgtcagggatgagccaatggacaat
gctggagtgccttacaagagcacccctgagaaagagaagaaagaaaagtccaaaagcaag
actgacaaagttaaacgaaagtctgaaagcagtggaggaaaaaaagaaatgcctggaaag
gtgacaaagcctgtgaaagataaagaggcggatgcactgcgagaaaaggtggctcccgct
gaacccgccattaagagagtaaaagatgaaccatcatcacataaatcagaagcaagtaag
cctcagacagtagactcaaaactcatgctcccccgtaagctcatgcagtccaggcccatc
aaacaccatcaagagctgaagcccatcaaagatgatcttaaaaacagaaaagaattcgta
aaagagcctttaaagcaagacaaagttcccatcaaagatgttaaagtcaagaaagagcca
gagaagcctgtgagaactgatgagaaaatttctaccaaggcggttgattccaagcaggat
aaaaagatgacgaagcgaaaagatgaaaagtcatctatgaaagacctagacgcccctcca
ataaaaatagcaaaaatggaagttgaagtggctaaaggctcaccaaaacctaaacccagg
cctgagagtgaaagaccagccatggagaacaaaccttccattccgtcccttttggatatt
aaaccagagcctgtgagaaagattaaaataaaccgagaaattggcaaaagaatacctagc
accgatcgtcctttttcaccagaggacatcacacatactacagcaaagggaagggtagac
aagtcaaggggaaaattgaggaggaaggtacatgcgccagatgggtcggggtctgtactt
gttgattacaccagtaccagctccacaggcggaagccccatcagaaagcatgaggacaag
cttgacctgaagaaaactgtggtgaagaccctggaggaatacacgaatgacagctctact
cctgctgaggatgaaatcgtcatgatccaggtgccccgctccaaatgggagaaagaagac
tatgaatctgaagatgatgaatctaagggcaccaacagaactcgaagtgtccgcccaccc
agctctgctcctgtggaagaaaccactgcagcgaaatcaacagacaaagagtctcccaat
gctgacaaaactccgtctgcctccaaagacagtcagatgtcagatgtcaagtctgctaag
gactccacatcaagcgataaggagaaagatactgacaaagagaaggacagagaacgagac
agagggaaagaaaaggatcacagcgctgccgaacgtgaagcgactgataaaaggaaacca
aatcaggagagagagcggccacaagagaggagcagcgagcacggcagcgagcggagctct
tctcagtcctccagggacagacaagctgacaggtctgaatcaacctctagaaagccagca
ggtagggagacaactacaggccctggcaacagaaaaccagaccatagggaagatgcaaga
gaccacttagcaaccagatcgaaagatgagagagaaccgattagaagaagagtgtcaccc
tccccgccctcaagggtaaaagacatgcatgcggattctggaagaaaggctaatgaagtt
tctcaggagtctcaaagtccaactaaggataagagaatctcatcccagaatgccccagag
agcaaaagaacaggggtagaggaccacaaagcagactggtctcttagtaaggagagctct
aggcattctgatatgcgtcccgcaaaggacagggagcacaggactcctcatagaacttta
actccagagcctaggacggaggcagagaaaggtgcttcacacggggaccacaaagtccca
tccatgcgcaccacccgactgtcttcggatttagcgcgggaaaccgatgaggctgcattt
gtaccagactacagcgaaagtgacagcgaaatctcggacttggataacaaaactgaccaa
agggggcgagacagagacagtagtggcagccacagcccaagtccttctggcagccacgga
cacagcagcagccccagctctccaggcagtcaggatagcaaaaagaagaaaaaggacaaa
aaagagaaaaaagagaagaaaaaacacaagaagcacaagaaacacaaaaagcataagaag
catacaagtaatgaatctgaatctgaactcaagggacagaaacacaaacataagaaaaag
aagtctaaaaagagtaaagataaagataaagatgagaaggaggagagtgaggatcagagg
gcaaaagtatctgtttaa
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