Triplophysa dalaica: 130425687
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Entry
130425687 CDS
T09616
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130425687 (helz)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
130425687 (helz)
3'-5' decay
Other 3'-5' decay factors
130425687 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
AAA_30
UvrD-helicase
ResIII
PAM2
zf_CCCH_4
Mov-10_helical
PhoH
AAA_22
AAA_16
zf-CCCH_4
AAA_7
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
130425687
NCBI-ProteinID:
XP_056608008
LinkDB
All DBs
Position
7:complement(21714164..21764763)
Genome browser
AA seq
1909 aa
AA seq
DB search
MEDRRPQKSCDEAIGSLVRQEYEAAVAHSTDALLALGPRTPTSGTALLYKRALLYRIAAR
LQLKDYDQADEDCKHVFAEDLGAGEGSFRAGLQNLLLDGSLQEVCSVLSKALYGEPLNGI
MTKDMTRLKRLLSEIESFSQSQGVRSKMASEMPVETEEDVEEGWKFRPPPRGVTSSEEYT
LCKRFLEQGLCRYGAQCTSAHSQEELTEWQQRYASRLIRLKQQQDGKHFTENYMEALIEK
WINSLTPERVMNDCVDGVTVNHSSDLSITVNSKKSSHSWTFNLFCKPVRTLHRIALLYDA
NRPHFSIAAVSAGDASTQVPQEVAEGGCQEWSAAGLVQNGMDHCVYTVVVSFTTEIFGTF
RQTVVFDFGSEPVLMHRVMVDAACIEDLEHLMQARQQLLMTAKRWDSLCKTIVEFVPNEN
MELERSLLTRYQIPLSADQLFTQSVMDKTLTRENYQSRFHDLLYIEEIAQYKEVSKFNIK
VNLQLVNSFMLTGISGGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVHSVLLLPVFK
ERMGQNQPSGAKERVYEAVIEEKTKDYIFLRVCKNCCEELGLVADQEMQVELQFQLNRLP
LCEMHYALDRIRDNSILFPDVSLTPTIPWSPNSQRVRSRAPCFRRQWDEQLDPRLNTKQK
EAILAITTPLSISLPPVLIIGPYGTGKTFTLAQAVKHILKQPDTRVLICTHSNSAADLYI
KDYLHPYVEAGNPHARPLRVYFRNRWVKTVHPLVQQYCLISGAYFTFQMPTRQDVERHRV
VVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALATKSTRVVLAGDHMQLS
PFVYSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSELFYDGKLMA
SGKQPPHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDE
GSIGVVSPYADQVFRIRAELRKKRMPEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQT
AIKRKEQLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWETF
ISICHENQSLHGITFEQIKIQLEALELKKTYVLNPLAPEFIPRALRSHHLQGPGKHQHSP
PKAKVQLANHTEPFPPEGFVQPSSAVLMGNSIQAFTPPGAGAPTSGKSPSPVQRIDPGAS
ILYVPAVYGGNVVMPMPLPVSSGQIPLPWPGYQSRFAMDPRIMSHQAAMAAYLRPAANRT
SPVLYGFGHPSPLGLNQQANTDKELLQEPSGNGKMDINGKAENCRLLTPERKAPELKGKQ
GDPESAQNKSPEPQSSVGFPASRLVRKDPQTQRALNFHLGPPHPAFPSHHPNNQFPQQYG
LSRAPLRMQTPIHPQPSSFPPSFFGGPPMAHRGLQSPVMEGLKGEGSMGAIPGGVSEDLK
GVVRGLPPQTHQQPLRLNSFGEESLDSLLGDTLDGQVSSGLDALGQHQHHARVGQWGEHT
PFMQPAVPPFPLPQQLAHLGQPGVRLPQQLLRAGWGLGPSAEEEQRPAMARYPSLLREML
PQEHYEQREPAEMPPPQSRLLQYRQVQPRSPGDLPSPSSSNAPNHSSFSAPPSYPDTSRE
LPMGGQPFQQHQAFNQASFSMPPEHTAGPLPVKYLLQEAHWPHPSLPQSHVLGHGLPYGL
QAMAHRQEQGPLTQVQHQQQKQQLQAPQSNLHSVEEYEPRGPGRPLYQRRISSSSPQPYP
DSLDPQDHPTPSYRYPTADLWLGNSGPGPGSAPLHNIPCNGASHLVPHRDVLVSKAMSVA
DEHVKPERLPQSPHPASTAALQHHGQFPPLMPSKQTPPDPGGGNTSPGGPQRPGNSKPPT
MSYASALRAPPKPRPVPEQVKKNSDPISLLQELSIGSSNSSNGYYTYFK
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggaggccacaaaagtcatgtgacgaggccatcggatcattagtgaggcag
gagtatgaggcggcagtggcccacagcacagatgccctgctggctttggggcccaggacc
ccgacctccggcacggccctcctttacaagcgtgcgctgctctaccgtatagcagctcga
ctgcagctgaaggactacgaccaggctgatgaagactgcaagcatgtgtttgctgaggac
ctgggggcaggagaaggcagttttagggcggggcttcagaacctgctgctggacggaagc
ttacaggaagtgtgcagtgttctctctaaagcgctctatggagaaccgctgaatggcatc
atgactaaagacatgacacgactgaagaggctgctctcagagatagagagcttttctcaa
tcgcagggcgtgaggagtaaaatggcatcagagatgcctgtagagactgaggaggatgtt
gaggagggctggaagtttcgtcctcctccaagaggagtcaccagcagtgaagagtacacg
ctgtgtaaaaggtttttggagcagggtctgtgtcggtacggggctcagtgcacatcggct
cactcgcaggaggagctgacggagtggcagcagcgttacgcctctcgactcatccgcctc
aaacagcagcaagacgggaaacatttcacagagaactacatggaggcgctcattgagaaa
tggatcaactccctcacgccagagagagtgatgaatgactgtgtggacggggttactgtg
aaccacagctcagacctctcaattactgtcaacagcaagaaatcatctcactcctggacg
ttcaacctcttctgcaagccggttcgtacactacaccgcatcgctctgctttatgacgcc
aatcgacctcacttctccattgcggcagtctcggccggggacgcgtccacccaggtgccc
caggaggtggctgaggggggctgtcaggagtggagcgcagccggcctggtgcagaacggc
atggaccactgcgtgtacaccgtggtggtctccttcaccacggagatcttcggtacgttt
cggcagaccgtggtgtttgatttcggatcggaacccgtgctcatgcatcgagtgatggtg
gacgctgcctgcattgaagatctggagcatctgatgcaagcgcggcagcagcttctgatg
acggccaagcgctgggactcgttgtgtaaaaccattgttgagtttgtcccgaatgagaac
atggagcttgaacgcagtcttctgacccgatatcagatcccgctatctgccgatcagctc
ttcacccagtctgtcatggacaaaaccctcaccagagaaaactatcagtcccgcttccac
gacctgctctacatcgaggagatcgctcagtataaagaagtcagcaaattcaacatcaaa
gtaaacctgcagctggtgaacagctttatgttgactggcatttctggcggtgcgaagtac
gctcagaacggacaactgtttgcacgctttaaactgacagagacattgtctgaagacact
ctggccggcagacttgtcatgacaaaggtccactccgtcctgctcctgcctgtctttaag
gagcgaatgggtcagaaccagccgtcaggagccaaggagcgtgtgtacgaggccgtgatc
gaggaaaagacaaaagactacatctttctacgggtctgtaagaactgctgtgaggagctg
ggtcttgtcgcggatcaggagatgcaggtggagctgcagtttcagctgaacagacttcct
ctgtgtgagatgcactacgctctggatcgcatccgagataacagcatcctgttcccagat
gtcagcctcactcccacaattccctggagtcccaacagtcagcgtgtgcgttctcgtgct
ccgtgtttccgcaggcagtgggacgagcagctggatccccgtctgaacaccaaacagaaa
gaggctattctggccatcaccacccccctctccatcagcctccctccggtgctcatcatc
ggaccctacggcacgggcaagactttcacactggcccaggctgtcaaacacatcctcaaa
cagcccgacacacgagttttgatctgtacccattcaaacagtgctgcggatctctacatt
aaagattatcttcatccatacgtggaggccggcaatccacacgcacgacctctcagggtt
tacttcaggaaccgctgggtaaagacggtacacccgctggttcaacagtactgcctgatc
tccggcgcctacttcaccttccagatgcccacgagacaggacgtggagcgccaccgtgtg
gtggtggtgacgctcagcacgtcccagtacctctgccagcttgacctggagccagggatc
ttcacacatatcctgttggacgaggcagctcaagccatggagtgcgagaccatcatgcca
ctggcgctggccactaagagcacccgtgtggtgctggcaggagatcacatgcagctcagt
ccgtttgtgtacagcgagtttgcgcgtgagcggaatcttcacgtgtctctgctggaccgg
ctgtacgagcattacccctccgagtacccctgcaggatcctgctgtgtgaaaactaccgc
tctcatgaggcaatcatcaactatacgtctgagctcttctacgatggcaaactgatggcc
agcgggaaacagccgccccataaagacttctaccctctcaccttcttcaccgctcgcgga
gaggatgtgcaagagaagaacagcacggcttactacaacaatgctgaggtgtttgagata
gtcgagcgtgtggaggagatgaggaaaaagtggccggtggcttggggaaagttggacgag
gggagcatcggggtggtctcgccttacgctgaccaagtcttccgcatccgtgccgaactg
cgtaaaaagaggatgccagaggtcagcgtggagagagtgctcaacgtgcagggcaagcag
ttccgtgtgctattcctgagcaccgttcgcacccgccacacctgcaaacacaagcagacg
gccatcaagagaaaagagcaactggtggaggactccacagaagatctggactacggcttt
ctgtccaattacaagctgctcaacacagccatcacacgagcacagtccctggtggccgtg
gtgggagaccccatagcgctctgctcggtgggacgctgcagaaagttctgggagaccttc
atctccatatgtcatgaaaaccagagtctacacggcatcacttttgaacagattaagatc
cagctggaggccctggagctgaagaagacctatgtgctcaacccactggcgcccgagttc
atcccccgcgccctgcgctcgcaccatctacagggtcccggcaagcatcagcactcccca
ccaaaggcgaaagtacagttggccaatcacacggagccgttcccccctgaaggctttgtt
cagcccagttctgctgtgttgatgggaaattccattcaggcattcaccccgccgggggca
ggagctcccacctcgggtaaatcccccagtcctgtccagagaatcgaccctggagccagt
atcctatatgtgcctgctgtgtacgggggcaatgtggtcatgcccatgcctcttcctgta
agttcaggacaaattcctttgccgtggcccggctatcagagtcgctttgctatggatcct
cgcatcatgagtcatcaggctgccatggctgcgtacttgcgaccggcagccaatcgaacc
tcacctgtgctgtatggattcggtcatccgtctcctctgggcctaaaccagcaggccaac
actgataaagagcttctacaggagcccagcggcaacgggaaaatggatattaatggaaaa
gcggagaattgcaggctgctgacacctgagaggaaagcccctgagctgaaaggaaaacag
ggagacccggagtcggcgcagaacaagagtcccgagccccagtccagtgtgggcttccct
gccagccgtctcgtgcgcaaagacccacagacccagagggccctaaacttccatctgggg
cccccgcatcccgctttcccctctcatcacccgaacaaccagttcccacagcagtacgga
ctttccagagcccctctccgtatgcagacccccatccatccccagccctcctctttcccc
ccttcattcttcggcggacctccgatggcacaccgtggacttcagtcaccagtcatggag
ggtttgaagggcgagggctcgatgggagccattccaggaggtgtctctgaggatctgaag
ggtgtggtgagaggtctgcctccacagacacaccagcagcctctgcgtctcaacagcttc
ggagaggagagtttagactctctgctgggtgatactctggacggtcaggtatcctcaggg
ctggatgctctgggccagcatcagcatcatgctcgtgtgggtcagtggggtgaacacacc
cccttcatgcagcctgcagtccctcccttccctctgccacagcagttggctcatctcggc
cagccgggtgtgcggctcccccagcagcttctccgagccggctggggcctcggaccatct
gcggaagaagagcaaagacctgccatggccagatatcccagtctgttgcgcgagatgctc
ccccaggagcattatgagcagcgcgagccggccgaaatgccccctccgcagtctcgtctc
cttcagtatcgtcaagtccagccccgaagccccggggacctgccctcgccctcctcatcc
aacgctcccaaccacagctcattctccgctccgccctcatacccagacaccagccgagag
ctgcccatgggcggccagcccttccaacagcaccaggccttcaaccaggcatccttctcc
atgccacccgagcacacagcgggtcctcttccggtgaagtacctcctccaggaggcccac
tggcctcaccccagtctgccccagagccatgtgctgggccacggcttgccctacggtctg
caggcgatggcacacagacaggagcagggcccgctcacgcaggtccaacaccagcagcag
aaacagcagctccaggccccgcagagcaacctgcacagtgtagaagagtatgaaccacgg
ggtcccgggcggcctctgtaccagagaagaatctcctccagctccccccagccgtatccg
gatagcctggaccctcaggaccaccccacaccctcctacagataccccacagcagattta
tggctaggcaacagcggtcccggcccgggctctgctcctctccacaacattccatgtaac
ggagcgagccacctcgtcccccacagggatgttttagtttcaaaggcaatgagcgtcgca
gatgaacacgtcaagcccgagcgtctcccgcagtcacctcaccccgctagcaccgcagcc
ctccagcaccacggacagttcccacccctcatgcccagcaaacaaaccccgccagatcca
ggagggggcaacaccagtcccgggggcccgcagaggccaggcaactccaagccccccacc
atgtcctatgccagcgccctccgagcccctccaaagccccgcccggtgcccgagcaggtc
aagaagaacagcgaccccatctctctgttacaggaacttagcataggcagttcaaacagt
agcaatggctattacacgtattttaaataa
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