Triplophysa dalaica: 130425703
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Entry
130425703 CDS
T09616
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130425703 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130425703 (hdac5)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130425703 (hdac5)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130425703 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
130425703
NCBI-ProteinID:
XP_056608044
LinkDB
All DBs
Position
7:complement(7784050..7844417)
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AA seq
1130 aa
AA seq
DB search
MLLKPTVPGLCAMLQTIYETESCFSSDTTSSREQPVELLPQSRSTSMPSTAVDVKTLLPS
GMQSPVGGGGDQSGGSGGPVDLRTDPRLNALSTVDPTLREKQLQHELLLLKQQQELQKQL
LFAEFQKQHEVLTRQHEVQLQEHLKQQQEILAAKRQQELEQKRKLELQRHEELEKQRLEQ
QLIMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGPGGLNHSFPQKCWGAHHTSLEQSS
PPQSNTPGTPPSYKLPSLLGAYEGKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRR
KDGTVISTFKKRAIDISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPNIHAEQLRSL
HQSLTGDGTPSPLSLYTSPSLPNISLGLPANAHITAPQKFSGQQEAERQTIQSLRQSVAL
TGKFISTSSLPACLPPAGAPHDSEAPSAPNSHSSHSSLLQHVLLLEQARQQSALLAVPMY
GQSPLVTGERVSNSMRTVNKLPRHRPLSRTQSAPLPQTPQALQHLVMQQQHQHFLEKQKH
YQLNKILSKGVELPRQPPTHPEETEEELTETAEMQEERGEGPDHVREGLQNESSGESTPP
SERLVPLKGESTESDLEEDDDEDEAIELRECDEEGAPYGQYLDQHVQQLNVFQASLSITG
MPHRPLGRAQSSPVTSSLKGAPLTEPPIKHLFTTGLVYDTFMLKHQCMCGNTHIHPEHAG
RIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLG
PISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVASGELKNGFAVVRP
PGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYNDPNVLY
ISLHRYDDGNFFPGSGAPEEVGAGPGVGFNVNIAWTGGVEPPMGDVEYLTAFRTVVMPIA
NEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLT
AICDASESCVAALLGDELDPLPLTVLQQKPCPKAAASLERVIEIQSTHWTSLQRLAPTVG
QSLLEAQRREKDEADTLTAMASLTVDNDHITSTETSSRSAEEPMEEEPVL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgaagccaaccgtaccgggactgtgcgcgatgttgcagacgatctatgagaca
gaatcctgcttctcttcagacaccacgtccagccgagagcaacccgtggagctgctacct
cagtccagaagcaccagcatgcctagtaccgccgtggatgtgaagaccttgctgccctct
gggatgcagagcccggtaggaggtggtggagatcagagcggaggtagcggaggaccggtg
gacctgcgtacggaccctcgtctgaacgctctgagcacggtggacccgacgctgagggaa
aaacagcttcaacacgagctcctcttgctcaaacagcagcaggagctccagaaacagcta
ctgttcgcagagttccagaaacagcatgaggttttgacgcgccaacatgaagtgcagcta
caggaacatctgaagcagcagcaggagatcctcgcagccaagcgtcaacaggagctggag
cagaagaggaagctggagctgcagcgtcacgaagagttggagaaacagagattggaacag
cagctcataatgctacgaaacaaggaaaagggcaaagagagcgccatagccagcactgag
gtcaaactgaagctgcaagagttcctgctgagcaaaaaggaacccggtcctggtggactc
aaccattcctttcctcagaagtgctggggggctcaccatacgtccctggagcagagctct
cctccgcagagcaacacaccaggaacacccccctcctacaaactcccctcactgctggga
gcctacgagggcaaggatgactttcctctgcgtaagaccgcttctgagcccaatctgaag
gtacgttcacggttaaaacagaaagtggccgagaggagaagcagtccactgctcaggcgg
aaagatgggaccgtgatcagcaccttcaaaaaaagagcgatcgacatctcagtgtcctcg
atgtgcagcagcgctcctggctcgggacccagttctccaaacagctctaacagtgccatc
gctgagaacggttcgagtggctctgtcccaaacatccacgctgagcagttgcgttctctc
catcagtctttgactggagatgggacaccgagccccctgagcctctacacctccccatct
ctgcccaacatctctctgggacttcctgccaacgcacacatcacagctcctcagaagttc
agtggccagcaggaagcagagcggcagaccatccagagcttgcgtcaaagtgtggcattg
accggcaagttcatcagcacatcgtccctgccggcgtgccttccgcccgcgggtgcgccc
cacgattccgaagctccttcggcccctaacagccacagtagccattcctcgctgctccag
catgttctgcttttggagcaggctcgccaacaaagcgcgcttctcgctgttcccatgtac
ggacagtctccgctggtgaccggcgagcgggtttccaacagcatgcgcacagttaataag
ctgcctaggcaccggccactgagccgcacgcagtcggcgcctctaccgcaaactccgcag
gccctgcaacacctcgtcatgcaacagcaacaccagcacttcctagagaaacagaagcac
taccagctcaataagatcctctccaaaggggtggagcttccacgacagcctcccactcac
ccagaagagacggaggaggagctcacagaaactgcagagatgcaggaggagcgcggggag
gggcccgatcacgttagggaggggctacaaaacgaaagctccggtgagagcacgccccct
tcggaaagactggtcccgttaaagggagaaagcacagaaagtgatttagaggaagatgac
gatgaagacgaagcaattgaactaagggaatgcgatgaagagggcgccccctatggccag
tatttggaccagcatgtgcagcaactgaatgtgttccaggcatctctgtcgatcacagga
atgccccacagacccctaggaagggcacagtcatcccctgtcacttctagtcttaaagga
gcgccccttaccgagccgcccatcaaacatctcttcacgacaggtctggtatatgataca
ttcatgctcaagcatcagtgcatgtgtgggaacacacatatccaccccgagcacgctggg
cgcattcagagcgtttggtccaggctacaggaaacaggcctgctgggtcgctgtgagagg
atccgcggaagaaaggccacgctagatgaaatccaaacagtgcattctgagtaccatacg
cttctctacggcaccagccccctgaacagacaaaagctggacagcaagaagcttttaggt
ccaataagtcagaaaatgtatgcggtgctgccgtgcggaggcatcggggtggatagtgac
acagtgtggaatgagatgcactcgtctggtgccgtgcgaatggctgtgggctgcgtcatc
gagctggcgtttaaagtcgcttctggagagctgaagaacggttttgcagtggtccgtcct
cctggtcaccatgctgaagaatccaccgccatgggtttctgcttctttaactccgtggcc
atcactgccaaactcctacagcagaaacttggagtgggcaagatccttattgtagactgg
gatattcaccatggaaacgggactcaacaggctttctataatgaccctaatgtgctatac
atttcactacatcgctacgacgatggcaactttttcccaggcagcggcgctcctgaggag
gtgggtgcgggcccaggagttggctttaatgtcaacattgcctggacaggcggagtggag
ccacctatgggtgatgtagagtatctcacagcattcaggactgtggtgatgcctatagcc
aacgagttttcccccgatgtggtgctggtgtctgcaggcttcgatgccgtcgagggccac
cagtcgcctctgggtggatacaacgtcaccgctaaatgtttcggccatctaactaagcag
ctgatgaagctggccggcggccgcgtggttctggcgctggagggaggtcacgacctcact
gccatctgtgacgcatccgaatcctgtgtggccgcgttgctaggagatgagttggatcct
ttaccactaacagtacttcaacagaaaccgtgtccgaaagctgcagcctctttagagaga
gtcattgagatccagagtacgcattggacatctcttcagaggttggctcctacagtgggt
cagtctttattggaggctcagaggagagagaaggatgaggcggatactttgacagccatg
gcctctctcactgtggacaacgatcacatcacctccacagaaacgagcagcagatcagcg
gaagagccaatggaggaagaacctgtattgtag
DBGET
integrated database retrieval system
