Triplophysa dalaica: 130425721
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Entry
130425721 CDS
T09616
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03030
DNA replication
tdw03410
Base excision repair
tdw03420
Nucleotide excision repair
tdw03430
Mismatch repair
tdw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130425721 (pold1)
03410 Base excision repair
130425721 (pold1)
03420 Nucleotide excision repair
130425721 (pold1)
03430 Mismatch repair
130425721 (pold1)
03440 Homologous recombination
130425721 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdw03032
]
130425721 (pold1)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130425721 (pold1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130425721 (pold1)
DNA replication proteins [BR:
tdw03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
130425721 (pold1)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
130425721 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
130425721 (pold1)
BRITE hierarchy
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
130425721
NCBI-ProteinID:
XP_056608069
EnsemblRapid:
ENSTDLG00000012058
LinkDB
All DBs
Position
7:complement(9621757..9634217)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPAMGGASQAKKGKVSTEWEDSPSQFEEELALLDEMEMEVESEEGQAGHDVT
PVGDLFSADLNPRWKRPQAPTLQPNSDRLIFQQIDLEYYLGSAVAGMPGQVQGKVPIVRM
FGVTDSGNSVCCHIHGFAPYFYVPAPNGFTNAHLAEFKRELNSAVLKDMRSNKDNIAITV
LAVDITIKESMFHYRGNRPHDFLRITMAIPRLIAPAKRILEQGFKFANFATQSYHGFEAN
IDFEIRFMVDTDVVGCCWIELPKGKYKVREEKSEGQTNSQYPGKMSLCQYEVDVAWNDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGVFPEPEVDPVIQIASMVQRQGEKEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFVRTVDPDIITGYNIQNFDFPYLLNRAATLKVN
LFPYLGRVRGIKSVLRDSSFQSKQMGRRENKTVNIEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEVGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGQIEKLGLGPEDFIKTPTGDLFVKSSVRKGLL
PEILENLLGARKKAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEKTKQLVESSYTIAKGYQADAKVIYGDTDSVMVKLGVATVQEAMNLGK
EAAEWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSSAEQHDKMDCKGIETVRRDN
CPLVANLINTCLQNILIDRDPDGAVSHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMKKRDAGSAPQLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCR
AVLKTDVAVCDFCKKKESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDHSKLISRFAW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaaacgtcgaaatgggggccctgcgatgggcggggcttcacaagccaaaaaa
ggaaaagtgagcactgaatgggaggatagtccctcccagtttgaggaggaacttgcttta
ttagatgaaatggagatggaggttgagtcagaggaggggcaggcaggtcatgatgtcacg
ccagtgggtgatttattctctgctgatcttaatccacgttggaaacgacctcaggcacct
actcttcagccgaattcagacagactcatcttccaacagatagacctggagtattacctt
ggatctgcagtagcaggtatgccggggcaggttcaaggaaaagtcccaatagtgcgcatg
tttggtgtgacagacagtgggaacagtgtgtgctgtcatattcatggatttgccccatac
ttctatgttcctgcaccaaacggttttacaaatgcgcacttggctgagtttaagagagaa
ctgaactctgctgtgctgaaagacatgcggtccaacaaagacaacatagccatcactgtg
ttggcagtggacatcaccattaaagagagtatgttccattaccgtggaaaccgccctcat
gactttctgcgcatcaccatggcgataccgcgactgatcgcgccggcgaagcgaatcctg
gagcagggctttaaatttgccaactttgccactcagagctaccacggctttgaggccaac
atcgactttgagatcaggttcatggtggacactgatgtggttggctgctgctggattgag
cttcctaaaggaaagtacaaagtgagagaagagaaatctgaaggtcagacaaactcgcag
tatccagggaagatgtctctgtgtcagtatgaagtggacgtggcgtggaatgatctgatc
agtcatccagctgaaggagattggcagaggatcgctcctctaagagtgctcagttttgac
atcgagtgtgcaggcaggaaaggtgtgtttcctgagccagaggtcgacccagtgattcag
atcgcctcaatggtgcagcgtcagggagagaaggagccgtttatccggactgttttcact
ttacagagctgcgccagtatagtgggctctcagattctctgtttcactcaggaaaaacag
ctactgcagagctgggcagagtttgtgaggacggtggatcctgacatcatcactggctac
aatattcagaacttcgattttccataccttcttaatagagctgcaactttaaaggtcaat
ttatttccatatttgggtcgtgtgcgaggcattaagtcggttttaagagattccagtttt
cagagcaagcagatgggtcgccgagagaacaaaactgtcaatatagagggacgtgtgcag
tttgaccttctgcaggtgttgctgagggattataaacttcgttcttacacacttaacgcc
gtcagtttccattttctgcaagagcagaaggaggatgtgcagcattcaatcattacagac
ctacagaacgggaatgagcaaacccggaggcgtctggctgtatattgtctgaaggatgcg
tacttgccgctgcgtttactgcaaaagttaatgtgcgtcattaactacatggaaatggcc
agagtaaccggagtgcccctgacttaccttctgtctcgtggacagcagattaaagtggtt
tcacagctcctcagacaggctatgaagcaggatctggtcatgccagtggtgaaaactgag
gttggagaggactacactggagccaccgtcatagagccagaaaaaggatattacagtgtt
cctatagcaactcttgatttctcctccctgtatccctccatcatgatggctcataatttg
tgttacactacacttctgcagaaaggtcaaattgagaaacttggtttggggcccgaagac
ttcattaagacccctacaggtgacctgtttgtgaagagctctgtgaggaagggtcttcta
cctgagatcctggaaaacctacttggtgccaggaaaaaggcgaaggcggagctaaaaaaa
gagacagatccctttaaaaagcaggtgctggatggaaggcagttggctttgaagataagt
gcgaactcggtgtatgggttcacaggggctcaggtgggcaaactgccctgccttgagatt
tcacagagtgtcacaggctttggtagacagatgattgaaaagaccaaacagctagtggag
tcatcatacacaattgctaaaggttaccaggcggatgcgaaggtcatttacggagacaca
gactctgtcatggtgaaactgggtgtggccacagtacaggaagcaatgaatctgggaaag
gaggcagctgagtgggtttcttcacacttcgtaccaccaattaaattggagtttgagaag
gtgtattacccctatctgttgatcaataagaagcggtacgcagggctgtatttctcttcc
agtgctgaacagcatgataaaatggattgtaaaggaatagagacagtccgacgagacaac
tgccctctagtggccaaccttataaacacatgcctccaaaacatccttattgacagagac
cccgatggagcagtgtctcatgctaaagaggtcatctctgacctcctgtgcaaccgtatc
gacatcagtcagctggtcataacgaaagagctcacacgtaccgcgcaggagtacgctggc
aaacaggctcatgtcgagctcgctgagagaatgaaaaagcgtgacgctggcagcgctcca
caactcggagacagggttccgtatgtcatcatcaaagcagcaaaaggggtggcagcttac
atgaaatcagaggacccaatttatgtgctggagaataacatccctatagacacgcagtac
tacttggaacagcagctgtctaaacctctactgcgtatctttgagcccatactgggcgag
agtaaagctgagagtgtgttactgaagggagatcacacacgatgtaagacagtcctgacg
tctagggtcggtggcctcatggcattcgctcagaagcgaagcacttgcattgggtgtaga
gctgtacttaaaaccgatgtggctgtttgtgacttctgcaaaaagaaagagtccgagctc
tatcagaaagagattgctcatctgtcaactttggaggagaagttctcccgtctatggact
cagtgtcagcgctgtcagggttcactacatgaagatgtgctttgtaccagtcgagactgt
cctatcttttacatgaggaagaaggtacagaaagatttggatgaccattcaaagctgatc
tctcgttttgcttggtga
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integrated database retrieval system
