Triplophysa dalaica: 130425726
Help
Entry
130425726 CDS
T09616
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130425726 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdw02000
]
130425726 (abca3b)
Transporters [BR:
tdw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130425726 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_22
AAA_23
SRP54
RsgA_GTPase
AAA_29
Cas6_I-A
Motif
Other DBs
NCBI-GeneID:
130425726
NCBI-ProteinID:
XP_056608078
LinkDB
All DBs
Position
7:complement(4367265..4393902)
Genome browser
AA seq
1705 aa
AA seq
DB search
MVVWQQLGLLLWKNYIHQKRQILVTVVEIALPLLFSAILIILRQKVSSTTYPNATHYHSF
SVNDLPGEVCFKDLAYVPANASVVRQIAVDVKESLKWCISSVRGFETEEQFEAFVKTDPH
SSGILAAVVFEHKFSHDDEPLPLQVAYHLRFSYSPRSAPPREKSDFDPNNDMDWHTLRLF
PLFQLPGPREQHDPRGGTPGYYREGFLQVQHAVDRAIMKSYNSTAASALLSQTHVRLSRF
PYPAFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHW
SAWFLMFFLFLSISIFFVTLLCCIKVSPNGAVLTYSDPTLVFVFLLVFAVSTINFCFMIS
VFFSKANVAAAAGGFIYFLSYLPYLFLWPRYDLLSQTQKVSACLISNVAMAMGTQLIGMF
EGKGTGIQWSNLFESVTVDDDFSMAQVIGLLLLDAVMYGLVAWYVEAVFPGEYGVPLPWY
FFILSSYWCSSPRMAFLKEKEEEEDAEKALKGEFIEEEPVGLVSGVKLKHLSKVFRVGKT
DKEAVRGLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMTLI
RRSLGLCPQHDVLFDNLTVREHLLFYTQLKGFPRQKIPDEVERIICILNLEDKRDARSKT
LSGGMRRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMD
EADLLGDRIAIMAGGELQCCGSSLFLKNKYGAGYHMVIVKDAFCNVSEITRLVHMYVPNA
TLESCAGAELSYILPKESTNRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVD
SSLDIQAIQLPALQYQHERRSHDWTTDDSSSVSGMTDVTDFTDSGTLISEDGSNIKLNTG
ARLYLQQFYAMFLKRALYSWRNWKVIVAQFLVPLIFIILALVVARTLPGGHSTAQLRLSL
SQYGPTHVPVALETDAGPLAEALAEVYTAQLASQNAIAATNITDLSDYVLYNAVREGGAF
NERCVVGAALGKSRSHTYMIGYFNNQGYHTPATALMLVDNALYKLLAGPNASIQMGNFPM
PRNMSESAQNQLSEGQTGFAIAINLMYGMASLASTFALLLVSERSVKSKHVQRVSGVYLS
NFWFSALLWDLINFLMPCLLMLVVFRAFSVEAFVAENHLVDVLLLLLLYGWAVIPLMYLL
SFLFSSAATAYTRLTIFNIISGTATFLAVIITSIPELHLQDISHILDKVFLLFPNYCLGM
SFCQFYQNYEVITFCTSSAMAEYVCKYYNVTFQLNYFSMEEPGVGRFLVAMSLQGVVFIG
LLLFMELQCIQTLLNLCRWRKKFMLEAEDALQSEDRDVAEERKRVLECQPVVESMVGSPL
ILQELSKVYSGGPSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESITSGDAF
IDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLNMYARLRGIPEKYVSACVENVLRS
LLLEPHADKLVRCYSGGNKRKLSAGIALIGGPPVIFLDEPSTGMDPVARRLLWDAITRTR
ESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHTEGDF
GEMDLQLFKDFVQNTFPGSLLKDEHQGMVHYHLTDKTLTWAQVFGVLETAKEKYRIEDYC
VSQISLEQVFLSFAQFQHCSDDRWK
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgtggcaacagctcggactgcttctctggaagaactacatccatcaaaagcgt
cagatcctggtcacggtggtggagatcgctctgcctctgctcttctcagccatcctgatc
atactacgtcagaaggtttcctccactacctaccctaatgcaacacactaccacagcttc
tccgtgaatgacctgccgggcgaggtctgcttcaaggacctggcgtacgtgccggccaat
gccagcgtggtgcgtcagatcgccgtggacgttaaggagagcttgaagtggtgcatcagt
tccgtccgtggctttgaaacggaggaacagttcgaggcgtttgtgaagacagacccacat
tcaagcggcattttggcagcggttgtcttcgagcacaaattcagccatgatgatgagcct
cttcccctgcaggttgcctatcatctacgcttctcgtacagccctcgaagtgctccgcct
cgtgagaaatccgactttgatccaaacaatgacatggactggcacaccctccgcctcttc
cctcttttccagcttccggggcccagggaacagcatgacccacgtgggggcaccccaggt
tattaccgcgagggcttcctgcaggtgcagcatgcggtggacagagccatcatgaagtcc
tataacagcacagcagcctcggccctccttagccaaactcacgtgcggctctcccgcttc
ccctacccggcgtttatctacgacgtcttcatcctggccatacagaaccagctgcccctg
ctcctcgtgttgagcttcacatacacgtctctgaacatcgtccgcgccgtggtgcaggag
aaagagaggaaactcaaggagtacatgcgcatgatgggtctcagtaactggctgcattgg
agcgcctggttcctcatgttcttcctcttcctgtccatctccatcttcttcgtcactctg
ctctgctgtatcaaggtgagtcctaacggagcagtgttgacgtatagtgacccgacgctg
gtgttcgtctttctgctggtgtttgctgtgtccaccatcaacttctgcttcatgatcagc
gtgttcttctccaaagcgaacgtggctgcagcagcgggtggcttcatctactttctcagc
tacctgccgtatctcttcctatggccccgctatgaccttctgtcacaaacccagaaagtc
tctgcctgcctcatctcaaatgttgccatggccatgggtacccagctgatcggcatgttt
gagggcaaagggacgggcatccagtggtctaacctgtttgagtcggtgactgtggatgat
gacttttctatggcacaggtgatcggactgcttctgctggacgctgtgatgtatggcctg
gtggcctggtatgtggaagcggtattccctggagagtacggagtccctctgccgtggtat
ttcttcattctgtcgtcatactggtgcagtagtcctcgcatggcctttctaaaagagaaa
gaggaggaggaagatgccgagaaggctctgaagggcgagtttatcgaggaagagccagtt
ggactggtgtcaggggtcaaactcaaacatttgtcaaaggtcttcagagtgggcaagaca
gacaaagaggcagtgagaggtcttacactcaatatgtatgaaggtcagatcacagtcctg
ctgggtcacaacggagctggaaagacaaccacactgtctatgctgacaggtctgtttccg
cccagcagtggccgtgcatacatcaacggttatgatatatgtcaggacatgactctgatc
cgtcgtagcctgggtttgtgtccacagcacgacgtgctcttcgacaatctaaccgtccga
gaacatctgctgttttacacgcagttaaagggtttccctcgccaaaagatcccagacgag
gttgagcgcatcatctgcattcttaacctggaagacaagcgggacgccaggtccaagacc
ctctcggggggaatgaggagaaagctttccatcggcatcgctctcatcggagactctaag
gtagtgatgctggacgagcccacctcgggtatggacccttctgcccgacgggccacctgg
gacctgctgcagggcgagaagcgcggccgcaccatcctgctcaccacgcacttcatggac
gaagctgatctgctcggagaccgtattgccatcatggccggcggagaactgcagtgctgc
ggctcgtcactctttctcaaaaacaaatacggtgccggttatcacatggtgatcgtcaaa
gacgcattttgtaacgtgtcggagatcacgcgtctggttcacatgtatgtgccaaacgcc
actctagagagctgtgccggagctgagctgtcctacatactgcctaaagagagcaccaac
cgttttgagctgctgtttgccgagctggagatgaatcgagaggagttgggcatcgccagc
tatggagcgtcggtcaccaccatggaggaagtttttctgagggtcggcaagctcgtggat
tccagtttggacattcaggccattcagcttcctgctcttcagtatcagcatgagcgcaga
tcacatgactggacgactgatgactccagcagtgttagcggtatgaccgacgtgacggat
ttcacagacagcggcactttaatttcagaagacggctccaacatcaaactcaacacaggg
gcccgactctacctgcagcagttctacgcaatgttcctgaagagggcgctgtacagctgg
aggaactggaaggtgatcgtggctcagtttttggtgccgctcattttcatcattttggcg
ctggtggtggcccgcactcttcccgggggccacagcactgctcagctccgcctgtctctg
tcacagtacggccctacacacgtgcccgtggctctcgagacagacgccggcccgctggcc
gaagccctggctgaggtctacaccgcacagctggcgtcccagaacgccatagcagcaact
aatataacagatctgtcagattatgtgctgtataatgctgtgagagagggcggcgctttc
aacgaacgctgtgtggtgggtgctgctctcggcaaatccaggagtcacacctatatgatc
ggatacttcaacaatcagggctatcacacccccgccacggccctcatgctggtggacaac
gctctttacaaactgctggctgggcccaacgcctccatccagatgggaaatttcccaatg
cccagaaacatgtccgaaagtgcccagaatcagctttcagagggtcagacaggtttcgcc
atcgctataaacctcatgtacggtatggcgtctttagccagcaccttcgctctgctcctt
gtgtcggagcgctctgtgaagtccaagcacgtgcagcgggtcagcggggtctatctctct
aacttctggttctccgctctgctctgggatctcatcaacttcctgatgccctgtctgcta
atgctggttgtgttccgagcgttttccgtggaagcgtttgtggcggagaaccacctggtg
gatgttctgctgttgttgctgttgtatgggtgggccgtgattcctctcatgtatctgctc
agctttctgttctcttcggccgccaccgcttacacgcgcctcaccatcttcaacatcatc
agcggcacggccacgttcctcgccgtcatcatcacgagcatacctgagcttcatctgcaa
gacatctctcacatcctggataaagtcttcctgctcttcccaaactactgcctgggaatg
tccttctgtcagttctaccagaactatgaagtcatcaccttctgcacctccagcgcaatg
gcggagtatgtctgcaagtattacaacgttacatttcaattgaactacttctccatggag
gagccgggcgtgggacgcttcctggtggccatgtcgctgcagggcgtggtcttcatcggc
cttctcctcttcatggagctccagtgcatccaaaccctcctgaacctctgcaggtggcgc
aagaagttcatgctggaggcagaagacgctcttcagtctgaagacagagacgtggccgag
gagaggaagagagttttggagtgtcagccggtggtggagtccatggtgggcagcccgctc
atcctgcaggagctcagtaaggtgtactcgggtggcccgtcgctgttggcagtggaccgc
ttatccctggccgtcgggaagggcgagtgtttcggcttgctggggtttaacggtgcgggg
aagaccacgacgttcaaaatgctgaccggtgacgaaagcataacatcaggagatgccttc
atcgatggttacagcatcctccgagacgtgaaaaaggttcaacagagaatcggctactgc
cctcagtttgacgctgtgttggatcacatgacgggacgggagaccctaaacatgtacgcc
agactgaggggcattccggagaagtacgtgtcggcctgcgtggaaaacgtcctgcgctcg
ctgctgctcgaacctcacgctgacaaactggtccgctgctacagcggtggtaataagagg
aagttgagcgcaggcatcgctctgatcggagggccgcctgtgatctttctggacgagccg
tcgacaggcatggaccccgtggccagacgtctgctgtgggacgcgataacacgcactcga
gagtcgggaaaagccatcattataacctcacacagtatggaggaatgcgaggcgttgtgt
acgcggctggccgtcatggtaaacggccagttcaagtgtctgggcagcccgcagcatctg
aagagcaaattcggaagcggttacacactgttggcaaaggttcacacggagggagatttt
ggagaaatggaccttcagctctttaaagactttgttcaaaacacttttccaggaagttta
ctgaaggacgaacatcagggaatggttcactaccacttaaccgataaaaccctcacctgg
gcacaggtgtttggagttctggaaacagccaaagagaagtatcgtatcgaggattactgc
gtcagtcagatctctctggagcaggtgtttctcagctttgctcagtttcagcattgctca
gacgaccgctggaaatga
DBGET
integrated database retrieval system
