Triplophysa dalaica: 130425741
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Entry
130425741 CDS
T09616
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tdw01001
]
130425741 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tdw04054
]
130425741 (ciita)
Enzymes [BR:
tdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130425741 (ciita)
Protein kinases [BR:
tdw01001
]
Serine/threonine kinases: Other
TAF1 family
130425741 (ciita)
Pattern recognition receptors [BR:
tdw04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130425741 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
AAA_22
nSTAND3
AAA_25
AAA_7
FtsK_SpoIIIE
nSTAND_NTPase5
DUF87
Motif
Other DBs
NCBI-GeneID:
130425741
NCBI-ProteinID:
XP_056608091
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All DBs
Position
7:complement(10425596..10440320)
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AA seq
1178 aa
AA seq
DB search
MSTSHSCDPVMVPFEDVLFQVRKALQVGPSLLYGLLEELHEARVFSTQFYLSLFKNGGQS
LGEILFKDEEDLARRLSLPIWQKWDVSQVILDSALNIEEDLSAFLNSPDAESQDMIDTLD
SGLDLLPDHLVSEIIDSILSEDYFEDILADPSILEDDFHFPCDTDTACTLTSENAAILDQ
NITKKRKGKDASKSNKTPTKRNRKATACLESPPNRCTPTIASEGNFHSFNSLQRVWHLSN
LPPITNNTAFESPSFLSPSGGSAFPIIQTSGSLSHPLISTVVPFRHTYVIVSPQPVSRVT
QILPVSPVDGTVAPPELTVAVLPVGTLSDSASKGLPSHPVDTFSPTKVDRSNTCVLADGK
PRKNTDSPPPKPAAEVRPEAPKCVKEFINLAKPHIRNVCNAMRGGLGMESHYIDVHLIPR
KLLIKSGKNANKCLEKELVVLSDSERKQSLLDRSQVFQNNLTRPKQSIAILGKTGVGKTV
MIQRLCLDWASGSLSQFQFVFLLDCKNLDLKKSNYSLKHLLFDLSVSPSCEESDTVFKHI
LSSPEDVLIIFDSFDDIKDFEGLLQAPAKSPKDTKYTVKQLFSGLFQKEILAGCTLLIAT
RPKEVLNQVLRKMDSLLELCHFSPEDIELYTTKYFRDSSLQEKALQKIKKKIYIFRICSN
PLLCWTTCFLLEHQDSNCEALPSTLTELYQKVTFKQLQLASREISSQDTQQLCKTAWEGY
KNHNTHIKIDESPELVKYYLKSGIIVSYAQQNHFEDLYIQNLLGALHSVQSKQVNEKMLL
AHSMVQQKKRKIQGESQDVMQSFVTGLLFQKARPDGVSILDGNVDVQAKRKAVETHLLNL
KLNELNPARLLELFHCVYETSNAKLARLLLKKLPDNLSFCGAQLCSSDVYVICHLLQHAT
TLKRTFSINLQETSIPISDLRELVELKCITSFWAHTGDTIALWEDLHDSNNELKLKGAIE
KFTLNPLKATQGHHIENLPLLVHIHRGKKLPRSDFVPALNEGVPALRHLQKLEFELGVQN
GPEMFPKLIEVLPSLQSLQHLDIEKNKIGDSGAEKLSGVLHFLASLKWLNLSQNCIGDAG
VEKLAKALASVPSLQSLSLYGNLIADNGAEELALVLPDMKLLQDLDVKFNKFTDIGAKKL
SAALKNCTGMKSLELWNNCIPWGVFEHLHHQDPRIRSL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctctcatagctgtgatccagtcatggttccttttgaggacgtgctgtttcag
gtgagaaaagctttgcaggtcggccctagcctcctgtatggactcctcgaggagctgcat
gaagccagagtcttctccacgcagttctacctgtctcttttcaagaatggagggcaaagt
ttgggcgaaatcctcttcaaagatgaagaggatctggccaggagactgtctttacctatt
tggcaaaaatgggacgtcagccaggtcatcttggattcggcattgaacattgaggaggat
ttaagtgcgtttctaaacagtcctgatgctgaatcgcaagatatgatagataccttagat
tcagggttggatctactacctgaccatcttgtttctgaaatcattgactccattctaagt
gaagactattttgaagacattttggcagatcccagtatccttgaagatgattttcatttt
ccatgtgacacagacacagcctgcacactgacatcagaaaatgctgctattttagaccaa
aatattactaaaaaacgaaaaggtaaagatgcatccaaatccaacaaaaccccaactaaa
cgcaacagaaaagcaacagcgtgccttgaaagtcccccaaacagatgtacgcccaccatt
gcctctgagggaaatttccactcattcaactctctccagcgtgtatggcatctctccaac
ctcccccccataaccaacaacactgcctttgaaagcccctcttttctatcccctagtggt
ggttctgcattcccgatcatccagacgtccggttctctttcgcacccattgatcagcact
gtggttccatttaggcacacatatgtgattgtgtcaccgcaacctgtcagccgtgtgact
caaatacttcctgtttcacctgttgatggtacagtcgctcctccagagctcaccgttgcc
gtgcttccagttggcacattatcagacagtgcaagcaagggcttgccatcacacccagta
gatactttctcccctacaaaagtggacagaagcaacacctgtgtgttagcagatggaaag
ccacggaagaacactgattccccacctcccaaaccagcagctgaagtccgtccagaggca
ccaaaatgtgttaaggagttcattaatcttgcaaagcctcacatcaggaatgtctgcaat
gccatgcgtgggggactgggaatggagtcgcactacattgacgtgcatcttatcccgagg
aaactcctaatcaaatctggcaagaatgctaacaagtgtctggagaaagaactggttgtg
ctcagcgactcagaacggaagcagagcctgctggatagaagtcaagtgttccaaaacaat
cttaccagaccaaaacagtcaatagcaatccttggaaaaaccggagtgggaaaaaccgtg
atgattcagcggttgtgcttggactgggcaagcggtagcctgtctcaatttcagtttgtg
tttttgttggactgtaaaaatttggaccttaagaaatcgaactacagcttaaaacattta
ctgtttgatttgtctgtgtctcccagttgcgaggaatccgacactgtgttcaaacacatt
ctctcttctccggaagacgttctcattattttcgatagctttgatgacattaaagacttt
gaagggctccttcaggctcccgctaaatcacccaaagacactaaatacacagtcaaacag
ttgttctcaggtctgttccagaaggaaattctcgcgggttgcacgcttctcatcgccaca
cgacctaaagaggttttaaaccaggtgctgcgaaaaatggacagccttttggagctttgt
cacttctcgccggaggacatagagctctacacgaccaaatatttcagggactcctccctc
caggagaaagcactgcagaaaatcaaaaaaaaaatatatatctttagaatatgctccaac
ccgttgctctgctggactacgtgtttccttctggagcatcaagacagcaactgtgaagct
ttaccttcaactctcacagagttgtatcagaaagtgaccttcaagcaattgcagctagct
agccgggaaatcagctcacaggatacccagcaattatgcaaaaccgcttgggaaggatac
aagaatcacaacacgcacataaaaatcgacgagtcacctgagttggtgaaatactatctc
aagagtggcataatcgtgtcatacgctcaacagaaccactttgaagacctttacattcag
aaccttctaggtgccttgcactcggtacaatccaaacaggtgaatgaaaaaatgctgttg
gcacacagcatggtacagcagaagaaacggaaaattcagggggagtcgcaggatgtgatg
cagagcttcgtcacgggcctgcttttccagaaggctcggcctgatggagtttccatcctg
gatggcaacgttgacgtacaggccaaaagaaaagctgtagaaacccatctgctgaacctg
aagcttaatgaattgaatcccgccaggctgctcgaactctttcattgtgtttatgagacc
agcaatgccaaactggccagactgctgttgaagaaactccccgacaatctgtcgttctgt
ggagcgcagctctgctcatcagatgtgtatgtcatatgccatcttcttcaacatgctacc
acgttgaaacggaccttctcgattaatctccaagaaacatcaattcctatcagtgacctg
agagagctggtggagctgaaatgtataacatccttctgggcacatacaggggacaccatt
gcattgtgggaggacttgcatgacagcaacaatgagttgaaactgaaaggtgccattgag
aaattcaccttgaacccactgaaagcaacacaggggcatcacatagagaacctgcctctc
cttgttcacattcacagagggaagaagttaccaaggagtgattttgtgcctgccctcaat
gaaggtgtaccagccctcaggcatcttcagaaactagaatttgagcttggagtacaaaat
ggtcccgaaatgtttcctaaacttatagaagttctgccttctttgcagtctctacagcat
ctggacattgagaaaaacaaaattggcgactctggagctgagaagctttctggtgttctg
cactttctggcatcgttgaaatggttaaatctgtctcagaactgcattggagatgctgga
gtggagaaactggctaaagctcttgcatcagtcccttcattacagagcctcagcctgtat
ggaaatcttatagctgacaatggagctgaagaacttgcattagttttaccagatatgaaa
cttctgcaggacttggatgtgaagtttaacaagttcacagacataggagctaaaaagctc
agcgctgctctgaaaaactgcactggcatgaagtctttggagctgtggaataactgcatt
ccatggggagtttttgaacaccttcatcatcaggacccacggattagatcactatga
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integrated database retrieval system
