Triplophysa dalaica: 130426002
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Entry
130426002 CDS
T09616
Symbol
sdk1a
Name
(RefSeq) LOW QUALITY PROTEIN: protein sidekick-1
KO
K16353
protein sidekick
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130426002 (sdk1a)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
Other
130426002 (sdk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Fn3_VIN3
V-set
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
130426002
NCBI-ProteinID:
XP_056608459
LinkDB
All DBs
Position
7:complement(16924561..17186547)
Genome browser
AA seq
2231 aa
AA seq
DB search
MNSNGSDPTSKEKFTVLPKARGPGRLNRKVESCVDSRGDGHSRSLWKPCKVHGLTFTRVD
QNAIMCDTKSTSSKILTHCHERNVSGNGKRKFALCTWSWWAFFCMHIHVLRAVAQVDVAP
YFKTEPGPPEIHLEGNRLVLTCLAEGSWPLEFKWMLNNTDITDFSPEYKYTISSLQRSNM
GIYQCVVRNRMGALLQKRADIQVAYMGDYIDTDQRKTVAQGRASILNFPAVSCFPRPQVT
WFRDGYKIIPSNRVAITLENQLVVLATAAADSGRYYVQAVNEKNGENKTSPSIYLNVADS
DAPADPVAPVIVIPPRNITVVAGVSEATLECIANARPVEKLSLVWRRNGVEVASGVGSFG
RRLTIINPTSADVGMYVCEASLLDSSVKPAEAKAFLSITEAPYFTAEPRRKMLGEVERNV
DIQCQARGVPMPRLEWYKDAVPLGKLKNPRYKVMSSMGLQVRKIQPSDAGIFQCFARNSA
GEAQVHTYLDVTSMAPAFSAPAVDITVTDGAVATFTCQVSGAPKPTITWKRDSQILASGS
VQIPRFTLLESGGLQVQPVILQDTGTYICYAANSEGAINASASLTVWSRTIISSPPTDRR
VIKGTTAILECAATHDPRVAIRYVWKKDEELVSQTRGGRINLQEGTLYISQTWSGDIGDY
TCDVISQAGNDSKSARLEVIELPHSPRNLQAGLNSNDSRSVDLSWMRPFDGNSPLLHYVV
ELSENNSPWRVYLSDVESTATRAMVKGLTPARSYQFRVCAVNQVGKGQYSSETNRLMLRE
EPPSAPPKNIVASGRTNQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGEYQQKNITNP
EINYCLITELIIWTQYEIQVAAYTGAGLGVFSQPVTEYTLQGVPTAPPQGVEAKSVNSTT
IEFTWNPPPQQFINGINQGYKLMAWPERSPEEVTIVTITPDYHGTRHLGYISGLKKFTWY
LTSVLCFTTPGNGPRSAPKLVQTYEDIPGPVGRLSFTEILDTSLKVSWEEPVDKNGIITG
YLVSWEVQGTNQSRVARTLTNTTLDYKVTGLTSLTTYTLEVAAMTEAGVGIITSSTISSG
VPPELPGAPSNLVISKISSRSATLKFRAGDDGKTTISKWIVDGQVGSIGEEEEWKVLYEK
ENEPEAQVLEVPNLTPFTHYRFRMRQVNIVGSSPVSAPSRVIQTLQAPPDLAPSSVTVRT
ASETSLWLRWVPLPESEYNGNPESVGYRVKAWRADQRGEVSTRLVNDRLEREITLEXLEE
WTEYQLQIQAFNSIGPGPWSDAVKGRTRESVPTAAPENMTAEAMSSSRILVTWGPVTEHA
QNGNILGYKVLYKEKDSDSDAQVNVVKGNLTQSVLLRNLRKYVQYEIQVLAFTRIGDGQL
SSPPVLERTKDDVPGPPMRLVFPEVRLTEVRVVWQPPVDPNGIIMGYQVAYRLDSGDPNQ
FITVEVGPDTRQFTASNLTPESAYIFRISAKTKQGWGTPAQAVVITTEIRERPQPPQRLR
VSQEQVQSRKLRLSWVPGGDGSSPVRYFTLQTQELPDGDWTTHSSAISHNNTSWEVDRLK
PFTSYKLRMMATNDVGDSKYSQETDAITTLQDVPDEAPVIQAVKPSTTTSVLVQWQPPKE
ESVNGVLVGYRIYYRELQYDTAPQESKRAVNSSLLRTELTAKSTVKTVSNPSLTVFELTQ
LQKYRRYEIVITAYNVIGESPPSSPVEVFVGEAAPSVAPQNIQINTLSSTQLEVQWEPPP
VETQNGIIQGYKILYWEMDNQNETERVKILFRPETNMRLKNLTSYTYYMVKLSAFNAAGD
GPFSEPRRGRTLQAAPSAPSFISFSEVTSSTLNVSWGFPLLPNGVVEGYRVVYEPTAPIQ
GVTKLVTVDIRGSWQRWLKVRDLTKGVTYCFRVQAKTIAYGPEAEANITAGPVKGSPGSP
VEMSITKTGSMLDIHWTPGETGGGHVIGYVIEARPSDEGLWDTFVRHLPPTSTSHSVNLD
RLRQGISYQFRVLAINEFGYGEPSAPSGAMSAQVDTPFYEEWWFLVVLALCGLILLLLVV
FGLVLHGQNRKYKSCGTGKAVSTVEETVTLDNGGFTALELNSRPIHVKGVFLRKNGTRSP
PRPNPAGLRYSDEDICSNYNGGVSTESTALTERPADMSESEATDSECEEEPIKHSFVNHY
MSDPSYFNSWKRQQKGLKQTLACSYEDCASGDAESYYQTVVTQHSVGGVYTPTGQPTPGS
RTPVTGFSSFV
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgaactccaacggatcggatcctacatccaaagagaaattcacggtgctgcccaaagca
cgcggacccgggagactaaacaggaaggtggagagctgtgttgactcaagaggcgacgga
cactcgcgctctctgtggaaaccctgtaaagttcacggactgactttcacgcgtgtggac
cagaatgccatcatgtgtgacaccaagagcacatcctcgaagattttaacacattgtcac
gagaggaatgtcagcgggaatgggaagagaaagtttgcattgtgcacttggagttggtgg
gcgtttttctgcatgcacatccacgtgttgagagcggtggcacaagtcgatgtggccccg
tacttcaaaacagagccgggacctccggagatccacctagaaggaaaccgtctggtcctg
acctgcctggcagagggcagttggcccctggagttcaaatggatgctcaacaatacagat
atcacagacttctccccggagtacaagtacaccatctcctctctgcagcgctccaatatg
ggtatttaccagtgtgtggtgagaaacagaatgggtgctttgctccaaaaaagagccgac
atacaggtggcatacatgggcgactacattgacactgaccaaagaaagacagtcgcacag
ggtagggcctccatcctcaacttcccagcggtcagctgcttcccgcggccacaggtgaca
tggttcagggacggctacaagatcattcccagcaacagagtagctataacgctggagaac
cagctcgtggtgctggccactgccgcggcggacagcgggaggtactacgtccaggctgtt
aatgagaagaacggagaaaacaagacaagtccatccatttacctgaatgtggcggattcg
gatgccccagcagaccccgtggctccagtgattgttatcccaccccggaacataacagtg
gtggcgggggtgagcgaggccacgctggagtgtatagcaaatgcacgtcctgttgaaaaa
ctgagtttggtgtggcggaggaacggcgtcgaagtagccagcggcgtgggctccttcggc
cgacgcttgaccatcatcaaccccaccagtgccgatgtgggcatgtacgtgtgtgaagcc
tcgctgttggacagcagcgtaaagcctgcggaggcaaaagcgttcctctctatcacagag
gcgccctattttaccgccgagcccagaagaaagatgctgggagaagtggagagaaatgtg
gatatccaatgccaagcacgaggggtgccaatgcccaggttggagtggtataaggatgca
gttcccctcggtaaactcaaaaaccctcgctacaaggtcatgtccagcatgggcctccag
gtcaggaagatacagcccagcgatgccggaatcttccagtgcttcgccaggaactcggcc
ggagaggctcaggtccacacttacctggacgtcacgagtatggctccagccttcagcgcg
ccagcggttgacatcactgtcacagatggagcagtggccacgttcacctgtcaggtgtct
ggagctcctaaacccaccatcacctggaaaagagattcacagattctagccagcggttca
gtgcagattccacgtttcacactgttggagtctggtggtctacaggttcagcctgtcatt
cttcaggacacggggacgtacatctgctacgctgccaactcagagggagctatcaacgca
agcgcctctctcaccgtgtggagtcgcaccatcatatccagccctcccacggacagacgt
gtcatcaaggggacgacagccatcttggagtgtgccgcgacccacgacccccgtgtggca
atcaggtacgtgtggaaaaaggatgaggaactagtgagccagaccagaggggggcgtatt
aacttgcaggagggaaccttgtacatcagtcaaacctggtccggggacatcggggactat
acctgtgatgtcatatctcaggccggcaacgattccaagtcagcccgtctggaggtcatc
gagctaccacactcaccccgaaacctacaggccggcctcaactccaacgacagccgcagc
gtggacctgtcctggatgagaccctttgatggaaacagccccctcctgcattatgtggtg
gagctctcagaaaacaattccccttggagagtgtatttgtctgacgtggagtccacagca
acccgggccatggtgaagggactaaccccagcccgctcataccagttcagagtctgtgcg
gtcaatcaggtgggcaaaggacagtacagctccgaaaccaacagactgatgctgagggaa
gaacctccgagtgctccacccaaaaatatcgtagccagtggcagaaccaatcagtccatt
atggtgcagtggcagccgcccccagaacctcagctgaatggagttctaagaggatacgtc
ctcaggtaccggctggccggtctccccggagagtaccagcagaagaacatcaccaaccct
gagatcaactactgtctgatcacagagctcatcatctggacccagtatgagattcaggtg
gccgcgtacacgggggctggcctgggcgtcttcagtcagcctgtcaccgagtacacactg
cagggagttcctacagcacccccacaaggcgtggaagccaagtcagtaaactcaaccacc
attgaatttacttggaatccaccacctcaacagttcatcaatggcataaatcaaggttac
aagctaatggcttggcccgagcgctcaccggaggaggttaccatcgtgaccatcacccct
gattatcacggaacacgtcacctcggatacatcagcggtctcaaaaagtttacctggtac
ttgacgtcagtgctgtgtttcaccactccagggaacggaccgcgcagtgctcctaaactg
gtacagacatacgaggacattccaggccctgttggtcggctgagttttacagagattttg
gacacgtctctgaaagtgagctgggaggaacctgtggataaaaacggcatcattactggt
taccttgtgtcctgggaggtgcagggaacgaaccagtcaagggtggcacggactttgacg
aacaccacgctggattataaggtcaccggtttgacgtcgctcaccacatacacgctggag
gtcgcagccatgacggaggcaggcgtgggaattataacgtcctccacgatttcctccgga
gttccaccagaacttccaggagctccatcaaatctggtcatttctaaaatcagctcgcga
tctgccacactgaagtttcgtgcaggggatgatgggaagaccaccatctccaagtggatt
gttgatgggcaggtgggcagtatcggtgaagaggaagagtggaaggtgttgtacgagaaa
gagaacgagcctgaggctcaggtgctggaggtgcccaacctcacaccgtttacacattac
aggtttcgaatgcggcaggtgaatattgtgggatcgagtccggtgagtgcgccctcccgc
gttatacagaccctgcaggcccctcccgacttggcgcctagtagcgtgacggtacgcacg
gccagcgagaccagtctgtggttacgatgggtgccgttgcccgaaagtgagtacaacggt
aaccctgagagcgtgggctacagggtcaaagcgtggcgggcggaccagcggggcgaggtc
agcacacgtttggtgaacgaccgtctagagagagaaatcacactggagngtctcgaggag
tggaccgagtatcagctgcagattcaggccttcaattccatcggccccgggccatggagc
gacgcggtgaagggtcgcacgcgcgagtcagtgccaacagcggctccggagaacatgaca
gccgaggccatgagctccagtcgcatcctggtaacctgggggccggtcactgagcacgcg
caaaacggaaacatcctcggatacaaggttctgtacaaagaaaaggactcggattcggat
gcacaagtgaatgttgtgaagggaaacctgacgcagtcagtcctgctgcggaacctgcgt
aaatacgtccagtacgagatccaggttctggcgttcacgcgaataggagacggccagctg
agcagcccaccggtgctggagaggaccaaagatgatgttccaggaccacccatgagactg
gtgttcccagaggtgcgtctgacggaggtgagggtggtctggcagccccctgtggacccc
aacggcataataatgggataccaggttgcttatcgtctggattcaggggatcccaaccag
tttatcacggtagaagtgggtccagatacacgtcagttcacagcgtccaacctgaccccg
gagtcggcctacatctttcgcatctctgccaagaccaagcagggctggggaacgcccgca
caggctgtggtcataactactgagattagagagcgacctcagcctccacagcgcctgcga
gtatcccaggaacaggtgcagtcccgcaaactacgcctcagttgggttcccggaggagac
ggctcgtctcccgtgcgttacttcaccctgcagacgcaggagttgcctgacggagactgg
accactcattcttctgctataagccacaataatacgtcctgggaggtggacaggctgaaa
cccttcacttcatacaagctgagaatgatggcaactaatgatgttggagacagcaagtac
agccaagagacggatgcaattacgactttacaagatgttcctgacgaggcaccggtgatt
caagctgtgaaaccctccacgacaacatccgtgctggtgcagtggcagccgcccaaagaa
gagagtgtgaatggagttctggtgggctatcggatctactaccgcgaactccagtacgac
accgctccacaggagtcaaagagggccgtcaacagctccttgcttcgcaccgaactgaca
gccaaaagcactgtgaagaccgtcagcaatccttcattaaccgtattcgagctaacacag
ctgcagaaatacaggcgctatgaaatcgtgatcactgcctacaacgtcatcggcgaaagt
cctccgagttctccggtagaggtgtttgtcggggaagcagccccctccgtagcccctcag
aacatccagatcaacaccttgtcatccacccagctggaggtccagtgggagccgcccccc
gtcgagacccaaaatggcattattcagggatataagattctttactgggagatggacaat
cagaacgaaacagaaagagttaagattctctttcgaccagaaaccaacatgagattgaag
aacctgaccagttacacatactacatggtgaagctctctgccttcaacgcagctggagac
ggtccgttcagtgagcccaggagggggcgcactcttcaagccgcccccagtgcccccagc
ttcatcagtttctctgaggtgaccagcagcaccctcaatgtgtcctggggattccctctg
ttgcccaacggcgtggtggagggctacagggtggtgtatgagcccacagctcctattcaa
ggcgtgactaaactagtaactgtggatatccgtggcagctggcagcgctggctgaaggtt
cgagaccttaccaagggtgtcacctactgcttccgcgttcaggcgaagactattgcctac
gggccagaagcggaagccaacattacagccggccctgtcaaaggatctcctggatcacct
gtagaaatgtcaatcacaaagaccggctcaatgctcgatatccattggacacccggagag
acaggcggaggtcacgtcataggctatgtcatcgaagcacgtccatcagatgagggattg
tgggatacctttgtgcggcacctgcctcccaccagcacctctcactctgtgaacctggac
cgcctcagacagggcatcagctaccagttcagagtcctggcgatcaatgagtttggctac
ggtgagcctagtgcgccctctggtgctatgtcagctcaagttgacacgccgttctatgag
gagtggtggtttctggtggtgttggcgctgtgcggtctgattctgctgctgctggtggtt
ttcggcctcgtcttgcatggccagaacagaaagtacaagagctgcggaacaggtaaagcc
gtgtcaacggtggaggagacggtcacactggacaatggaggattcacggctctggagctc
aacagcaggcctattcatgtcaagggcgttttcctgaggaagaatggaaccagatcacct
cctcgacccaatccagctggactacgctattctgatgaagacatctgcagcaactacaac
ggtggggtttccacagagagcacagcactgacagagagaccagctgacatgtccgagtct
gaggcgacagacagcgaatgtgaagaggagccaatcaaacactcgttcgtgaatcactac
atgagcgacccctcctacttcaactcctggaagcggcagcagaaggggctcaagcagact
ctggcctgttcctacgaggactgcgcgagcggcgacgcggagtcttactatcagacagtg
gtcacgcagcacagcgtgggcggggtctacacccccacaggccagcccacccctggctca
cggactcctgtcacgggcttctcctcgtttgtgtga
DBGET
integrated database retrieval system
