KEGG   Triplophysa dalaica: 130426103
Entry
130426103         CDS       T09616                                 
Symbol
col1a1a
Name
(RefSeq) collagen, type I, alpha 1a
  KO
K06236  collagen type I alpha
Organism
tdw  Triplophysa dalaica
Pathway
tdw04510  Focal adhesion
tdw04512  ECM-receptor interaction
tdw04518  Integrin signaling
tdw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130426103 (col1a1a)
   04518 Integrin signaling
    130426103 (col1a1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130426103 (col1a1a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130426103 (col1a1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tdw00536]
    130426103 (col1a1a)
Glycosaminoglycan binding proteins [BR:tdw00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130426103 (col1a1a)
SSDB
Motif
Pfam: Collagen COLFI VWC VWC2L_2nd TILa Amnionless
Other DBs
NCBI-GeneID: 130426103
NCBI-ProteinID: XP_056608623
LinkDB
Position
7:complement(7671590..7686961)
AA seq 1448 aa
MFSFVDIRLALLLSATVLLARGQGEDDRPAGSCIFDGKTYSDRDVWKPEDCQICVCDSGT
VMCDEVICEDTTDCPNPVIPQGECCPVCPDDEFQEPSVEGPKGAPGDKGDRGLPGPPGND
GIPGQPGLPGPPGPPGPPGLGGNFSPQMSGGFDEKSGGGMAVQGPMGPIGSRGPPGPPGA
SGPQGFSGPPGEPGEAGSPGPMGPRGSAGPPGKNGEDGESGKPGRAGERGTPGAQGARGF
PGTPGLPGIKGHRGFSGLDGAKGDGGPAGPKGEAGSPGENGTPGAMGPRGLPGERGRAGP
SGAAGARGNDGAAGAAGPPGPTGPAGSPGFPGGPGAKGEVGPQGSRGGEGPQGARGEPGN
PGPAGAAGPAGNNGADGSPGLKGAPGAPGIAGAPGFPGPRGPPGAAGAGGAPGPKGNTGE
AGAPGAKGESGVKGEAGAAGAQGAPGPPGEEGKRGPRGEIGAAGTRGAAGERGAPGARGF
PGADGSAGPRGGPGERGGPGAVGPKGATGESGRNGEPGMPGSKGMTGSPGSPGPDGKMGP
AGASGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPLGATGAPGKDGD
VGAPGASGPAGPSGERGEQGPAGSPGFQGLPGPQGSTGEPGKSGEQGVPGEAGAPGPAGS
RGDRGFTGERGAPGPAGPAGARGSPGSAGNDGAKGDAGAPGTSGAQGPPGLQGMPGERGS
AGLPGLKGDRGDQGGKGADGASGKDGARGMTGPIGPPGPAGSPGDKGETGAAGLVGPTGA
RGAPGERGESGSPGPAGFAGPPGADGLPGAKGEAGDNGGKGDAGPPGPAGATGTPGPQGP
VGASGPKGGRGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPSGPPGKEGQKGNRGETGP
SGRTGEVGVAGPPGAPGEKGNPGSEGAPGSSGIPGPAGIAGQRGIVGLPGQRGERGFPGL
SGQSGEPGKQGPGGPSGERGPPGPMGPPGLGGPPGEPGREGTPGNEGSAGRDGASGPKGD
RGETGSAGASGAPGPPGAPGPIGPSGKTGDRGESGPSGPAGAAGPAGPRGPSGPAGARGD
KGEAGEAGERGMKGHRGFTGMQGPSGPPGPSGEPGPAGTSGPAGPRGPAGSAGSAGKDGM
SGLPGPIGPPGPRGRNGEIGPAGSPGSPGPPGPPGPSGGGFDIGFIAQPQEKAPDPFRHF
RADDANVMRDRDLEIDTTLKSLSQQIESIISPDGTKKNPARTCRDLKMCHPDWKSGEYWI
DPDQGCNQDAIKVYCNMETGETCVYPTQSNIPKKSWYTSKNIKEKKHVWFGEAMTDGFQF
EYGNEDSKPEDVNIQLTFLRLMSSDASQNITYHCKNSIAYMDQASGNLKKALLLQGSNEI
EIRAEGNSRFTYTVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEFGI
EVGPVCFL
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgttcagctttgtggatattcggttggcgctgttgctcagtgcaacagtgcttttggca
agaggacaaggcgaggacgatcgcccagctggcagctgcatatttgacggtaagacctac
agtgacagggatgtctggaaaccagaggattgtcaaatctgcgtgtgcgacagcggcacc
gttatgtgcgacgaggtgatctgcgaggacacgaccgactgccccaacccagtgattccc
cagggcgagtgctgccccgtctgcccagacgacgagttccaggagcccagtgttgaggga
cctaaaggtgctcccggtgacaagggtgacaggggacttcctggtcctcctggcaatgat
ggaatccctggacagcctggccttcctgggcccccaggccctcctggaccacccggcctt
ggtggaaacttttcccctcagatgtctggtggctttgatgagaaatccggaggaggaatg
gctgtccaaggccccatgggacccattggctcccgtggaccccctggacctcccggagca
tctggaccacaaggtttttcaggtccccctggtgagcctggtgaggctggttctcctggt
ccaatgggtccccgtggttctgctggcccacctggaaagaatggagaagatggtgaatct
ggcaaacctggtcgtgccggtgagcgtggaacccctggcgcacagggtgctcgtggattc
cccggaacccctggacttccaggcatcaagggacacagaggattcagtggtctagatgga
gctaagggagatggtggccctgctggaccaaagggtgaggctggttcccctggtgagaac
ggtacccctggtgctatgggtcctcgtggtctgcctggcgagagaggccgtgctggacct
tctggtgctgctggtgcccgtggaaatgatggtgccgctggagctgctggtccccctggc
ccaactggccctgctggttccccaggattccctggtggccccggagctaagggagaggtt
ggtcctcagggaagccgtggtggtgagggaccccagggagcccgtggtgagcctggtaac
cctggacctgctggtgctgctggacccgctggtaacaatggagctgatggttcccctggt
cttaagggtgcacctggcgctcctggtattgctggtgcccctggtttccccggacctcgt
ggtcctcctggtgctgctggagctggtggtgcccctggccctaagggcaacactggtgag
gctggtgctcctggtgccaaaggagagtctggtgtcaagggagaggctggtgctgctgga
gctcagggagcccctggaccccctggtgaagagggaaagagaggaccccgtggtgagatc
ggtgctgcaggtacccgtggagccgctggagagcgtggtgcccctggtgctcgtggtttc
cctggtgctgatggatctgctggtccaagaggtggtcctggtgaacgtggaggtcctgga
gcagtcggacctaagggtgccactggtgagtctggccgcaacggtgaacctggcatgcca
ggatccaagggtatgactggtagccctggcagccctggacctgatggcaagatgggacct
gctggtgcttctggtcaagatggccgccctggaccacccggccctgttggagctagagga
cagcctggtgtcatgggattccctggacccaagggtgctgctggtgagggaggcaaacct
ggagagaggggtgtgatgggacctcttggtgcaactggtgctcctggtaaggatggtgat
gttggtgcccctggtgcttctggacctgctgggccttctggtgagagaggtgagcaggga
cccgctggttctcctggattccagggtctgccaggacctcaaggatcaactggtgagcct
ggcaaatctggtgagcagggtgtccctggagaggctggagctcctggacccgctggatcc
agaggtgatagaggattcactggtgagcgtggtgcccccggccctgctggtcctgctggt
gcccgtggttctcctggttcagctggtaacgatggtgccaagggtgatgctggtgctcca
ggtacctctggtgctcagggtcctccaggacttcaaggcatgcctggtgaacggggttct
gctggtctgccaggtcttaagggtgacagaggtgaccaaggtggcaagggtgctgatggt
gcctctggtaaagatggcgcccgtggtatgactggaccaattggacctccaggacctgcc
ggatctcctggtgacaagggagagactggtgctgctggacttgttggacctactggtgcc
cgtggagcacctggtgagcgtggtgagtctggttcccctggacctgctggatttgcagga
cctcctggtgctgatggtctgcctggtgctaagggagaggctggtgacaatggtggtaag
ggtgatgctggtcctccaggacctgcaggagcaactggtacccctggacctcagggtcct
gttggagcttctggaccaaaaggtggtcgtggtgcagctggtccccctggtgctactggt
ttccctggtgctgctggcagagttggacctcctggcccctctggtaatgctggaccccca
ggaccttccggaccccctggaaaggagggccagaaaggtaaccgtggtgagactggacct
tctggtcgcactggtgaagttggtgttgctggaccacctggagctcctggggagaaggga
aatcctggatctgagggtgcccctggttcttctggtatccctggacctgctggtattgct
gggcagcgtggtattgttggtcttcccggacaaagaggcgagcgtggtttccctggtctc
tctggccaatctggagaacctggcaaacagggacctggtggcccctctggagaacgtgga
cctcctggtcctatgggaccccctggattgggtggacctcctggcgagcctggtcgtgag
ggtactccaggtaatgagggttctgctggacgtgatggtgcttctggccccaagggtgac
cgtggtgagactggatctgctggtgcttcaggtgcccccggaccccctggcgctccagga
cccattgggccttctggaaagactggtgatcgtggagagtctggtccctctggtcctgcc
ggtgctgctggccctgctggtcctcgtggtccctctggacccgctggagcccgtggagac
aagggtgaagctggtgaggctggtgagagaggcatgaagggacatagaggattcaccgga
atgcagggaccctcaggacctcctggaccttcaggagagcctggacctgctggaacttct
ggacccgctggacctagaggccctgctggatctgcaggttcagctggtaaggatggtatg
tctggacttcctggacccattggacctcctggaccccgtggtcgcaatggtgaaattgga
ccagctggtagccctggatctcccggaccacctggacctcctggaccctctggtggtgga
tttgatatcggcttcattgcccagccacaagagaaggcccccgatcccttccgtcacttc
cgtgctgatgatgccaacgtgatgcgtgatcgtgaccttgagattgacaccaccctcaag
tccctgagccaacagattgagagcatcattagcccagatggcaccaagaagaaccctgca
cgtacttgccgtgacctgaagatgtgccacccagactggaagagcggcgagtactggatt
gatcctgaccagggatgcaaccaagacgccatcaaggtctactgcaacatggaaactggt
gagacctgcgtctacccaactcagtcaaacattcccaagaagagctggtacacaagcaag
aacatcaaggagaagaagcatgtctggttcggagaggccatgactgatggcttccagttc
gagtatggcaatgaggactccaagcctgaggatgtcaacattcagctcaccttcttgcgt
ctcatgtcctccgacgcctcccagaacatcacataccactgcaagaacagtattgcatac
atggaccaggcctctggcaacctgaagaaggctcttctgctgcagggctccaacgagatc
gagatcagagcagagggcaatagccgcttcacatacaccgtcactgaagatggttgcacg
tcgcacaccggtgcatggggcaagacagtcatcgactacaaaacaacaaaaacatcccgt
ctgcctattattgacatcgctcctatggacgttggcgcacctaatcaggaatttggcatt
gaagttggcccagtctgcttcttgtaa

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