Triplophysa dalaica: 130426135
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Entry
130426135 CDS
T09616
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecule (CAM) interaction
tdw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130426135 (lrrc4ba)
04517 IgSF CAM signaling
130426135 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130426135 (lrrc4ba)
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
NGL family
130426135 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
LRRNT
Ig_2
LRR_LRWD1
VEGFR1-3_N_Ig-like
SAYSvFN
Motif
Other DBs
NCBI-GeneID:
130426135
NCBI-ProteinID:
XP_056608682
LinkDB
All DBs
Position
7:complement(11857965..11892798)
Genome browser
AA seq
731 aa
AA seq
DB search
MRITTVTSLSSPSPLLLLLAQLLLRLILPVQQAAGAASTCPTPCSCSNQASRVICTRRNL
DEVPDHISNNTRYLNLQENSIQVIKSDTFKHLQHLEILQLSKNQIRLIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVTSLRRLDLGELKKLDY
ISDAAFVGLIHLRYLNLGMCGLKDIPNLTPLERLEELELSGNRLEIIRPGSFQGLNALRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTSADVNFNYTYFTTVTVETVETTGEEDSALRVFNETFINILGTT
TSGHLLPDAFPTTASSLSILGSSSSPRATKPTFTVPISEPNYPSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARTIEIINVEDEIGSAAGNRGSGISGGSTVP
QGGSGGQSLRLHHPEIVNLPNLARAEHLNHYYKAHHFNNNMMGLGLGGGSGGGLNNNNNP
SPCSQAQNTPISCTQVPVSAGSMCSMPSSMPLPTLGIHGSLKGLMSKAQNPQIEPLLFKS
SSKENVQETQI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccagcctttctagtccctcccccctcctcctcttattggct
cagctgcttctgcggcttatcctacctgttcaacaggcagcaggagccgcttcaacctgt
cccactccctgcagttgttccaatcaagctagtcgagtgatctgtacaagacgaaactta
gacgaggtgcctgatcatatatcaaacaacacacgatacctcaacttacaagagaactcg
atacaggtcataaaatcagacacattcaagcatttgcagcacctggaaatcctccagctc
tccaagaaccagatacgtctgatagaggtcggtgctttcaatggcctcccaaacctcaac
actttggaactgtttgacaaccgcctcactctggtaccatcacaggctttcgagtacctc
agcaagctgcgtgaactgtggttacgaaacaatccgattgagaccttaccagcatatgct
tttcaccgggtcacctcactgcggcgtcttgacctcggtgaacttaagaagttggattat
atatctgacgcagcctttgtcggacttattcacctgcgctacctgaacttgggaatgtgt
ggcctgaaggacatccctaacttgactcccctggagcgactggaagagctggagttgtct
gggaaccgtttggaaatcattagacccggatcgttccaaggcctgaatgcattgcgtaaa
ctgtggctcatgcactctcaaatgtctgtcattgagcgaaatgcatttgacgatctcaag
aacctggaggagctcaacctatcccacaattcgctacactcattgccccatgaccttttc
acacctctgcagaagctggagagagtgcatcttaaccataacccatgggtctgcaactgc
gacgtgctgtggctaagttggtggcttaaagaaaccgtgccgagcaacacaacctgctgt
gcgcggtgccatgcaccgccctacctgaagggaaaatacatcggagagctggaccagagc
catttcacctgctatgcccctgttatcgtggagccaccaactgacctcaatgtgaccgag
gggatggccgcagagctcaagtgtcgcaccggcacctccatgacctctgtcaactggatc
acaccaaatggaaccttaatgacccacggctcttatcgagtcaggatttctgttctgcac
gatggcacactgaacttcaccaacgtgacgctgcgtgacacgggtcagtacacctgcatg
gtgaccaactctgctgggaacaccactgcaactgctgttttaaatgtgacctctgcagat
gtcaacttcaactacacctacttcaccacagtcacagtagaaactgttgagactacagga
gaggaagattctgctttgcgtgtctttaatgagactttcatcaatatccttggcactaca
acctctgggcacctcttgcctgatgctttccctactactgcttcttctctgtctatcctt
ggctcatcctcttctccccgtgcgaccaaacccacattcactgttcccatctctgagcct
aactacccttctgggctagacgatgtgatgaagaccaccaagatcattattggttgtttt
gtggccattaccttcatggcggctgtcatgctggtggtattctacaagttgaggaagcag
caccagttgcacaaacaccacggtccggcacgaacaatcgaaatcattaatgttgaagat
gagattggatctgcagcgggcaatcgtggcagtggcatctcaggaggatcaacagtacca
caaggagggtctggcggacagagcctgaggcttcaccatcccgagattgtcaacctcccc
aaccttgcccgagcggagcatctgaaccattactacaaagcccatcacttcaacaataac
atgatgggtctgggtcttggtggaggatctggcggaggcctaaataataacaacaaccct
tctccctgctcccaggcccagaatacccccatctcatgcacccaggtgcctgtttctgca
ggaagtatgtgctccatgccttcttcaatgcccctgccgactcttggcattcacgggtca
ctgaaagggcttatgagtaaagcccagaacccacagattgagccattgctctttaagagc
agctccaaagagaatgtccaagaaacccagatttga
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