Triplophysa dalaica: 130426274
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Entry
130426274 CDS
T09616
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130426274 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130426274 (smarca4a)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130426274 (smarca4a)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130426274 (smarca4a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130426274 (smarca4a)
Chromatin remodeling factors
BAF complex
130426274 (smarca4a)
PBAF complex
130426274 (smarca4a)
GBAF(ncBAF) complex
130426274 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
130426274
NCBI-ProteinID:
XP_056608935
LinkDB
All DBs
Position
7:complement(6316265..6328901)
Genome browser
AA seq
1623 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLAPSPGSAHGMMGPSPGPPSSGHPLPPQGPSGY
PQDGMHPLHKPMEGMHEKGIPEDQRYAQMKGMGMRQGGHSGRGPPPSPMDQHSQGYPSPL
GGSDHAPSPVPSNGPPSGPMMPSGPGALPMEGGDPQAMNQNRSVGAGVAGPSAGPSVGPP
NAGGPGVAGGATPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQGMP
NMPPGSGQGAGPPGPGGLGPGVPNYNRPHGMVGPNMPPPGPSGVPPGLQGQPPNGPPKSW
PEGPMVSAAAPASGPQKPIPPQPTGRPSPVPPSVPPAASPVMPPQTQSPGQPPQPPPMVL
HQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQDLENLPGSLAGDLRTKANIELK
ALRLLNFQRQLRQEVVVCMRRDTALETALNGKAYKRSKRQSLREARITEKLEKQQKIEQE
RKRRQKHQEYLNSILQHAKDFKEYHRSITGKMQKVTKAVATYHANTEREQKKENERIEKE
RMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKDKKKKKK
KKKSEIVEGGAPALGPDGEPLDETSQMSDLPVKLIHVNSGKILTGMDAPKAGQLDAWLEM
NPGYEVAPRSDSEDSGSEEEEDEEDEQHQPSQSSDEKKKIPDPDCEDVSEVDVRLIIDDA
KQDVDDEYGSAAFARGLQSYYAVAHAVTERVDKQSSLLVNGMLKQYQIKGLEWLVSLYNN
NLNGILADEMGLGKTIQTIALITYLMENKRVNGPFLIIVPLSTLSNWVYEFDKWAPSVVK
ISYKGSPAARRAFLPILRNGKFNVLITTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHC
KLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG
EKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM
QAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFSGGIVQ
GADLYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFSFRNFKYLRLDGTTK
AEDRGTLLKNFNDPSYQYFIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAH
RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL
EHEEQDEEEDEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELP
TWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGNLDDIEEEV
RHKKTTRKRKRDRDLDLPGPATPSSSGRSRDKDDDTKKQKKRGRPPAEKLSPNPLALTKK
MKKTVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSL
NDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESEGEDSEEEEDEL
DEGSESESRSVKVKIKLSRKEKVERGKGRRRTGRSSRPKPVVSDDDSEEDQEEEHSASGS
DDD
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgacccacctatgggtgggacgcctcggccgggcccttccccaggccct
gggccatctccaggagctatgttagcaccgtcacctggctctgcccatgggatgatgggc
cccagccctggtcccccctcttcaggtcatcctctacctccgcaggggccctcaggttac
cctcaggacggcatgcacccactgcacaagccaatggaaggcatgcatgagaaaggcatt
cctgaagatcagcgttacgctcaaatgaagggtatgggcatgagacaaggtgggcacagt
ggcaggggaccaccacccagccctatggatcaacattcccaaggttacccctctcctctg
ggaggatctgatcacgccccgagtccggtgccttccaacggtcctccctctggtcccatg
atgccatccggccctggcgctttacccatggagggtggtgacccacaggccatgaatcag
aaccggagcgtaggtgcgggtgtcgctggacccagtgcgggtcccagcgtgggacctccc
aatgcaggagggcctggtgttgccgggggagccacaccttttaaccagaaccagctccac
caacttcgggctcagatcatggcgtataagatgcttgcacgtgggcagcctctgcccgat
catttgcagatggcagtacaggggaaaaggccgatgccgggtatgcaacagggaatgccc
aacatgccccctggctcaggtcaaggagcaggccctcctggaccggggggcctaggacct
ggggttcccaattataatcgaccacatggaatggtcggaccaaacatgcctcctccggga
ccctctggggttccccctggccttcagggacaacctcctaatggaccacctaaatcatgg
cctgaagggcccatggtgagtgctgcggcccctgccagtggcccacaaaagccgatacct
ccacagcccactggccgcccctctccagtgccgccttcagttccacccgccgcctcgccc
gtcatgccccctcaaacccagtctccagggcaaccaccccaaccgccccctatggtgctg
catcagaaacagaaccgcatcacgcccatccagaaaccccgtggccttgatccggtggag
atccttcaagaaagagagtacaggctacaggctcgtattgcacatcgcattcaggacctg
gagaaccttccgggttctctagccggagacttgaggaccaaagctaacattgagctgaag
gcactgaggctcctgaactttcaaagacagctccgtcaagaagtggtggtgtgcatgaga
cgtgacacggccctcgagacggcgctgaacggcaaggcctacaaacgcagcaagagacag
tccctccgtgaggctcgtatcactgagaaactagagaaacagcagaagatcgagcaggag
cgcaagcgcagacagaaacaccaggagtatctcaacagcatcctgcagcatgcaaaggac
ttcaaggaataccatcgctccatcaccggaaagatgcagaaggtgaccaaagctgtggcc
acgtaccatgccaacactgagagggagcagaagaaggagaacgagaggatcgagaaggag
agaatgaggcgcctgatggctgaggatgaggagggttacaggaagttgatcgaccagaag
aaggacaaacgtctggcctacttgctgcagcagaccgacgagtacgtggcaaacctcacc
gagctcgtccgagcccacaaagctgtgcaggccctcaaggacaagaagaagaagaagaaa
aagaagaagtctgagattgtggagggcggagctcccgctttgggtccagatggagagcct
ctggacgagaccagtcaaatgagcgatctgcctgtgaagttgattcacgtgaatagcgga
aagatcctgaccggcatggatgctcctaaagccggacaactggatgcttggctggagatg
aatccagggtacgaggtggccccgcggtcagacagtgaagatagtggctcagaggaggaa
gaggatgaagaggatgaacagcatcagccttctcagtcctcagatgagaaaaagaagatc
ccagatccagactgcgaagatgtgtccgaggtggatgtccgtctcatcatcgatgacgcc
aagcaggacgttgatgatgaatacggtagcgcggccttcgctcgcggcctgcagtcatac
tacgctgtggctcacgcagtcactgagagggtggataaacagtcgtccctgctggtgaac
ggaatgctcaaacagtaccagatcaaaggcttggagtggctggtgtctctgtataacaat
aacttgaatggaattctggctgatgaaatgggtttggggaaaaccatccaaaccatcgct
ctcatcacctacctcatggagaacaagcgagtcaacgggcccttcctcattattgttcct
ctctccactctttccaactgggtgtacgagtttgataaatgggctccttctgttgtgaaa
atttcttacaagggctctccagctgctcgccgagcgttcttgcccattttgcgtaacggc
aagtttaatgtgctgatcactacttacgaatatatcatcaaagacaagcaagtgctagcc
aagctgcgttggaagtacatgatcgtggacgaggggcatcgtatgaagaaccatcattgc
aaactgactcaggtgttaaacacgcactatctggcgccacggcgtgtgctgctcaccggc
acgccgctgcagaacaagctgcccgagctctgggcgctgctcaacttcctgctgcccacc
atcttcaagagctgcagcacctttgagcagtggttcaacgctccgttcgccatgactgga
gagaaggtggacctgaacgaggaagagaccattctgattatccgacgtctgcacaaagtg
ctccgccccttcttgctcaggaggctgaagaaggaagtggaggcccagctgcctgagaag
gtggagtatgtgatcaaatgtgacatgtcggccctgcagagagttctgtatagacacatg
caggctaaaggagtgctgctcaccgacggatcagagaaggacaaaaagggtaaaggaggc
actaagactctgatgaacactattatgcagctgaggaagatctgtaaccacccttacatg
ttccaacacatcgaggaatccttctcggaacaccttggcttcagcgggggcattgttcag
ggggctgatctgtaccgtgcctctggtaaatttgagctgctggaccgtatcctgcccaaa
ctcagagccaccaaccacaaagtgctgctcttctgtcagatgacaactctcatgaccatc
atggaagactacttctccttccgcaacttcaagtacctgcgcttggacggaaccactaaa
gctgaagatcgcggcacgctgctgaagaactttaatgatccatcctatcagtacttcatt
ttcttgctgagtaccagagccggaggtttgggtttgaacctgcagactgctgacacggtt
atcatctttgacagtgactggaaccctcaccaggatttgcaggctcaggatcgagcccat
cgcatcgggcagcagaacgaggtgcgtgtgcttcgtctctgtaccgtgaacagcgtggag
gagaagatcttggccgccgccaaatacaaactcaacgtggaccaaaaagtcatccaggct
ggtatgttcgaccagaagtcctccagccatgagcgtagagctttcctgcaggccatcctg
gagcacgaggagcaggacgaggaggaagatgaggtgcctgatgatgagaccgtgaaccag
atgattgccagaagcgaggaagagttcgatcacttcatgcgcatggatctagaccgtcgc
cgcgaagaagctcgcaacccgaagcgcagacctagactgatggaggaggatgagcttccc
acttggatcatgaaggacgatgcagaagtggaaaggctgacctgcgaggaagaggaggag
aagatgttcggccgtggctcccgtcagaggaaggaagtggactacagcgactcgctcaca
gagaagcaatggctaaaggctatcgaggaaggaaatcttgatgacattgaggaggaagtg
cgccacaaaaagacaacccggaagaggaagcgcgaccgtgaccttgaccttccaggcccg
gccacgccaagctccagtgggcggagcagagataaagatgatgatactaagaagcaaaag
aaacgtggccgtcctcctgctgaaaaactttcacccaaccctctggctctcaccaagaag
atgaagaagaccgtggatgctgtaatcaaatacaaagacggaaacggaaggcaactgagc
gaagtgtttattcagctgccctctcgcaaggagctgcctgaatattacgagctcatccgc
aaacctgtggacttcaggaagatcaaggagcgtataaggagccacaagtaccgcagtcta
aatgacctggagaaggacgtcatgcttctgtgccagaacgctcagaccttcaacctagag
ggatcactgatctacgaggactccatcgtgctgcagtccgtgtttaccagcgtgcggcag
aagatcgagaaagaggaagagagcgagggagaggacagtgaggaggaagaggacgagctt
gatgagggatccgagtctgaatctcgttcggtgaaggtgaagattaagctgagtcgaaag
gaaaaggtggagagagggaaaggaaggcgacgaacaggccggagctcacgccctaaacct
gtcgtcagtgacgatgacagtgaggaggatcaagaagaggagcattcagctagcggcagc
gacgatgattaa
DBGET
integrated database retrieval system
