Triplophysa dalaica: 130426381
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Entry
130426381 CDS
T09616
Symbol
shank1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
tdw
Triplophysa dalaica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
FERM_f0
SH3_9
SH3_1
SAM_PNT
DUF6810
Motif
Other DBs
NCBI-GeneID:
130426381
NCBI-ProteinID:
XP_056609094
LinkDB
All DBs
Position
7:complement(11974477..12023826)
Genome browser
AA seq
2462 aa
AA seq
DB search
MTMPLSPLSSDDEHQRMLGNSQHLYPGAEEEEEEEEEEEEMDDGIDEEGEEENGEVELDD
EEEADDDDDIRRLRGGREEGHRQKGTMAGRTSGDRQMRPGNPGHAANPYSSNPGPTHQQT
GTQQQQQQQQQQQRKLRERSSSNPPEDAHIAMMVFRIGIPDIKQTKCLRFNPDAIVWKAK
QQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERPLREYPQSFEKGVPYLEFRYKTRV
YKQTNLDEKQLAKLHTKASLKKFMDYIQTGAVEKVSKLIDKGLDPNYHDPDTGETPLTLA
VQTEPGGNEGIRVLVMGGAHIDFRAKDGLTPLHKAVRTHRHTALLTLLSLGASPDYKDRR
GLTPLYHTVLIGGDTSCCETLLYHRAKLGLRDENGWDETHQACQNGNSQHLEHLLFYGAD
SSSQNASGNTALHICALYNKDSCARILLYRGASKDTKNNSGQTPFQVAVVSGHFELGEII
KNHRESDVVPFLESPKYAPQRRESGRTLGLPHPHPFLRANSDNSMNVPDWIAFPNAPGSN
IVSVQGQKHGGTLRSSSSPRGARTRSPSRGRTGDRDERSRQTRGRQGAGSISSQGTATGQ
RRRLYSAVPGRVFVATRSHSAQGDREISLNKGDKVKVLSVGEGGYWEGTVRGRTGWFPSD
CVEEVALRSLDNRSESRSERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDNEGFG
FVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGH
RQVVNMIRQGGNSLMVKVVMVTRNPDLEEGVRKKIPQQSKRLSTPAIALRSKSMTSELEE
MASGPWKKKSEFESSQATEKKRTVYQMALNKLDEILAAAQQTISTNEAPGPRVQGIKRER
GRGFYNEPSFDQSGMGMTSSGAGLGYDRGQFVSGHGPPHGMLRQKSIGVPEEEKQHLHPP
AMKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGFRGKTPQQPSVSVSQSTSSSAHYQ
LYSQSIHVTHGARDRSPGPPTGSGTGDQPLPYSHAQAHSSVPSRTASRKVIGYTGDLAGA
GGAAGAKAAALRRGYSNAVPPSSVATVIPQQQQTQQTTQSQPSRLDRNAVGAGGVPKGGG
RKGKGPLVKQSKVEDLRGGQGTLEGKGSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSVEA
EPPPPEESDSSKPQPVVPPPAPSVPPPAPPSMPAPPPPSASSLRTQESLDYTSQFGAAIV
GAARRDRERFHEARRKSASFFLSAEEELGGVGGVGGRTQTSQQQLSTQPSPRLRPSKSID
EGMFSGDTFIHHTRSMPPAFGLPEYSSPAPPGDYQPQSVPADFYGAGGRQQQQQQQQPST
TTFIHPLTGKVLDPSSPLGLALAARERALKDDGRMRRERTSEHHFTRQLSSIGAFPSSTA
QPTSHLSYSMASSSSAISSAAQSASSSSYLVTSSSLAATTTSTRPPSPRILRGAGSSWGE
ETRVGDRTEREAAGASAPREGLRVRFSEDKTVHTHHYQSQHYQPTYKERERERQRERSRE
REMEKAQTQLQQQSVQPSTQQPRRPSFLRMESEAGSYILSLTPPSPPPTVAPTRPSAGGG
GGSGSGLMVLPPPAPSVDADDEFVFAEPLPPPLEFANSFDRGLGYHSMVYNNLSARQQRH
PAPPPPPPPPPPPPPKDSFMAGFPPHTPLPSPQAGDSTTSSLTSYDSEVANLTQSAPSPS
PSSPNPLPPPSPSTLQPAALPPPPSVSPPPPPTSFHRPFGLSHSQHLYNNTHPPERSSPT
PPPHSIPAPLAYRGPPVSTPATSVSLRGSSTVTASCSSTASTTVSAMTSTAAIVTPHTRM
ATVSTVATGSSRRPSAEHHPPPSVAAAKTSESQETVVDSGIEELDSRSSSDHHLDSILAL
SGSGVRERLERAGLGSLGGSGGTTESDRTSGADFLESYMSYLDGQTFEMHNAKAASTAST
YPKTQRYREGSRAGDLRRQTSTAPPAYHRRREEEEEEDEAQEAEEEYINARDSYGMGEGP
GIARSSVMYFDRPRTPEMKPLWGEGSTGAVQSVGEGTGQAGGTYMEARKLHPPMSSMKAS
IINELNSKLHQRSKGTESWGAQKSLSRHRFSEDSTGALSPPSVRSSSPSPVQLSQPALSP
SPTPSCQPIYPNWARSPSPQPPGSSSQPPPRSHSPVSPSSYSPYPTSPKHRPVYRTKALE
FQFIPSRESRKAESHHAQRRRAPSPLISPSDRPKLGPPRPSSLPILPTTPLYSSLYDLRG
SITPPSPANPLGDPYFSPSPPLFATSGAPPPPNASLVVSRSLSPTHFLSGTSSPPLHHIP
PPTCLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPS
LTKEDYLDLGVTRVGHRMNIERALRRVMDRLSSSPFPVPALSPRDERTDRRRDEANRSRE
DR
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgctcagccccctctccagcgacgacgagcaccaaaggatgctgggaaac
agtcaacacctatatccaggggcagaagaagaagaggaagaggaggaggaggaagaggaa
atggatgatggcatagatgaggaaggagaggaggagaacggagaagtggagttggatgac
gaagaggaagcggatgatgatgatgacatcaggcgtttgaggggtggcagggaagagggg
cacaggcaaaaaggcacaatggctggacgaacctcaggagacagacagatgcggcccggg
aacccgggccacgccgccaacccttattcctccaaccctggacccactcaccaacagaca
ggtactcagcagcagcagcagcagcaacaacaacagcagcgtaagctgagggaacggagt
tctagcaacccacctgaagatgcacatatagctatgatggtgtttcgcattggcattcct
gatatcaaacaaacgaaatgtctgcggtttaacccggatgcaatagtgtggaaggcaaag
cagcaggtgctgtgtagtctgaccgaatctctacgagacgttttgaactacggccttttc
caacctgcaactgatggtcatgatgccaagtttttggaggaggagaggccgctgagagaa
tacccccaatcctttgagaaaggagtaccctacctggagttccgctacaaaaccagggtg
tacaaacagacaaatctagacgagaaacagctggccaaactccacacgaaggctagtcta
aagaagttcatggactacatccagactggcgctgtggaaaaggtatccaaacttatagac
aaagggcttgaccccaactaccacgaccctgatacaggagagaccccactcactttggca
gtacagacagagccgggtggaaatgaaggcatcagagttctggtgatggggggagctcac
attgacttcagggcaaaggatggcctgacacctctccacaaggccgtcagaacacaccga
cacactgccctactgacactgttgtctttgggcgcttctcctgattataaagaccgtcgt
gggctgactccactgtaccacactgtgctgattggaggcgacacctcctgttgtgagacc
ctcctgtaccacagagccaagctggggctccgtgatgagaatggctgggatgagacccat
caggcttgtcaaaatggaaactcacaacacttagagcacctgcttttttatggtgcggac
tcttcttcccagaatgcctcaggaaacactgccctgcacatatgtgctttatataataag
gatagctgtgctcgcattctgctgtatcgaggagccagtaaggacacaaagaacaacagt
gggcagaccccctttcaggtggctgtggtgtctggccattttgagctgggagaaatcatt
aagaaccatcgtgaatcagacgtagttccctttctggagtctccaaagtacgccccccag
aggagggagagtggccgaactcttgggttgccccatcctcacccattcctgcgggccaac
agtgataacagcatgaatgtaccagactggattgcttttcccaacgcacccggatcaaac
attgtgtctgtgcagggtcagaagcacggcggcactttgcgcagttccagcagtccccgc
ggtgcccgaacccgttccccgtcccgaggccgaacaggagacagagatgaacgaagcaga
caaacacgtggcaggcaaggggcgggctccatcagtagtcagggcacagcgaccgggcag
cggcgacgtctctatagcgccgtacctgggcgcgtgtttgtggccacccgctcgcattct
gcccagggggaccgtgagatcagccttaacaagggagacaaagtcaaagtgctgagtgta
ggtgaaggaggctactgggaggggacggttcgaggacgcaccggctggttcccttctgac
tgtgtagaggaggttgcacttcgcagcctggacaatcgctcggaaagccgcagtgagcga
gccaagcgactctttcggcattataccgttggatcttacgacagctttgatgcgcccagt
gactatataatcaaggagaaaacggtcctcctgcagaaaaaagacaatgaggggtttggc
tttgtgctgagaggagccaaggctcagacccctattgaagagtttactcccaccccagcc
tttccggcactgcagtaccttgagtctgttgacgagggaggcgtggcttggagagctggt
ctacgaatgggagacttccttattgaggtgaatggccagaatgtggttaaggtgggacac
aggcaggtggtcaacatgatcagacaaggcggcaacagtctcatggtcaaggttgtcatg
gttacccggaatcctgatttggaggaaggggtcagaaagaaaattccacagcagagcaag
agactgagcacacccgctatcgccttgcgctccaaatccatgacatcagaattggaagag
atggcctctggtccatggaaaaagaaatcagagttcgagtcttcacaagctactgagaag
aaaaggactgtttatcagatggctttgaataaactggatgagattttagctgcagcacag
caaaccatcagtaccaatgaggctccaggtccccgtgttcaggggataaaaagagaacgg
ggcagaggcttttataatgagccaagttttgaccagtccggaatgggaatgacttcatct
ggggcagggctaggctacgaccgtggtcagtttgtgtctggccacggccccccgcacggt
atgctgcgacagaagtccatcggggttccagaggaggagaagcagcatcttcatcctcca
gccatgaagtttgcacggagtctttcagtgcccggcccagatgatatccctcctccacct
actacagctccccctgagcccccattctcctcagcaccccctcttggctttcggggcaag
acaccccaacagccttctgtttctgtgtcccaatccacttcctcttctgcacattatcag
ctctactcgcagtcaatacatgtcacccatggagccagagataggtcccctgggccacca
actggatctggaacaggggaccaacctcttccttactctcatgctcaagctcactcgtct
gtacctagcagaactgcctccaggaaggtgattgggtacacaggggaccttgcaggagct
ggaggagcagcaggggccaaggcagcagcattgagaaggggctacagcaatgcagtgcca
cccagcagtgtcgctacagtaattccccagcagcagcagacccagcagactacacaaagc
caaccctccaggttggaccgcaatgccgttggggcagggggtgtaccaaaaggtggtgga
cggaaagggaagggacccttggtaaagcaatcaaaagtggaggatctgcgtggaggccag
ggcacgctggaaggaaagggatcagtggagaagagctccattcctattcccaccatcatt
gttaaagctccatctaccagcagtagtggtcgcagtagccaaggcagcagtgtggaggct
gaaccacctcccccagaagaaagtgacagttcaaaaccccaaccagttgttcccccacct
gcaccttctgttccaccgccagcgcctccctctatgcctgctcctccacctccatcagcc
tcatcacttcgtactcaagagagtttggactataccagccagtttggtgctgccatagta
ggggcagcacgcagggatcgtgaacgatttcatgaagcacgaaggaagagtgcctcattt
tttctctctgctgaggaagagttaggtggagtaggaggagtcggaggacgaacccagacg
tctcaacagcagctaagcactcagccttcacctcgcctgcgaccatccaaatcaatagat
gagggcatgttctcaggtgatacctttatccaccacacacgcagtatgcctcctgctttt
ggtttgcctgagtactcctcacctgctcctcctggggactaccagcctcagtctgtgcct
gctgacttctatggagcaggaggccgacaacaacagcagcagcagcagcaaccttccacc
acaacctttattcacccgctaacagggaaagttctagacccttcatccccactaggctta
gcgttagcggcacgggaacgtgccttgaaagatgacggacgcatgcgccgggaaaggacc
tcagaacaccactttacccgtcagttgtccagcattggagcctttccctcatccactgcg
caacccacttcacatctctcctactccatggcctcgtcttcctctgccatctcctctgct
gcccagtccgccagctcctcatcttaccttgttacctcatcctcactagctgctaccacc
acatctactcggcctccatcacccagaatcctgcgtggagcagggagcagttggggtgag
gaaacaagggtgggagatcgtacggaaagggaggccgctggtgcctctgctcccagagaa
ggtctaagggttcgattctctgaagataaaaccgttcacacacaccactaccaatctcag
cactaccagcccacctacaaggaacgtgaaagagagcgtcagagagagagatcaagagaa
agggagatggagaaagcgcagacccagttacaacagcagtcagttcagccatcgactcag
cagcctcggcgcccgtcatttttgaggatggaaagtgaggctgggtcatacatcctttcc
ctaacacctccatctccacctccaacagtggcccctacacgtccttcagctggaggagga
ggtggaagtggttcaggtttgatggttctccctcccccagctccctcagtggatgccgat
gatgagtttgtgtttgctgagcctcttcctccaccgttagagtttgccaacagttttgat
cgtggtttgggttaccatagtatggtgtataacaatctgtcagcccgtcaacagcgtcac
ccagctcctcccccaccacctcccccgccacctcctccacctccaaaagactcctttatg
gcagggttcccccctcacacacctctgccttcaccccaggcaggggattccacaacttca
agtctaacttcctatgacagtgaggttgccaacctgacccagtctgccccgtctccttca
ccatcatccccaaatcctctcccgcctccatctccctccacgttgcaacctgctgcactt
cctccacctccctctgtatcacctccacccccacccacatccttccacagaccatttggt
ctatcccattcacaacatctttataacaatacacacccgccagagcgttcctctccaacg
ccacctccccattctatcccagctccacttgcctaccgggggcccccagtatccacccct
gcaacctctgtctctctaagaggctcctcaactgtgaccgcaagctgttcctcaactgct
tctacaactgtttccgctatgactagtacggctgccattgtcaccccgcacacacgcatg
gcaaccgtctccacagtagctacaggaagtagcaggcggcccagtgcagagcatcatcca
ccgcccagtgtagctgcagccaagaccagtgagtcccaggagacagtagtggattctggc
attgaagagttggacagtcgaagcagcagtgaccatcacttagatagtattctagcacta
agtgggagtggggtcagagagaggttggagagagcagggttggggagcttaggtggaagt
gggggcacaaccgagtctgacagaacgagtggagcagactttttagaatcttacatgagc
taccttgatggacagacttttgaaatgcacaatgccaaagccgccagcactgcatccacc
tacccgaaaacacagaggtacagagaaggcagccgggccggagatctacgacggcaaacc
agcacagcaccccctgcataccacagacgtagggaggaggaagaggaggaggatgaggca
caagaggcagaggaggagtacattaatgcccgagatagctatgggatgggggaagggcca
gggatcgctcgttcctctgtaatgtactttgatcgaccccgcactccagagatgaaacct
ctttggggtgaagggtcgaccggggctgtgcagtctgtgggagagggaacgggccaggct
ggagggacttacatggaagcacgtaagctgcatcctcccatgtccagtatgaaggccagc
atcatcaatgagctaaactccaaattacatcagaggagcaaaggaacagagagctgggga
gctcagaagtcattgagcagacataggttctcggaggactccacaggtgcattgagtcct
ccttctgtccgatcttcctccccatctcctgttcagctctctcagcctgccttgtctccc
tccccgaccccttcctgccagccaatctacccgaactgggctcgatctccttctcctcag
ccccctggtagctcatcccagcctcctccccgatcccactcacccgtttctccctcttcg
tattccccatatcccacctcacccaaacatcgtcccgtgtaccgcaccaaagccctagag
ttccagtttatccccagccgcgagtcccgtaaagccgagtcccatcacgctcaacgcaga
cgagcacccagtccccttatttctccttctgaccgtcccaagcttggccctccccgtccc
tcatcgcttcccattctccccaccactcccctctatagcagcctttacgatcttcgtggt
tccatcactccaccctcgcctgcaaatcccctcggggacccctacttctccccgtctcct
cctctctttgccacctcaggtgctccgccgccaccaaatgcctctctggttgtctctcgc
tccctttcccccacccacttcctgtcagggacttcctccccgcctctccatcacattcct
ccacccacttgcctgagttacccccacctccctcccccttcacccaccaagccctttgcc
tctaaaccacttccatactggaccaagtacgacgtggctgattggctgggttatctgaac
ctgggtgagcacagggagcgttttctggacaacgagatagatggcacacacctgccctct
cttaccaaggaggactacctggacctgggtgtgaccagggttggccatcgcatgaacata
gagagagcactgaggagagtgatggacaggctgtcttctagccctttccccgttcccgcc
ctctcccctcgagatgaacggacagacagaaggagagatgaggccaaccggagccgagag
gacaggtga
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integrated database retrieval system