Triplophysa dalaica: 130426565
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Entry
130426565 CDS
T09616
Symbol
grin2ca
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tdw
Triplophysa dalaica
Pathway
tdw04020
Calcium signaling pathway
tdw04080
Neuroactive ligand-receptor interaction
tdw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130426565 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130426565 (grin2ca)
04082 Neuroactive ligand signaling
130426565 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130426565 (grin2ca)
Ion channels [BR:
tdw04040
]
Ligand-gated channels
Glutamate (ionotropic)
130426565 (grin2ca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
130426565
NCBI-ProteinID:
XP_056609391
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All DBs
Position
7:6363030..6407695
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AA seq
1398 aa
AA seq
DB search
MGVYLGCLSDTLWLPLLLLLLSVSSVPRCQGRPYRTVEPTVNVVVVFSGSSYQVEIKGRL
SRENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDF
ISTQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVVTS
LYPGYDTYIYYIRSFIDTSYFLWELQDILTFDMSADGMNDVRARRLLQQIDAQVLLVYCS
HDEAQYLFTMAREVGLVGPGYIWFITSLAVGNPNMHPPDSFPIGLISIITDRWKMSMRNR
VRDGVAIVVKGVESFRKHRGFIPDGHMDCQSTVQPAKNDTLYRHMLNVSWENTDFSFNSD
GYLVNPSMIIITLDRSRQWDKVGNYEFGILQMRYPVWPRYGTYLEPVSDNRHLTVATLEE
RPFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNI
KFSYDLYLVTNGKHGKLVRGVWNGMIGEVFYRRADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNSSLVSA
KDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAA
FMIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHAHMVKYNQK
GVEDALNSLKSGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRW
KRPIDLALLQFLADGETQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLS
LLVFAWEHLLYWKLRHSVRRSERLDFLLAISRGIYSCYNGVEDTDRNGNLQNPDVTSSYT
QANMLKMLQTAKDIVSSTRVENSLDNATKTIENWSRRDPESARPSLPTCLIGTDFSHNRL
PCISSVTDNPSSYPQNVDSTAQHLLENPHVGIRPTSLRYTLPTRTSQHHIYERALPISSL
STPHIAMRDPPPLTAPKPHMYVDPSCHHPTSRYIPYRDFQVPDIFVEQQEXSGSHKQYKA
GLSRQKRSHSYVAASPETRRRDDYDVPQSCLADLKCNHLVENHSHTTPCMRSHYQRTTSS
CNSCTKLYLEPDMEDIPLLGKDKINRRASFLRATWGGDRIRQVDEKPTTSASSSNMPDLF
PRVLVTNPKPSKMYGSAGNNLRYNMAVEPAYLDPAHMGSYPYKPQKIKYSTSIRLPSYRE
AILQNTAALRRSSSTLVHGHYSTYLNSYTDLPMYLGPLPXGPTHFHDHSKDMCHLFPCVN
HCPDNAALVPRLGTRHTAYQSTAMGGYEGPGRSNEQLLHTVPVSSVRRDRRQVLVARNVH
SPYAPRPWGRVSSLESEV
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtttatctagggtgtctcagcgacacactgtggctgccattgctgctgctgctg
ttgtccgtcagctccgtaccccgttgccagggccgaccgtacaggacggttgagcccacc
gtgaacgtggtggtggtcttcagcggctcctcctaccaggtggagatcaaaggtcgactg
agtcgggagaacttcctggacctgccgctggaggtgaaccccatcaccgtgctggtgaac
aacaccaatccgcgtaccctactgactcgcatctgcgacacgctggctgctaacagggtg
cacggagtggtctttgaagataacattgggtcggaggcagttgcgcagatcctggacttc
atctcgacgcagacggcggtgcccatagtgggcatcagcggggggtctgctgttgtctta
ccgcacaagggtgacggctctacgttccttcagctgggttcttccattgaacagcagatc
aatggcatgtttaaggtgatggaggagtacaactgggacagttttgtggtggtgaccagc
ttgtacccgggctacgacacgtacatttactacatccgctcctttatcgatacttcctac
ttcctgtgggagctgcaagacatcctaacgttcgacatgtccgcggacggcatgaacgat
gtgcgagcccgtaggttacttcaacagatcgacgctcaggtgcttctggtttactgctcg
cacgatgaagcccaatacctgttcaccatggccagggaagtgggattggtcggtccaggt
tatatttggtttattacaagcctggctgtgggaaaccccaacatgcatccaccagacagt
tttcccatcggattgattagtataatcacagatcgctggaaaatgagcatgcggaacagg
gtcagggatggtgtggcaattgtcgtcaaaggagtggagagcttccgcaagcataggggg
tttattcctgatggacacatggactgtcagagtacggttcagccggctaaaaatgacact
ctttacaggcacatgctgaatgtgtcgtgggagaacacagacttttccttcaacagtgat
ggatatctggtcaacccctcaatgatcataatcactctggaccgcagcaggcagtgggat
aaggtgggaaattatgagtttggtatactgcaaatgagataccccgtctggccacgttat
gggacttacttggagcctgtgtcggataatcgtcacttaacagttgccacgttagaggaa
aggccttttgtcattgtagaagcagtggatccagtcactggcacctgcctcagcaacact
gttccctgcagacgccaatcaaacaagacagaaacgattgttggacacaccgagccctac
accaaactctgctgcaaaggcttctgcattgacattctgaagaaactctcacgcaacatc
aagttctcctacgacctctacctggtcaccaacggtaaacatggaaaactcgtacgtggg
gtttggaacggcatgatcggagaggtgttttatagaagagcagacatggccatcggctct
ctcaccataaatgaggagcgctctgagatcatcgacttctctgtgccgtttgtggagact
ggaatcagtgtgatggtggccagaagcaatggaacagtttctccatccgctttcctggag
ccatacagcccggccgtgtgggtgatgatgtttgtcatgtgtcttactgttgttgcaatc
actgtgtttgtgttcgaatacttcagccctgtgggctacaacagcagtctggttagtgcc
aaagatccaggtggaccaacattcaccatcggaaagtcagtctggctgctgtggggaatc
gtctttaacaactcagtgcccattgaaaaccccaagggcactaccagtaagatcatggtg
ctggtgtgggccttcttcgccgtgatcttcctggccagctacaccgctaacctggcagcc
tttatgatccaggagcaatacatcgacactgtgtccgggctgagtgacaaaaaattccag
aagccacaagaccagtatcctccattccgattcggtacggtgcccaacggcagcacagaa
cgaaacatccggagcaactatccagagatgcatgctcacatggtgaagtacaaccagaaa
ggtgtagaagacgccctcaacagcctcaaatcagggaagttggatgccttcatatacgac
gcagctgtgctgaactacatggctggtaaagatgaaggatgtaaacttgtgactatcggt
agcgggaaggtgtttgcaactacaggttacggtatcgctcttcagaaagaatctcggtgg
aagcgacccattgatcttgctcttctccagttccttgctgatggtgaaactcagaagctc
cagaccgtgtggttgactggcatctgtcgtaatgagaaaaaagaggtgatgagttctaaa
ctcgacatcgacaacatggccggagtgttttacatgcttctggtggccatgggtctcagt
ctgctggtctttgcttgggaacatctgctgtactggaaactgagacattctgtccgcaga
tctgaacgcttggatttcttattggccatcagcagggggatctacagttgttataacggt
gtggaggacacagaccgtaatgggaacctgcagaacccagatgtcacctccagctacact
caggccaacatgctgaagatgctccagacggccaaagacatcgtctcttccacgagagtg
gaaaactctttagacaacgccaccaagaccatcgagaactggagtcgcagagacccagag
tccgccagaccaagtcttcccacatgcctcataggaactgacttcagccacaatcgcctc
ccctgcatatccagcgtaacagacaacccttcctcttaccctcagaacgtggacagcact
gctcagcacctgctggagaaccctcacgtggggatacggcctacctcactgcgctacacc
cttcccacacgaaccagccaacatcacatttacgaacgagcactacccatatctagcctc
agcactccccacatcgccatgagagacccgccacctctgacggccccgaaaccccacatg
tacgtggatccgtcctgtcaccaccctacctctcgctacatcccgtaccgtgattttcag
gtaccggacatcttcgtggagcagcaggaancttcgggaagccataaacaatacaaggca
ggtctcagtcgacaaaagaggtcccacagctatgtggcggcgtctccagagactcgacgg
agggacgactatgacgttccccaatcctgtctggccgatcttaaatgcaaccatctcgtg
gaaaaccattcccacaccacaccctgcatgagaagccactaccagagaacgacgtcaagc
tgcaactcctgcacaaagctgtatctagaaccagacatggaagacattccgcttctgggg
aaggataaaatcaaccgccgcgcctcttttctcagggccacgtggggtggcgaccgcatc
cggcaggtggacgagaagcccaccacctctgcgtcttctagcaacatgcctgaccttttc
ccgcgagttttagtgacaaatcccaagccttcgaagatgtacgggagcgccggcaacaat
cttcgttacaacatggcggtggagccagcctatctggaccccgcccatatgggctcctac
ccgtataaaccacagaagatcaagtactcaacgtccatccgtcttccatcataccgggag
gcaattctacagaacacggcagccttgcgtcgttcctcctccacactagttcacggacac
tattcgacgtacctgaactcgtacactgacctgccgatgtacctggggcctttaccgnca
ggacccacccatttccacgaccactccaaagacatgtgccacttgtttccctgcgtaaac
cattgcccagataacgccgccctggtgcccaggttaggcaccagacacacggcgtaccag
agcacagctatggggggctacgaggggcccgggcgctcaaatgagcagttgctgcacacc
gtgccagtgtcttctgtgcgtagggaccgcaggcaggttctagttgcacggaatgtacac
agtccctacgccccgaggccctgggggagggtgtctagtctggagtcagaggtgtga
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