Triplophysa dalaica: 130426571
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Entry
130426571 CDS
T09616
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130426571 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130426571 (ddx5)
03009 Ribosome biogenesis [BR:
tdw03009
]
130426571 (ddx5)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130426571 (ddx5)
Spliceosome [BR:
tdw03041
]
Complex A
U1 snRNP components
U1 related factors
130426571 (ddx5)
Complex B
130426571 (ddx5)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
Pre-60S particles
Helicases
130426571 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130426571
NCBI-ProteinID:
XP_056609401
LinkDB
All DBs
Position
7:complement(5827956..5832898)
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AA seq
614 aa
AA seq
DB search
MPGYSDRDRGGRDRGYNSGPPRFGGSRNGPPQGKKFGNPGDRLRKKHWNLDELPKFEKNF
YQEHHEVSRRTPQDVENYRRSKEITVKGRELPKPIMKFHEASFPNYVMDVIHKQNWTEPT
PIQGQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLAPTRE
LAQQVQQVAADYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYV
QINVGALQLSANHNILQIVDVCNDGEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDDLT
RRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDY
PNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAQDLVSVLREANQAINPKLIQMAEDR
GGRSRGGRGGGFRDDRRDRHTGGRRDFNSYSQDGRNNDSYGQKKTFNSKPQNGSSSYNSG
GNFNGGYGSNGQSNFGGGGQPSAYGNQGYQSQQFGANQGGVQNGMSHPPQFPPFNPQQMP
QSMPFPMPPPAFPQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatattcagacagagaccgcggtggccgcgacagaggatacaacagtggtccc
ccacgttttggtggaagccgaaatggacctcctcaaggaaagaagtttgggaatccaggt
gaccggctgaggaagaaacactggaacctggatgagcttcctaaatttgagaagaacttc
taccaagagcaccatgaagtttctcggcggacacctcaagacgttgaaaactacagaaga
agcaaagaaattacagtgaagggaagagagctcccaaaacccattatgaagttccatgaa
gcaagtttcccaaactacgtaatggatgtgatccacaaacagaactggactgaaccaacc
cccatccaaggtcaggggtggccagtagcactaagtggtaaagacatggtgggcattgca
cagacaggatctgggaaaaccctttcgtacttgctacctgctattgtgcacataaaccac
caaccattcctggaacatggtgatggcccgatttgtttggtgttggctcccactcgtgaa
ctggcacagcaggtccagcaggtggcggcagactacggcaaagcttctcggctcaaatct
acctgcatctatggaggagctcccaagggaccacaaatccgggatctggagaggggtgtt
gaaatctgcattgccactcctggtcgcctaatcgatttcctggaggttggaaagacaaat
ctgcgcagatgcacctatcttgttcttgatgaggctgacaggatgctggacatgggtttt
gaaccccagattcgaaaaattgtggaccaaattagaccagaccgacaaactctgatgtgg
agcgccacatggccaaaagaggtgcggcagctggccgaagactttcttaaagaatatgtc
cagatcaatgttggtgcccttcaactcagcgccaatcacaacatcctacagattgttgat
gtttgcaatgatggagaaaaagaggacaaactgctgcgccttttggaggaaattatgagt
gaaaaggagaacaagactataatttttgtggagaccaaaagaaggtgtgatgatctcacc
aggagaatgcgcagggatgggtggcctgcaatgggtatccatggagacaagagtcagcag
gaaagggactgggtcctcaatgagtttaaattcggcaaagcccccatcctcatcgccaca
gacgttgcctccagaggcctagatgttgaggatgtcaaatttgtcattaactatgactac
cccaacaattctgaggactacattcaccgcattggccgtactgctcgcagccagaaaact
gggacagcctacacgttctttacaccaaacaacatgaaacaggcacaggacctcgtctct
gtccttcgcgaggccaatcaagccattaaccccaaactcatccagatggccgaagacaga
ggaggtcgttcaaggggaggtcgaggtggagggtttagagatgaccgtcgtgatcgccac
actggcggcagacgggatttcaacagctatagccaagacggccgcaacaatgactcttac
ggacagaagaaaacgtttaacagtaagcctcaaaacgggtctagcagttacaacagcggt
ggaaattttaacgggggttacggcagtaatggacagtcaaacttcggtggtggcggtcag
cctagtgcctatggaaaccaaggttatcagagccagcagtttggtgccaaccaaggggga
gttcagaatggcatgagccaccccccacaattccccccctttaacccccaacagatgcca
cagtctatgccctttcccatgccccctcctgcattcccacagtaa
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