Triplophysa dalaica: 130426730
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Entry
130426730 CDS
T09616
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03440
Homologous recombination
tdw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130426730 (top3a)
03460 Fanconi anemia pathway
130426730 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdw03032
]
130426730 (top3a)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130426730 (top3a)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
130426730 (top3a)
DNA replication proteins [BR:
tdw03032
]
Eukaryotic type
DNA Topoisomerases
130426730 (top3a)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
130426730 (top3a)
FA (Fanconi anemia) pathway
130426730 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
130426730
NCBI-ProteinID:
XP_056609622
LinkDB
All DBs
Position
7:complement(16608662..16614724)
Genome browser
AA seq
1004 aa
AA seq
DB search
MNILHRLLFRLTVHCRFRRQISVSMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRRE
GYSVYNKIYEYEYTLFGQNVTVSMTSVSGHLLGLEFKAPFQKWHSCNPVLLFDTEVEKYC
PDNFVAIKRTLEREVKQCQALVIWTDCDREGENIGFEIINVCKAVKPNIQVFRARFSEIT
PNSIRRACETLTEPNINISDAVDVRQELDLRIGASFTRFQTLRLQKIFPGSLSDQLISYG
SCQFPTLGFVVERFKAIQAFVPETFFKIKVVHEPNEEESVEFGWKRHRLFNHTACLVLYQ
MCMEDPIAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKIAEKLYTQGFIS
YPRTETNMFPQNLNLTPLVEQQTQDNEWGNFAQRILDSGGPTPRNGNKSDQAHPPIHPTK
YTNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVIVEIEIAQERFSASGLTIIARNYLEVY
PYDKWYNKVIPLYEPNTTFQPTAVEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEH
IETIKSRMYVGLTSDQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKD
KASVLSYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEFTEQEQEQLEIPLPVRKCPQC
NRDMVLKKKKDSTGMFLSCMGYPACKAAVWFPDTVLEVSRDESVCPTCRPPPVHMLKFKF
KRGSLPHMMPLEFVGCIGGCDETLREVLNLKYLRGGDGDSNSRTNNNSTSHQPRAQRTNS
APPSRVENSRPPAPRPRADSNRPTASLPPPQPPAQGGAIVCNCGMDAVLLTVRKDGPNQG
RQFYKCNTGDCKFFLWADQPAEQGSPGGSRGPLNQTSQPPRPSVGFGNVAQQQQNNRGSG
SNEGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWANENVPPATDFPEG
NNGNRGGNKKTSTLSNKPPAAKRQRTCGICHEPGHTRVTCPQGQ
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttacatagattactgttcagattgacagttcactgcagatttcgacggcaa
atatctgttagcatgataagacgaactcagataaagaaagtactttgtgttgctgagaaa
aacgatgcagctaaagggatagcagagattatgtcaaatgggagatcaagaaggagagag
ggatattctgtttacaacaaaatatatgagtatgaatacaccctatttggacagaatgta
actgtatccatgacgtcagtatcagggcatctattgggacttgagttcaaagcccctttt
cagaaatggcatagctgtaatcctgtgctgctgtttgatactgaggtggaaaagtactgt
cctgacaactttgtagcaattaagaggacactggaacgtgaggtgaaacaatgccaagct
ttagtcatttggactgattgtgatagagaaggagagaatattggctttgagatcatcaat
gtttgcaaagcagtgaagccgaacattcaggtctttcgtgcacgattctctgagatcact
ccaaattctataaggagagcttgcgagacacttactgaaccaaatattaacatcagtgat
gcagtggatgtgagacaagaacttgatctccgtatcggggcatcatttacaaggttccag
acattacgcttacagaagatatttccaggatctctctcggatcagctcatcagctatggc
agttgtcagttccctactcttggctttgtggtggagaggtttaaagccattcaagccttt
gtccctgaaacgttcttcaaaattaaagttgttcacgagcctaacgaagaggaatcggta
gaatttggctggaaaagacatcgacttttcaaccacacagcatgccttgtgctttatcaa
atgtgcatggaggatcccatagcgaaagtgatatctgtaacaagtaaaccaaaaagcaaa
tggcgacctttaccccttgacacagtggaacttgaaaaactggcttcaagaaaattgagg
atcagtgcaaaagaaacaatgaaaatcgcagaaaagctgtacactcaagggtttatcagt
tatcctcgcacggagaccaacatgtttccacagaacctgaaccttacgccactcgttgag
cagcagacacaagataatgaatggggaaattttgctcagcgcattttggacagcggtggg
ccaacacctcgcaatggaaacaaatcagatcaggcccatccccccattcaccccaccaaa
tacactaacagcttacagggaaatgaaaaacggttatatgagttcatcgtgcgtcacttc
ctggcctgttgttccaaagatgctcagggtcaggaggtgatagttgaaattgaaattgcc
caagagagattctccgctagcggacttacaatcatagcaaggaattatctggaggtgtat
ccctatgacaagtggtacaataaggttattcctttatatgaacccaatacaacattccag
ccgacagcagttgagatggtggaaggacagaccagtccaccacagcttttgacagaggcg
gatttgatttctcttatggaaaagcatggcattggcaccgatgcaacgcatgctgaacac
attgagaccataaaaagccgcatgtacgttggactgacgtctgaccagaggttccttcct
ggagagcttggcatgggtcttgttgaggggtacaactcaatgggctatgagatgtctaag
cctgacctgagagcagaactggaggcggaccttaaacttgtctcagagggccgtaaggac
aaagcgtctgtcctcagctaccatgtggcaaaatacaaggctgtttttattgaatctgtg
aggaaggcgaagaaattggatgaagctttgtctaattacttgggtccggctcaagagttt
acagaacaggagcaagaacagctagaaatacccttaccagtacgaaagtgtcctcagtgt
aaccgtgacatggtgttgaagaaaaagaaagacagcactggaatgtttctttcatgtatg
ggatatcctgcctgtaaagcagccgtgtggtttccagacacagtactggaggtcagcaga
gatgagagcgtctgtccgacgtgccgtccacctcctgtgcatatgctaaagtttaaattc
aaaaggggaagcctgccacacatgatgccccttgaatttgttggatgtatcggaggatgt
gacgagactctgagagaggtcttaaatttgaagtatctcagaggaggagatggagattct
aactctcgaacgaacaataactcgacatcccatcagcctcgtgcacaaagaaccaactcg
gcacctccgtccagggtggagaacagtagacctccagcacccagacccagagctgacagc
aacagaccaacagccagtctgccacctccgcaacccccagcccagggtggtgccattgtt
tgcaactgtggcatggatgcagttcttctcacagttcgcaaagatggtcccaatcaagga
cgtcagttttacaagtgtaacacgggggattgtaagttttttctgtgggcagatcagccc
gctgagcagggatcacccggtggaagcagaggacccctaaatcagacgtcgcaacccccc
aggccctcagttggctttggaaatgtagctcaacaacagcaaaacaacagaggatctggc
agcaatgagggtgaaactatgtgtaactgcaatgagcctgctgttacccggacggtcatg
aaagacggtccaaacaagggccgcatgttccacacctgtggaaaaccacgtgatcagcag
tgtggcttcttccagtgggcaaatgagaatgttcctccagccacagattttccagaagga
aacaatggtaatcgtggcgggaacaaaaagaccagcactctctccaacaaacctcctgct
gccaaacgtcagagaacctgtgggatatgtcatgagcccggtcatactcgggtcacctgt
ccccagggccagtaa
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