Triplophysa dalaica: 130426732
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Entry
130426732 CDS
T09616
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00260
Glycine, serine and threonine metabolism
tdw00630
Glyoxylate and dicarboxylate metabolism
tdw00670
One carbon pool by folate
tdw01100
Metabolic pathways
tdw01200
Carbon metabolism
tdw01230
Biosynthesis of amino acids
tdw01240
Biosynthesis of cofactors
tdw04981
Folate transport and metabolism
Module
tdw_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130426732 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130426732 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130426732 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
130426732 (shmt1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130426732 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Phage_TTP_13
SHCBP_N
Motif
Other DBs
NCBI-GeneID:
130426732
NCBI-ProteinID:
XP_056609624
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Position
7:complement(16619859..16623493)
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AA seq
481 aa
AA seq
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MAQINGHDDVTWKSHNNMMLEPLGTNDPEVFDIIKKEKRRQTYGLELIASENFASRAVLE
ALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQERALKVYGLDPEKWGVNVQPYSGSPA
NFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGYIDY
DRLAENARLFHPKLIIAGTSCYSRNLDYSRMRKIADENGAYLLADMAHISGLVAAGVIPS
PFEYSDVVTTTTHKTLRGCRSGVIFFRKGVRSVDAKTGKETLYNLESLINQAVFPGLQGG
PHNHAIAGVAVALKQALTPEFKTYQLQVLANCKALAAMLMEKGYKIVTGGSDTHLILVDL
RPNGSDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGSPALTSRGLLEDDFRKVGE
FIHQGIELTLEIQRNMNPKATLKEFKDELAKNEKHQVNISKLRKAVEDFAGKFPMPGLPE
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcaatggccatgatgatgtaacatggaaatcacacaacaacatgatgttg
gaacctctcggcacaaatgatcctgaggtttttgacataataaagaaagagaaaaggagg
cagacatatggattagagctcattgcttctgagaacttcgccagtcgagctgttttggaa
gctctgggctcctgcatgaacaacaagtactctgagggttatcctggacagagatattat
ggaggaacggagcatgtggatgaattggagcgtctgtgtcaggagagagcgttgaaggtt
tacggccttgacccagaaaaatggggagtgaatgttcaaccttactctgggtcacctgca
aactttgctgtgtacaccgctatagtggagcctcatgggcgcataatgggcctggatttg
cctgacggcggccatctcacccatggattcatgactgacaaaaagaaaatctcagccacc
tccattttctttgagtctatgccttataaggttaacccagaaactggatatattgattat
gacagacttgcagagaacgctcgcctcttccatcccaaacttatcattgcaggcacaagc
tgctattcccgtaacctggactacagtcgcatgagaaagatagcagatgagaatggagcc
tatcttctggccgacatggcccacattagtggtttggttgcagctggagtgattccctct
ccgtttgaatacagtgatgttgttaccactactacccacaagaccctgaggggttgcaga
tcaggcgtcatattcttcagaaaaggagtgcgcagtgttgatgcgaagacaggaaaggag
accctgtataatctggagagtctcattaaccaggcggtgtttcctggactgcagggtggc
cctcacaatcatgccattgcaggagtggctgttgctttaaagcaagctctgaccccagag
ttcaagacctatcaattgcaagttctggctaattgcaaggctttagcagctatgctaatg
gaaaagggatacaaaatagttacaggtggctccgatactcatctcatcttggttgatttg
cgtccaaacggatccgatggaggaagggcagagaaagtcctggaggcgtgtgcgatcgcc
tgcaacaaaaacacctgcccaggtgataaaagtgcattgcgaccaagcggccttcgttta
ggatctcctgctcttacgtcccgagggctgctggaggatgatttccgcaaagttggcgag
ttcattcaccaaggcatcgagttgacattggagatccaaagaaacatgaatcctaaagca
actttgaaggagtttaaggatgaattggctaaaaatgagaagcatcaagtaaatatcagc
aaacttcgaaaggcggtggaggattttgctggaaagtttccaatgcctgggttgccagaa
ttataa
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