Triplophysa dalaica: 130426733
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Entry
130426733 CDS
T09616
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130426733 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130426733 (cpsf4)
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130426733 (cpsf4)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130426733 (cpsf4)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130426733 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
130426733
NCBI-ProteinID:
XP_056609626
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All DBs
Position
7:16635525..16637869
Genome browser
AA seq
271 aa
AA seq
DB search
MQELIACVDHIKFDLEMAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPP
LQQQVQSQQRQQNTQPTNRSSQSLIQLTNPNVNINNHQRMPNAVGIVQHNSNMGGSRGPR
PLEQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaattgcctgtgtcgatcacatcaaatttgatctagaaatggctgtagag
cagcagctaggtgctcaaccattgccttttcccggaatggataaatcgggtgctgctgtg
tgtgagttcttcatgcgagctgcctgtatgaaaggtggaatgtgtccattcagacatatc
agcggagaaaagactgtggtttgcaagcactggcttagaggattatgcaagaagggagat
caatgtgaatttttacacgagtatgatatgacaaagatgcctgagtgctatttctactca
aaatttggagagtgcagtaacaaagagtgtccattcttacacattgacccagaatctaag
attaaagattgcccatggtatgataggggtttttgtaaacatggtccggattgcaggcat
agacacacaagaagagtaatctgtgtaaattaccttgttggtttctgtccagaggggaag
tcatgcaagtttatgcacccgagatttgaacttcctatgggtgcaactgaacagccacca
ctgcagcaacaagtacagtcccaacaaaggcaacaaaacacacagcccacaaacagatca
tcacagtcactcattcagttgacaaaccccaatgtaaacataaacaaccaccagagaatg
ccaaacgctgttgggatagtgcagcataatagtaacatgggtggatctcgtggtcctcgt
ccactggaacaagttacatgttacaagtgtggtgaaaaaggccattatgcaaacaaatgc
actaaaggtcacttggctttcctgagtggacagtaa
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