Triplophysa dalaica: 130427075
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Entry
130427075 CDS
T09616
Symbol
aff3
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130427075 (aff3)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130427075 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
130427075
NCBI-ProteinID:
XP_056610083
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All DBs
Position
8:complement(10902863..10917737)
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AA seq
1219 aa
AA seq
DB search
MPTVYGSKGKLSSICFMLQHASQDMTQSWPYQQPPEEGGNQHFLYSHSKEGKQSNSRHRH
VRDGVSLRVPSRPHVAPHKSMLADDLKLSSDEDNRDEGSEQTTSWAENDRLSSRQQRTHT
HGGRVRHSSSGSSGSDSSSEWESGSHRSRSPSPRTRTQYGSPTRQQNLNCSTESPPSTQW
QLDRWLEKVPKKLTDHDPGGGRRRSAKSDCGRGPSPGKYWSKDSESRQDYSPCDSPVPSP
QFQYSPRNSPHASPEYSPCPSPGISLVPSPVPSVCPSPGESLRESRSPSPLPPHPPRSPS
PCFTSSGIPTQDCLTYPQVTQQESPRHTARLTVASNPSHRPKVRPWVPPDHNTDQRKGSR
PKDSRSKDTRPGPPLQHHSKHSLPENSCKNRRHKPEAKGSESTIKQKFNPTSNPKNQSKL
NSRPSLSPKQQGKHSSTTNHSVHNHRTSEPTGVSINRSTSKSGHSSHFNTSKSSDRGPTL
KPKDSSRDRVNSQSSHSSNSSSKSKHFSETKQSSSKPNSETSSSPRPKVKLADARVPRSG
HPQKHSNPRESEREVDSRGKAQGVPLVPTGKEPRQRRLAEEQLTRRRWVQSSDEDEEVRR
TEEGERERKRRRTREHETEWQAVQPKQRPHTNSQHHLSVDSNRLNPEEQRRKKRRQSNED
LSSRTHVIDSSPSPPLSPPSPTPVIQPKPPSSSSSSSSSSSSSSSSESDSESSPPRNVAK
VPADSTSGQKRHNKQNSGAGGQSNKSSLSTPEADKRGRGRHKLYTLVPFGRSENSPTISN
RGLRNLLVRIDLSLLARVPDTHEVTERHSSSSLSSGKIKEKTAMRHLHYPEQLPGDGRCK
RKAENGEVQRDNKRTPAHTDKLSVSENRDTGETCTDNKQNGCQEDYFYAKRPLSPLSPSD
PVECLKPSVKAQHTEKNHTPPGKASPAQKTRVPKMQPKVEMECVGLSGQPQPISGSRVPP
PNLPPHYRGTVPISDVSHHTEYYMHEAKRLKHRADAMVDKLGKAVNYVDAALSFMECGKA
MEEGPLESKSPYAMYAETVELIRYAMRLKSHAGPGASQEDKQLAVLCFRCLALLYWQMFR
LKKDHALKYSKVLLDFFKSSPKTPQKPPPWNDSGKGSVPPASICSVNIMGPHTGSSPGNV
ISIPHRIHQMAANHLNITNSVLYSYEYWEMADTLAKENKEFFNYLNTLTGPLTLHSSMAH
IVQYTRQGLQWIRISANLS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtttatggaagtaaggggaaactttctagtatttgtttcatgcttcagcac
gcgtcccaggatatgacccagtcctggccttaccagcagcccccagaggaagggggtaat
caacatttcctgtactcacactcaaaggaaggaaagcagtccaattcccgtcacagacat
gtgagggatggtgtctctttgagggtcccttcacgtccgcacgtggcccctcacaaatcc
atgctcgctgatgacttgaagctcagcagcgacgaggataacagggatgagggaagtgag
caaacaacttcttgggcagagaatgaccgattgtcaagccgccagcagcgcacacacaca
catggcggacgggtgagacattctagctcagggtcgtcgggatccgactcctccagcgag
tgggaaagcggtagccatcgatcacgcagcccgagcccaagaacgcgtacccaatacggg
tcaccgacccggcagcaaaatctaaactgcagcacagagagtccgccgtctacacagtgg
cagctggacaggtggcttgagaaagtccccaagaaactgactgaccacgacccaggagga
ggacgacgccggagtgcaaaatctgactgtgggcgaggaccttcaccaggaaaatactgg
agcaaagactctgagtcaagacaggattacagtccatgtgacagtccagtcccgagtcca
caatttcagtatagccccagaaacagtcctcatgccagccctgaatatagtccttgcccc
agtccaggaattagcctcgtgccaagtccagtgccaagtgtgtgcccgagtccaggagag
agcctcagagaaagtcgaagtcccagtcctttaccaccacaccctcccagaagccccagt
ccatgtttcacatcctccggaatacccacccaagattgcttaacatatcctcaggttact
cagcaggaaagtccaaggcataccgcacgactaactgttgcctccaatccatcgcatcgt
cctaaagtcaggccatgggtgcctccagaccataacactgaccaaagaaaagggtctaga
cccaaagactctagatccaaggacactagacctggtcctccgctccaacatcattccaaa
cacagcttgccggaaaactcatgcaaaaaccgtcgacacaagcctgaagccaaaggttct
gaatccacaatcaagcaaaaatttaacccaacttctaacccaaagaatcaatcaaagctg
aactctagaccaagtcttagcccaaaacaacagggtaagcactcttctacaaccaaccat
agtgttcataatcacagaaccagtgagcctacaggagtatcaatcaaccggtcaacttcg
aaatcagggcattcatcccattttaatacttctaaaagctctgaccgtggtcccacctta
aaacccaaagactcgtccagagaccgcgtaaacagtcaatccagccacagctcgaactct
agctccaagtctaaacatttctcggagaccaagcaatccagttctaaaccaaactccgaa
acaagttccagcccaagacccaaggttaaacttgccgatgcccgagtgcccagatctggg
cacccacaaaaacattcaaatcccagagaaagtgaacgggaggtggacagccgaggtaaa
gcccagggagtacccctggtgccgaccggcaaggagccgagacaaaggagactggcggag
gagcagctaacaaggcgccgctgggttcagagttctgacgaagacgaggaggtcaggaga
acagaggaaggggaaagagagaggaaaaggagacggacgagggagcatgaaactgaatgg
caggcagtgcagcccaagcaaagacctcataccaacagccagcatcacctttcagtggat
tccaacagactaaaccctgaggagcagaggaggaagaaaagaaggcaaagcaacgaggac
ctttcttcacgtacgcatgtaatagactctagcccttcccctccattgtctccaccctct
cctactcctgtcatccagcccaagcctccatcatcttcctcatcctcatcttcctcgtca
tcttcatcgtcttcctctgagtcagattcagagtcaagtcctccacgaaatgttgccaaa
gttcctgcagattctacatcaggccaaaagagacacaacaaacagaactcaggtgcaggg
ggtcaatccaacaagtcaagtttaagcaccccagaagcagataaaaggggtcggggcagg
cacaaactctacacacttgttccttttggccgttctgaaaattctccaaccatctcaaat
cgaggcctgaggaacctattagtgaggatagacctctcactcctggccagagtcccagat
acacatgaggttacagagagacattcgtcttcatctttgtcatcaggaaagataaaagaa
aagacagcgatgagacatctgcactacccagagcaactgcctggtgatggcagatgtaaa
agaaaagctgagaatggagaagttcagagggacaataagagaactccagctcatacagac
aagctttctgtgtcagaaaatagagatactggagaaacttgcactgacaacaaacaaaat
ggatgccaggaagattacttttacgcaaagaggcctttgtccccattgtctccatctgac
ccagtggagtgtttgaagccctcggtgaaagcacagcatacagaaaagaaccacacacct
ccaggaaaagcttcaccagcccagaaaacacgggttccgaagatgcagcctaaggtagag
atggagtgtgtcgggctttcaggacagccacagccaatctctggatcccgggttcctccc
ccaaaccttcctccgcactacagaggaactgtacctatcagtgatgtctctcatcatacc
gaatactacatgcatgaagccaagaggttgaaacatcgagcagatgcaatggtggataag
ttaggaaaagctgtgaattatgtggatgctgctttatcatttatggagtgcggtaaagcc
atggaagagggaccactggaatccaagtctccatatgctatgtacgctgaaactgtggag
ctcatcagatatgcaatgagactcaagagtcatgcaggtcctggagctagccaggaggac
aaacagctagctgtactgtgtttccgctgtcttgctctcctttattggcaaatgtttcga
ctcaagaaggaccatgctttaaaatactctaaagtcctgctagacttctttaagagttct
ccaaaaacacctcaaaaaccccctccctggaacgattctggaaagggatctgtacctcct
gcctctatttgctctgtcaatataatgggacctcatacaggcagctcaccaggcaacgtt
atcagcattccccatcgtatccaccagatggcagcaaaccacctcaatattaccaacagt
gtgctgtacagttatgagtactgggagatggctgataccctagccaaagaaaataaagaa
ttttttaactatttgaacacactgactggacctttgactctgcacagcagcatggcccat
atcgtccagtataccaggcaggggctgcagtggatccggatcagtgctaatctatcatag
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