Triplophysa dalaica: 130427122
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Entry
130427122 CDS
T09616
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tdw03037
]
130427122 (ift88)
Cilium and associated proteins [BR:
tdw03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
130427122 (ift88)
BRITE hierarchy
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_19
TPR_14
TPR_16
TPR_7
TPR_11
ANAPC3
TPR_17
TPR_9
TPR_10
RPN7
TPR-S
TPR_MalT
DUF2225
TPR_15
SHPRH_helical-1st
DUF6584
TPR_4
RNPP_C
Motif
Other DBs
NCBI-GeneID:
130427122
NCBI-ProteinID:
XP_056610146
EnsemblRapid:
ENSTDLG00000027487
LinkDB
All DBs
Position
8:complement(10830006..10840925)
Genome browser
AA seq
869 aa
AA seq
DB search
MENVHLAPEEEENDLYTGYNDYNPTFDSEDLNNDMGFQQAVKTSYGRRPPMTAKYPGTAI
GGRPIGTAYGEERCQVRKGVRLLQSRMPIGTAIGRPMTGAVQDGAARPMTAVRAAGYSSS
LAKGSAFDPLGQSKGPAPPLETKNDDTPEEKIKIMEKKVNDLIEESCLAHARGDLQQSLE
KAKEAGRKERALVRQREQTDTADHINLDLTYSVLFNLANQYANNDMYTEALNTYQVIVKN
KMFNNAGRLKVNMANIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMG
QYSDAITSFEYIMSESPNIKTGFNLILCYYAIGDRERMKKAFQKLISVPLEIDDEDKNIS
PNDDPHANMVIEAIKNDKLHQMERERKALAEKYIMTSAKLIAPAIESSFAAGFDWCVDIV
KGSQYVELANDLEINKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKD
YDQADRYAELAMSADRYNPAALINKGNTEFVKEDYEKAAEFYKEALRNDSSCTEGLYNLG
LTYKRLGRLEEALDCFHKLHAILRNSAQVMYQLASLYEMLEDPHQAIEWLMQLTSVTPTD
AQVLAKLGDLYDNEGDKTQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFER
ATLIQPTQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPENIECLRFLVRLCTDMGLKE
VQDYATKLKKVEKMKEIREQRVRSGRESSARSRREGSAGSGSSSSPITTPPLRASVSRSE
AKYSPALEQGRDSGQSNHGTSAKGERLSVKLKTLPGSNEPYEASNKQEIDASYVDPLGPQ
IQRPKTAAKKRNEEDDFADEELGDDLLPE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgcatcttgccccagaagaggaggaaaatgacctctatacaggctacaat
gactacaatccaacgtttgactccgaggatctaaacaatgacatgggctttcagcaggca
gtaaagacgagttatggaagaagaccaccaatgacagcaaaatatcctggcactgctatt
ggagggcgaccaattggaacagcttatggagaagaacgctgtcaggtcaggaaaggtgtc
agactcttacagtctcgaatgcctattggtactgcaataggaagaccgatgaccggagct
gttcaggatggtgcagcccgtcccatgactgctgtgcgtgcagcaggatactcttcatca
ctggctaaaggctcagcgtttgatccgctgggacaatcaaaaggaccagcacctccgttg
gagacaaagaatgatgacactccagaggagaagataaagatcatggaaaagaaagtgaat
gatttaatagaggagagctgtctcgcacatgcacgtggggatttacaacagtctctagag
aaagccaaagaggcaggcaggaaggaaagagctctggtgaggcagagagaacaaacagac
actgcagaccacatcaatctggatctgacttactcggtgctgtttaatttagccaaccag
tatgccaataatgacatgtatacagaggccctgaacacttaccaagtcattgtgaagaat
aaaatgttcaataatgccggacgattaaaagtgaacatggcaaatatctatttcaagcaa
aaaaactacacaaaagccatcaagttttatcgcatggctttggatcagatctcaaatgcc
cacaatgcaatgaggataaagatcatgcagaacattggggttgtgttcatacacatgggt
cagtactcagatgccataacctcctttgaatacatcatgagtgagagtcccaacataaag
acagggtttaacctcatcctgtgctactacgccatcggagaccgtgagaggatgaagaaa
gccttccagaaactcatcagtgtgcctcttgagattgatgatgaagacaagaatatctct
ccaaatgatgaccctcatgcaaacatggtaattgaggctataaagaatgataagcttcac
cagatggaaagggagaggaaagccctagcagaaaaatacatcatgacatcagctaagctt
atcgccccagccatagaatcatcattcgcggctgggtttgactggtgtgtagacatagtg
aagggttcacaatatgtggagttggcaaatgacttggagatcaacaaagctattacttac
ttaagacagagggactttaaacaggcagttgagactctgaagatgtttgagaagaaggac
agtcgggtgaaaagtgctgctgctacaaacctttcctttctctactttttggaaaaggat
tatgatcaggctgaccgctatgccgagttggccatgagcgctgaccgctacaaccctgct
gccctcattaacaagggcaacactgagtttgtaaaggaggactatgagaaagcagcagaa
ttttataaggaagctcttcgcaatgattcgtcctgcactgagggtctctataacttaggt
ttgacctataagagacttggtagactagaggaagctctggactgtttccacaagctgcat
gctatcctcagaaacagcgctcaagtcatgtaccagttggccagcctatatgagatgttg
gaggaccctcaccaggccattgaatggctgatgcagctcaccagtgtgacccccacagat
gctcaggtgcttgccaagctgggagatctatatgataatgaaggagataaaacgcaggct
ttccagtactattatgagtcatacaggtattttccctcaaacataagtgtcattgaatgg
ttgggtgcatattacatcgacacccagttctgcgagaaagctattcagtatttcgagaga
gcgacccttattcaaccaacacaggtaaagtggcagctaatggtggccagctgttacaga
agaagtggaaattatcaaaaagcacttgagacctacaaggacattcatcggaaatttcca
gaaaacattgaatgtttgcgcttcctggtcaggctgtgcacagatatgggattaaaagag
gttcaggattatgccaccaaactcaagaaagtcgagaaaatgaaggagatcagagagcag
agggtgaggtctgggagagagagcagcgctcggagtcggagagaaggcagtgctggaagt
gggagcagctcaagccccatcactacccctcctctgagagccagtgtttctcgctctgaa
gctaaatatagccctgcattggaacagggcagagacagtggacagagcaaccatggcacc
agtgccaagggtgagcggctgagtgttaaactgaagacgcttccaggatccaatgagcca
tatgaggccagcaacaagcaggaaatagatgcctcttatgtcgatccgttggggccacaa
atccagagaccgaaaactgctgcaaagaaacgtaatgaggaagatgattttgctgatgaa
gagctgggagatgacttactgcctgagtaa
DBGET
integrated database retrieval system
