Triplophysa dalaica: 130427162
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Entry
130427162 CDS
T09616
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130427162 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130427162 (hdac4)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130427162 (hdac4)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130427162 (hdac4)
BRITE hierarchy
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
130427162
NCBI-ProteinID:
XP_056610233
EnsemblRapid:
ENSTDLG00000007342
LinkDB
All DBs
Position
8:complement(22012093..22167533)
Genome browser
AA seq
1048 aa
AA seq
DB search
MTSPGRPDSSRDQPLELLKSSEFNHIPAVDVSAALPLHLPPSAIPMDLRVDHQLALAPPD
HCEQQLQQELLILKQKQQIQRQRLIEEFQRQHEQLSRQHEVQLQEHVKHQQDLLALKHQQ
ELLEHQRKLERHRQEQELEKHQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLNKKKA
LAQRSLNHCLPSDLRYWYGKTQHSSLDQSSPPQTGISTYNHPLLGMYDPKDDFPLRKTAS
EPNLKLRSRLKQKVTERRSSPLLRRKDGAITSAKKRSLDMAESACSSAPGSGPSSPNNSS
NNITNENGIAGSISHSPAEASLAHRLAGREGPVSQLSLYTSPSLPNITLGLPATGPSSVA
SGQQDGDRLAVPGLQPGMHITTPFLPGAHLPYLTASSLEREGNSAHNSLLQHMVQSATQN
QHVTGLGSMPLQSHPIHKLRQHRPLGRTQSAPLPQNFQALQQLVVQQQHQQFLEKHKQQF
QQQQLHISKMMAKPSEPGRQHESHPEETEEELREHQGMADPTESLPHGVTIKQEPPDEPG
EGFQHRERQAEEEMLFRQVSFEQALLLEQQRIHQLRNYQASMEAAGLSLTFPGHRPLSRA
QSSPASANFPIVAQEPPVKPRFTTGLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIWSRLQ
ETGLRGQCECIRGRKATLEELQTVHTEAHVMLYGTNPLRQKLDSSVTPMFVRLPCGGIGV
DSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFN
SVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYVSLHRYDDGNFFPGSGA
PDEVGAGPGVGFNVNMAFTGGLEPPMGDTDYLAAFRTVVMPIANEFAPDVVLVSSGFDAV
EGHLPPLGGYKLTAKCFGYLTKQLMGLAGGRVILALEGGHDLTAICDASEACVSALLGNE
LDPLPEEVLQERPNSNAVQSMEKVLEVHSKYWRSLQRSASTLGYSLLEAQRCESDEAETV
TAMASLSVANKHMGKRTEEEPMEEEPPL
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcccggccggccagattccagtagagaccagccactggagcttctgaagtca
tctgaattcaaccacattcctgctgttgatgtgagtgccgcactgccactgcacttgccc
ccgtctgccatccccatggatctgcgtgtggatcatcagttggccctggcgcccccggat
cactgcgagcagcagcttcagcaggaactgctgatcctcaaacagaagcagcagatacag
cggcagcggctcatcgaggagttccagcgtcaacacgagcagctctctcgacagcacgag
gtgcagctgcaggagcatgtcaagcatcaacaggacctcctggccctgaaacatcagcag
gaactgttagagcatcagaggaagctggagcgtcatcgtcaggaacaagagctggagaaa
caccagagagagcaaaagcttcagttactcaagaataaagaacgtggccaggagagcgca
gtggcgagcacggaggtgaagatgaggttacaggagtttgtcctgaataagaagaaagct
ctggcacagaggagtctgaaccactgcctgcccagcgacctgcgatactggtatgggaaa
acccagcacagctcccttgaccagagctcgccacctcaaacagggatttccacttacaac
cacccgttgctgggaatgtacgaccccaaagatgacttcccgctgcgcaagacagcttct
gagcccaacctgaagctacgatccagactgaagcagaaagtgacagaacgcaggagtagc
ccgctgttgcggaggaaggacggcgccatcacctctgctaagaaacgctctctcgacatg
gctgaatcggcgtgcagcagtgctcctggttctggtcccagttcacccaacaacagttca
aacaacatcaccaatgagaacggcatcgctggatccatctcccacagtccagcggaggca
tctttggcacacagactcgcgggcagagagggtcctgttagccagctgtctctttacaca
tcaccatcccttcccaacatcactctgggcctgccagccaccggcccttccagcgtggca
tcaggccagcaggatggtgacaggctggcagtgccaggcttgcagccaggaatgcacata
accactccgttcctgccaggggcccacctgccttacctgaccgcctcctccttagagcga
gagggcaactctgcacacaactctcttctccagcatatggtgcagtcagccacacagaac
caacacgtcacgggcctggggagcatgcccctgcagtcacatcccatccacaagcttcga
cagcatcggcccctgggacgcacgcagtcggctcctctgcctcagaactttcaagctctg
cagcagctggtggttcaacagcagcaccagcagttcctcgagaaacacaagcaacagttc
caacagcagcaacttcacatcagcaagatgatggctaagccgagcgagccaggccgacag
cacgagagtcacccggaggagacagaagaagaactgagggaacatcaggggatggccgac
ccgacagagagtcttccccacggggtcaccatcaaacaagaacctccggacgaaccgggt
gaaggattccagcatagagagaggcaggctgaggaagagatgctcttcaggcaggtaagc
tttgagcaagctctcctcttggagcaacagaggatccatcagttgaggaactatcaggcg
tccatggaggcggccgggctctctttgacgttcccagggcatcgacctctgtccagagca
caatcatctccagcctcagccaactttcccatcgtcgctcaggaaccgcccgtcaaacca
cgcttcaccaccggtctggtgtacgacacgctgatgcagaagcaccagtgcatgtgtgga
aacagtaacattcaccccgagcatgcaggccgcatccagagcatctggtcacgcctgcaa
gagacaggactgcgcggtcaatgcgagtgcattcgaggcagaaaagccactttggaggag
ctgcagacggtccacaccgaggctcacgtgatgctgtacggcaccaacccgctccgacag
aaactggacagctcggtgacacccatgttcgtgagactgccgtgcggcggaatcggggtt
gacagtgacacaatctggaatgaagtacactcctccagtgctgctcgtctggccgtgggc
tccgtggtggatctggtgtttaaggtggcgtcaggagagctgaggaatggctttgctgtg
gtaagacctccaggacaccacgctgaggaaagcactccaatgggattttgctacttcaac
tcggtcgccattgcggctaaactcctgcagcagagactgaacgtcagtaagattctgatt
gtcgactgggatgttcaccatggcaacgggacccaacaggccttctacagtgaccctaat
gtcctgtatgtgtctcttcatcgctacgacgacggcaacttctttcctggaagcggagca
cctgacgaggtgggcgccggtccaggtgtgggttttaatgtgaatatggctttcactgga
ggtctggagcctcccatgggggacacggattatctggcagcattcaggacggtggtgatg
ccaatagccaacgagttcgctccagacgtggtgctggtttcttcaggctttgatgctgtg
gaggggcatctgccaccactaggaggatacaaactaacggccaaatgttttggctacctg
accaagcagctgatgggactggccggcggtcgggtgattctcgccctggaggggggtcac
gacctcacggccatttgcgatgcgtctgaagcatgtgtttctgctttgcttggaaacgag
ctggaccctctcccagaagaagtgctacaagagaggccgaactccaacgctgttcagtcc
atggagaaagtgctggaagttcacagtaaatactggcgctcactgcagcgctctgcatcc
actctgggctactcgttgctggaggcgcagcgttgtgaaagcgatgaggcggagaccgtg
accgccatggcctccctgtccgtggccaacaagcacatgggaaagaggacagaggaggag
cctatggaagaagaacctccattgtag
DBGET
integrated database retrieval system
