Triplophysa dalaica: 130427218
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Entry
130427218 CDS
T09616
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130427218 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130427218 (usp9)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130427218 (usp9)
Peptidases and inhibitors [BR:
tdw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130427218 (usp9)
Ubiquitin system [BR:
tdw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130427218 (usp9)
BRITE hierarchy
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Dsc3_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
130427218
NCBI-ProteinID:
XP_056610442
EnsemblRapid:
ENSTDLG00000011257
LinkDB
All DBs
Position
8:16800338..16829748
Genome browser
AA seq
2606 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGDSPAPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKKPINVLKNLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKAEHTDFDPQTVRPGS
RYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMG
DEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDL
ELIGLDYLWRVVIQGSDDIATRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKAS
YDTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHI
TLVVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADD
RKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVESCL
PGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARILMKLMPPDNTTVENLRAICLDHAK
LGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDACDFQYNFLKSGGLPLV
LSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKSVAEACQPVVEGTIPVSP
INQATHDQAIVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAV
QKIVWASGCGSVQHVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALMPTA
LDALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLG
STAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGV
EETILEGHIGVTKELLAFQTPEKKYYIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGE
FPTEQAIPVCSTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPP
VGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSEVDDDMSGDEKQDN
ETNVDPRDEVFGYQHQFEDKPSLSKSEDRKEYNIGVLRQLQVIFGHLAASRLQYFVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQVI
QQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGGEGERNRWYKFDDGDV
TECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSEL
VKYITELTVSSKPHQVKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYLN
SPPGQDHLLPEAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNVR
YWFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSSQ
GCDNLSLSEHLFRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVPATF
MLVALDEGPGPPIKYQYAELGKLYTVVSQLIRCCDVTTRMQSSINGNPALPNPYGDPNIT
APIMPLQQMVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQV
AYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAY
QCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWSPP
VQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEAVSEEDAGRNPSSAQQLLPGE
VTGQPQQTEPDEQEGLDEPETSPPEDTALYPHSPGTKFQQQQNNLPHTQPYTGPAAQHVN
NPQRPGPRAQENWEPTEEVPPSQTKD
NT seq
7821 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctcccctgtgggagggaatgatggtcagggccaggctccg
gatggccagtcccagcctcccctgccccagaaccagacatcctctcccaactcatccaat
gagaactccccagtgagccctccagatgaccagggtcagggggacagtcccgctcctttg
gaggaggaggagccagcttttccccacactgaactggccaagctggatgacatgatcaac
agacctcgttgggttgttccagttttgccaaagggcgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggtcttgatgtcaagtgtgaagcctgccagaggtttttc
agagatgggctgacaatatcctttacgaaaatactgacagatgaggctgtaagcggatgg
aaatttgagatccatcggtgcatcattaataatgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggttccctctgctagaactactagccatggccaccaacccc
cactgtaaatttcacatctacaatggtactcggccctcggagactgtgcctgccggggtt
cagctggctgaggatgagctgttcgcccgtccacctgaccctcgttctccaaagggctgg
ttggtggacttaataaacaaatttggcacattaaacgggtttcaaattctgcatgatcga
ttcatgagtggccaagctctgaatgttcagatcattgctgcactcattaagccttttgga
cagtgctatgagtttctcactttgcacacagtgaagaagtacttccttcccatcatagaa
atggttcctcagtttctagaaaacctcactgatgaggaattgaaaaaggaggccaagaac
gaagccaaaaatgatgccctgtctatgataatcaaatcgttgaagaacctggcctctcga
gtaccaggacaagaagaaaccgtgaagaatttagagatatttaggttaaaaatgattctt
aggttattgcagatttcttcttttaatggtaaaatgaatgcactaaatgaagtaaacaag
gtgatctcgagtgtgtcctattacactcatcgccacggcaatcccgaagaggaggagtgg
cttacagcagaacgcatggcagaatggattcagcagaacaatattttgtctattgtgctg
cgagacagccttcatcagccacagtatgtggagaaactagagaagatcctgcgcttcgtc
atcaaagaaaaggccctgacgctgcaggacctggacaacatctgggctgctcaggctggg
aagcatgaggctatcgtcaagaatgttcatgatctccttgctaaactggcttgggatttc
tcacctgaacagctggaccatctcttcgactgcttcaaggagagctggactaacgcaagt
aaaaagcagagggagaaattattagaattgattcgtcgactagcagaggatgacaaggat
ggcgtgatggctcacaaagtgctcaatctgctgtggaatctggcccatagtgatgatgtt
cctgtggatattatggaccaggcccttagtgctcatatcaaaattttggactatagctgc
tcacaggacagagatactcagaagatgcaatggatagatcgatttatagaagaattgaga
acaaatgacaaatgggttattcctgcactgaaacaaattcgggagatctgcagccttttt
ggagaagccccccagaacttaagaaagaaaaaacctataaacgtactaaagaacttagag
ggtcaaacgcagaggagcccacatgtgttctatcggcacgacctgataaaccaactacag
cacaaccatgctctggtcactcttgtagcagagaacctgtcagcatacatggagaatatg
aggcagttttctaaagcagagcacacggactttgatcctcagacggttaggccaggaagt
cggtatagtcatgtgcaggaggtccaggaacgactcaatttcttgagattcttacttaaa
gatggtcagctctggttatgtgcgcctcaggccaagcagatctggaagtgcctggcggag
aacgcagtgttcttgtgtgatcgggaggcctgcttcaaatggtactccaaactcatgggg
gatgagccggaccttgaccccgacatcaacaaggacttctttgagaacaacgtgctgcag
cttgatccctcgctgctgactgagaacggcatgaagtgctttgaacgattctttaaagcg
gtcaactgcagggagggcaaactggtggcgaaacgccgggcgtacatgatggacgatctg
gagctgatagggctggattacctgtggagggttgtgatccaaggaagtgatgacattgcc
accagagcaattgacttacttaaagagatttacacaaaccttggaccaaaattacaagcc
aatcaggtagagatccatgaggatttcattcagtcttgttttgaccggctcaaagcctcc
tatgacactctgtgtgtgttggatggtgacaaagacagcattaactgtgccagacaggag
gccatccgcatggtgcgagtactgactgtactcagggagtatataactgagtgtgacagc
gactaccatgaggagaggaccatactgcccatgtccagggcgttccgtggaaagcatatc
acgctagttgtgcgtttcccaaaccaaggccggcaagttgatgacctggatatttggtct
cacacaaatgacacgattggttccgtgcgacgctgtattctgaaccgaataaaggccaac
agcacgcacaccaagatcgagctgttcatcgggggagagatcatagacccagcagacgac
aggaagctaattgggcagctaaacctcaaagacaaaactcttatcacagccaagctcacc
caggtcagcgccaatatgccttccagtccagacagctcctcagactcctccaccggctct
ccagggaaccatgggaaccacttcagcgatgggccaaaccctgaagtggaaagctgtctt
ccgggtgtgataatgtccctgcacctgcgctacatctcgttcctctggcaagttgcggat
ctgggctgtaatctcaacatgcctctcctacgggatggagctcgcattctaatgaagctc
atgcctccagataacaccacggtagaaaacctgcgggctatttgtctggatcatgccaaa
cttggagaaaacagccttagccccacgttggactctcgtttctttggcccatcgccgtct
caagtgctttacctgatagaggtggtgtatgccttgctcatgcctgctagcggaacatta
ggcgaggatgcttgtgacttccagtacaacttcttgaagagtggcggcttgccgctggtt
ttgagcatgctcaccagaaataacttcctgccaaatgctgacatggagacccgacgggga
gcgtatctcaacgcgctaaaaatagccaaacttctgctcacagctgtaggctttggccat
gtaaagtccgtagcggaggcctgccagcctgtggtggaagggactatccctgtgtcgccc
ataaaccaggccactcatgaccaggctatagtgctccagaacgccctgcagaacatccct
aacccctctgcagagtgcatgctacggaatgtggccatccgccttgcccagcagatctct
gatgagaactttttccaggcctccaagtacatcccggatatctgtgtcattcgagctgtt
cagaagatagtgtgggcttctggatgtggctctgtccaacacgtcttcagctcgaacgag
gagatcagcaagatctacgagaagaccaatgcgggcaatgagccggatgcagaggatgag
caggtgtgctgtgaagctctggaggtcatgactctttgtttcgccctcatgcccactgca
cttgatgcacttagcaaagagaaggcctggcagacctttattatagatctgctgctgcac
tgccagagcaagtctgttcgtcaaatggctcaggaacagttcttcctcatggccaccaga
tgttgtatgggccataggcctctactcttctttatcacccttctctttacagttttaggt
agcacggcaaaagagcgagcgaagcacgccgctgattacttcactcttctgaggcactta
ctcaactatgcatataatagcaacattaaccttcctaatgcagaagttctcttgaacaat
gagattgactggttaaaacgaatccgggatgaagttaagaggactggggagcctggggtg
gaggagaccattttggaaggtcatattggtgtcacaaaagagctgttggcctttcagacc
cctgagaagaagtactacattggttgtgaaaaaggaggagcgagtctcataaaggagtta
atggatgacttcctgttcccagcatctaatgtctatcttcaatatatgaagagcggagag
ttccccacggagcaggccatacctgtgtgcagcacccctgccactatcaatgccggcttc
gaactgctggtcgcacttgccgttggatgtgtgcgaaatctcaagcagattgtcgatacc
ttaactgatatgtactacttaggttgtgaaccacttacagaatgggagtacctgccaccg
gttggtccgcggcctactaagggttttgtgggcctgaaaaatgcaggcgcgacttgctac
atgaactctgtgatccagcagctctacatgattccacccatcaggaacggcattttggcc
atcgagggcacaggcagtgaggtggatgatgacatgtctggagatgagaaacaagataat
gagactaacgtggatccacgggatgaggtgtttggttatcagcaccagtttgaagacaaa
ccttcactcagtaaatctgaggacaggaaggagtataacattggggttctgcgccagctc
caggtcatctttgggcatttggccgcctcaagattgcagtactttgtgcctagaggattc
tggaaacaatttcgattgtggggggaaccagtcaatctgagggaacagcacgatgcccta
gagttcttcaactcattggtggacagtttagatgaagctttgaaagcattgggtcaccct
gccatgctgagtaaagttctgggcggctcatttgcagatcagaaaatatgtcagggctgt
cctcacaggtatgaatgtgaggaatcatttacgacgttgaatgtagatatccgaaaccat
cagaatctcctcgattccatggagcaatatgtgaaaggggacttattggagggtgcaaat
gcctaccactgtgagaaatgcaacaagaaggtggacacagtgaagcgtttactcattaag
aagctgcctccggtgctggccatccagctcaaacgcttcgattatgactgggaacgagag
tgtgccatcaagttcaatgactactttgagttcccaagggagttggacatggaaccctac
acagtggctggagtagctaagctggagggatctgatgtgcatccagagaatcaggtgatt
caacagaacgagccttcagagccggaacccccctgcagctcccgttatcgtttggtgggc
gtgttggtccactcgggccaggctagcggaggtcactactactcctacatcattcagagg
aatggcagcggtggtgagggagagaggaaccgctggtacaagtttgacgacggcgatgtc
acagagtgcaagatggacgacgacgaggagatgaagaaccagtgcttcggaggagagtac
atgggtgaggtcttcgaccacatgatgaagcgcatgtcctacaggagacagaagcgctgg
tggaacgcctacattctcttttacgagcgcatggacactctggacaaggacagcgagctg
gtgaaatacatcactgagctcacagtgtccagtaaacctcaccaggtgaaaatgccgtct
gctatcgaacgcagcgtgcgcaaacagaacgtgcagttcatgcacaaccgtatgcagtac
agcctcgagtacttccagtttataagaaaactgctgacctgtaacagcgtgtacttgaac
tcaccgccaggtcaagaccaccttttacctgaagcagaagagatggctatgataagtata
cagctcgctgctagatttctgtttagtactggattccacaccaagaaaatagtcagaggc
cctgctagtgattggtatgatgcgctgtgcatcttgcttcgacacagtaagaacgtgcgt
tactggtttgcgcacaacgtcctcttcgcgtatccgaaccgcttctcagagtacctgctc
gagtgccccagcgctgaggtacgaggagccttctctaaactcatcgtattcattgcacat
ttctccctgcaagatggaccttgcccttcaccgattgcctcacctggaccttcaagtcag
ggctgtgacaacttgagtttaagtgaacatctgttccgtgctgtgctcaacctgctgagg
agggaagtgtctgaacacggccgtcacttgcagcagtactttaacctcttcgttatgtac
gccaaccttggtttagcagagaagacacagctcctgaagctcggtgtgccagccaccttc
atgcttgtggctctggatgagggtcctgggcctccaatcaagtaccagtacgctgaactg
ggaaagctctatactgtagtgtcgcagctcatccgctgttgtgatgtaacaacgcgtatg
cagtcttcaatcaacggtaaccctgccctaccaaacccatatggtgaccccaacatcaca
gctcccatcatgcctctgcagcagatggtggtcgacatcctgtttgtgcgcaccagctat
gtaaagaagattatcgaggactgcagtaactctgaggacaccatcaaactgctgaggttc
tgctgttgggagaaccctcagttttcatccactgtgctaagtgaactcctgtggcaggtg
gcgtattcctacacgtatgagttaaggccttacttggacttgcttctccaaatcctgttc
atagaggactcatggcagactcacaggatccacaacgtgctaaagggaattcctgatgac
cgtgatgggcttttcgacaccattcaacgctccaaaaaccactaccaaaagagagcttat
cagtgtatcaaatgcatggtggctctgttcagtaactgctctgtggcctatcagattctg
cagagtaatggtgatctaaagaggaagtggacatgggcggttgagtggctcggggatgag
ttggaacgaaggccgtacactggcaatacccagtacacgtataacaactggtcccctcct
gtccagagcaacgagacgtctaacggatatttcctggagcgttctcacagtgcccgcatg
actttagccaaggcctgcgagttgtgcccggaggagtgtcacttaacgaagcacgaggcg
gtatctgaagaggacgcaggccggaacccgtcctctgcacagcaacttttgccaggggaa
gtgacaggccagccacagcaaaccgagcctgatgagcaggagggactcgatgagccggaa
acttctccaccggaggacaccgctctgtaccctcattctccaggcacaaaatttcaacaa
cagcagaataacctcccacatacgcagccatacaccggccccgcagcacaacatgtcaac
aaccctcagcgtccaggcccacgagcacaagagaactgggagcccactgaggaagtgccg
ccgagccagactaaagactaa
DBGET
integrated database retrieval system
