Triplophysa dalaica: 130427254
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Entry
130427254 CDS
T09616
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130427254 (stxbp5l)
Membrane trafficking [BR:
tdw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130427254 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
130427254 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Synaptobrevin
Beta-prop_DCAF4
Lgl_C
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
130427254
NCBI-ProteinID:
XP_056610518
LinkDB
All DBs
Position
8:complement(14050582..14167163)
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AA seq
1270 aa
AA seq
DB search
MKKFRKVLDGLTTSTPVNPGGSPVCGSAAGTPSAAHTPRDLEIHETLMSEHFQICKTVRH
GFPYQPTALAFDPVQKILAIGCRSGGVRVLGGPGVDCHCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLVGYEGGTIVMWDLRAKRADFRI
YYDEAIHSVSWHHEGRQFMCSHSDGSLSMWNLRNTAKPFQVTFPHGKTQRDGKKESCKPI
LKVEYKTSRNSSDAFVVFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFIVLCETP
YLNEVQEPYAVVVLLEKDFVVVDLTQSNFPIFENPYPMDVHESPVTCTAYFADCPPDIIP
VLYSIGAKHKKTGYSHKDWPVSGGVWNVGSQTYPEIIITGHADGSIKFWDATAIPPLSVT
LQMLYKLKTSKVFEKPKTGEMGRSAELVEEDPYAVQMITWCPQSRIFCVVGISAHVILYR
FSKNDANTSITSLEVRLQCEMEDVISPSDTENTPCFSDPSGHSPQLHSPRSNTPDSVRDS
IPCLKVKDRMIRMPPGYQAELVLQLLWVDGEPPQQITSLDLNSAYGLLALGNCNGLAVVD
YLQKTVLLCMSTVELYGSADPFQRLTRSPRKNRQSTSDFCMRGLSNFYSDSKKRIRTSYQ
SLTELSDNQVSLDLERSKSPTSAPYSPSLHNDPRGTGEPVSNLRSCHYSPVFYLLDNVKG
PGRKLSLPTDLKTDLDHVNGHCTSPTSQPCAPGRARVPGGPEGARLARRGPGRPPFRKAQ
SAACMEVSLPVSSLTEGYPSRRAMLQQLHGVSMYSHDEHHSTTYSWSERESRENSFSRSR
SSSVSSIDRETKEAVTTVQFAESYGRKSDSLPTPCLWVGTSLGLVLIIPISIPMDEQERL
EDPVTVAPTGTVLMLKGSVLRFGFLDCGGALIQNPCEMWRDQHAPEDPDRPRKRKLVNFS
PSSSQEASGDGHLAVVCSERQAKVFFMPSQACLYVHNITESSFVLRADIVSVCNSVCLAC
FCANGHIMTLSLPSLRPLLDISYLPLTDMRIARTFCFTNGGQALYLCSPTEIQRITYSQE
MCDNLQEMLGELFTPIETPEAQNRGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHI
PGQGGMEGMKAAAGGVVGELARARIALDERGQRLGELEDRTALMMSSADTFSKHAHELML
KCKDKKWYQF
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaggaaggttttggacgggctgacgacttctacgcctgtcaatccaggt
ggatctccagtgtgcggcagtgcggccgggacccccagtgcggcacatactccacgggat
ctggagatccatgaaacgctgatgtcagagcacttccagatctgtaagacggtgcgtcat
ggattcccttatcagcccacagctctggcatttgacccagtgcagaagatccttgccatt
ggctgtcgttctggaggagtacgagttctgggagggccaggagtggactgccattgccag
catgagagtggggcagcagttctccaactgcagtttctcatcaacgagggggcgctggtc
acagcctgtgcagatgacacactgcatctctggaacctgcgacagcgacggccagctatt
cttcactctcttaaattcaacagagagcgcatcacattctgtcatcttccgtttcaaagt
aaatggctgtacgtggggacggagcgtggaaatacacacatagtgaacatcgaatccttc
gtcttgtctggatatgtcattatgtggaacaaggctatagaactatcaacaaagacgcat
ccagggcctgttgttcatctgagtgacagtccaaaagatgagggaaagttactggtaggt
tatgagggcggaacaatagtaatgtgggacctgagggccaaaagagccgacttcagaata
tattatgatgaggccattcactcagtaagctggcatcacgaagggcgtcagttcatgtgc
agtcattccgatggcagtttaagcatgtggaatctgagaaacacggctaaaccttttcaa
gtcaccttccctcatggcaagacacagagagacggtaaaaaagaatcgtgtaaacccatc
ctcaaagtcgaatacaagacctcaagaaacagtagcgacgctttcgtcgtgttctctggg
ggtctgtcgtatgataaggcaggacggagacccaccctcaccatcatgcatggcaaagcc
attacagtcttagagatggactacccaatagtggaattcattgtgctctgtgagacgccc
tatctgaacgaggttcaggagccatatgctgtggtggttctgctggagaaagatttcgtt
gtggtggatctaactcagagcaactttcccatctttgagaacccgtaccctatggacgtc
catgagtctccagtcacgtgcacggcttactttgccgactgtccccctgacatcataccg
gtgctttattccataggagccaaacacaaaaagacaggctatagccacaaggattggccg
gtcagtggtggcgtatggaatgttgggtcacagacgtatccagagattatcatcacaggg
catgcagacggatcgataaagttctgggatgccacagcgattccgcctctatcagtcaca
ctgcagatgttgtataagctcaagacatcaaaagtgtttgagaagccaaaaactggagag
atggggcgaagcgctgagctggtggaggaagacccttatgctgttcagatgatcacttgg
tgcccacagagtcgtatcttctgcgtggtgggcatcagtgcccatgtcatcttgtaccgc
ttcagcaagaacgacgccaacacctccatcacatctctagaggtgcggctacagtgcgag
atggaagacgtaatctctccctcagatacagaaaacaccccttgtttctctgaccccagc
ggccattcgccccagctccacagtccccgcagcaatacaccggacagtgtacgggacagc
atcccctgccttaaggttaaagatcgaatgatccggatgcctcctgggtaccaggcggag
cttgtgcttcagttactatgggtagatggcgagcctccacaacaaatcaccagcctggat
ttaaactctgcttacggcttgttggctctaggtaactgcaatggtttggcagttgtggac
tacctgcagaaaactgtcctcctgtgcatgagcactgtggaactgtatggatctgcggac
cctttccaaagactaacacgctctcctcggaaaaaccggcagtccacatcagacttttgc
atgcgcggcctgtctaacttttattcagattcaaagaaacggatccgtacttcttaccag
agccttacagagctttctgataatcaggtttctttggacttggagaggagcaagtcaccc
acctcagcaccctactccccttccctccataatgacccacgaggcacaggagaacctgtg
tccaacctccggtcctgccactacagtccggtcttttatctgctggacaatgtaaaggga
ccaggcagaaagttaagtctacccacagatcttaagactgatcttgatcatgtgaatgga
cattgcactagccccacctcccagccctgtgcgcctgggagggccagagtcccggggggg
cccgaaggtgcacgcctcgcccgcagagggcccggccgaccacccttccgcaaggcccag
tctgcggcatgcatggaggtctctttgcctgtatcctccctcaccgaaggttatccgtcc
cgacgggccatgctgcagcagttacatggagtcagtatgtactctcacgatgagcatcac
agcaccacctactcctggagcgagagagagagccgagaaaactcgttcagtcgttcaagg
agctccagcgtttccagcatagacagagagacgaaagaggccgtaaccactgtgcagttt
gcagagtcgtatgggcgtaagtcagacagcctgccaacgccctgcctctgggtggggacg
agtctgggcctggtgctcatcatcccaatatccatacctatggatgagcaggaacgtctt
gaagacccggttactgtggcacccactggaaccgtgttaatgctcaagggctccgttctg
cggtttggcttcctggattgtgggggcgcactaattcaaaatccctgcgagatgtggcgg
gaccaacatgccccagaagacccagatcgaccccgcaaacggaagctggtcaacttctcg
ccctcctcctcccaagaggccagtggagatggtcacttagccgttgtgtgttcggagagg
caggcaaaggtcttcttcatgccttcccaggcttgtctctacgtgcacaacatcacagaa
tcatccttcgtgttgcgtgctgacatagtgtccgtgtgtaacagcgtgtgtctggcctgc
ttctgcgccaatggacacatcatgactctcagccttccaagtttacgacctctgctagac
atcagctacctgccgcttacagacatgcgcattgccaggaccttctgcttcacgaacgga
ggacaggcgctgtatctgtgctcccctacagagatacagagaatcacttacagccaggag
atgtgtgacaacctacaggagatgttaggggaactctttacacctattgaaactcctgag
gctcagaaccgtggctttcttaagggcttttttggcggcaacgcccaaacgttcgaccga
gaagagctgttcggtgaggcagcggcaggtaaggcctcccgcagcctggcccagcacatt
ccaggacaggggggtatggagggcatgaaggcagcagcaggcggggtggtgggggaactg
gcccgagctcgaattgccctggatgagagaggacagaggctaggagagctggaggacaga
actgccctcatgatgtctagtgctgataccttctcaaaacatgctcacgagctaatgttg
aaatgcaaagacaagaagtggtatcagttttag
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